RNA–Protein interactions for RNA: ENST00000376643.6

HDAC6-204, Transcript of histone deacetylase 6, humanhuman

TSL 5

Gene HDAC6, Length 907 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-204ENST00000376643 CACNG1Q06432 222 aa14.34□□□□□ -0.11
HDAC6-204ENST00000376643 GPR19Q15760 415 aa14.34□□□□□ -0.11
HDAC6-204ENST00000376643 PARP6Q2NL67 630 aa14.34□□□□□ -0.11
HDAC6-204ENST00000376643 ZRANB3Q5FWF4 1079 aa14.34□□□□□ -0.11
HDAC6-204ENST00000376643 DUS1LQ6P1R4 473 aaKnown RBP14.34□□□□□ -0.11
HDAC6-204ENST00000376643 LINC00523Q86TU6 105 aa14.34□□□□□ -0.11
HDAC6-204ENST00000376643 GPR135Q8IZ08 494 aa14.34□□□□□ -0.11
HDAC6-204ENST00000376643 TMEM102Q8N9M5 508 aaPredicted RBP14.34□□□□□ -0.11
HDAC6-204ENST00000376643 SPDYE1Q8NFV5 336 aaPredicted RBP14.34□□□□□ -0.11
HDAC6-204ENST00000376643 STYXQ8WUJ0 223 aa14.34□□□□□ -0.11
HDAC6-204ENST00000376643 IP6K3Q96PC2 410 aa14.34□□□□□ -0.11
HDAC6-204ENST00000376643 APOL2Q9BQE5 337 aa14.34□□□□□ -0.11
HDAC6-204ENST00000376643 NLNQ9BYT8 704 aa14.34□□□□□ -0.11
HDAC6-204ENST00000376643 ING2Q9H160 280 aa14.34□□□□□ -0.11
HDAC6-204ENST00000376643 EPN1Q9Y6I3 576 aaPredicted RBP14.34□□□□□ -0.11
HDAC6-204ENST00000376643 IGLV3-16A0A075B6K0 115 aa14.33□□□□□ -0.12
HDAC6-204ENST00000376643 SLC9B1P1A6NJY1 282 aa14.33□□□□□ -0.12
HDAC6-204ENST00000376643 E7EQ34 232 aa14.33□□□□□ -0.12
HDAC6-204ENST00000376643 LIN7AO14910 233 aaPredicted RBP14.33□□□□□ -0.12
HDAC6-204ENST00000376643 DPM1O60762 260 aa14.33□□□□□ -0.12
HDAC6-204ENST00000376643 PRDX3P30048 256 aaKnown RBP14.33□□□□□ -0.12
HDAC6-204ENST00000376643 SHMT2P34897 504 aa14.33□□□□□ -0.12
HDAC6-204ENST00000376643 NSG1P42857 185 aa14.33□□□□□ -0.12
HDAC6-204ENST00000376643 ITGA1P56199 1179 aa14.33□□□□□ -0.12
HDAC6-204ENST00000376643 ITIH4Q14624 930 aa14.33□□□□□ -0.12
HDAC6-204ENST00000376643 PTPRCAPQ14761 206 aa14.33□□□□□ -0.12
HDAC6-204ENST00000376643 IGFBP7Q16270 282 aa14.33□□□□□ -0.12
HDAC6-204ENST00000376643 LYPLAL1Q5VWZ2 237 aa14.33□□□□□ -0.12
HDAC6-204ENST00000376643 MED25Q71SY5 747 aa14.33□□□□□ -0.12
HDAC6-204ENST00000376643 TAS2R42Q7RTR8 314 aa14.33□□□□□ -0.12
HDAC6-204ENST00000376643 AMIGO1Q86WK6 493 aa14.33□□□□□ -0.12
HDAC6-204ENST00000376643 RAB43Q86YS6 212 aa14.33□□□□□ -0.12
HDAC6-204ENST00000376643 KLHDC8BQ8IXV7 354 aa14.33□□□□□ -0.12
HDAC6-204ENST00000376643 DSELQ8IZU8 1212 aa14.33□□□□□ -0.12
HDAC6-204ENST00000376643 OR13C4Q8NGS5 318 aa14.33□□□□□ -0.12
HDAC6-204ENST00000376643 CCDC110Q8TBZ0 833 aa14.33□□□□□ -0.12
HDAC6-204ENST00000376643 UBE2Q2Q8WVN8 375 aa14.33□□□□□ -0.12
HDAC6-204ENST00000376643 TLR10Q9BXR5 811 aa14.33□□□□□ -0.12
HDAC6-204ENST00000376643 PITPNM3Q9BZ71 974 aa14.33□□□□□ -0.12
HDAC6-204ENST00000376643 ACTR5Q9H9F9 607 aaPredicted RBP14.33□□□□□ -0.12
HDAC6-204ENST00000376643 NLE1Q9NVX2 485 aaPredicted RBP14.33□□□□□ -0.12
HDAC6-204ENST00000376643 POLG2Q9UHN1 485 aa14.33□□□□□ -0.12
HDAC6-204ENST00000376643 AP1M2Q9Y6Q5 423 aa14.33□□□□□ -0.12
HDAC6-204ENST00000376643 BSNQ9UPA5 3926 aa14.33□□□□□ -0.12
HDAC6-204ENST00000376643 PTPN13Q12923 2485 aa14.32□□□□□ -0.12
HDAC6-204ENST00000376643 TRBV5-4A0A0C4DH59 114 aa14.32□□□□□ -0.12
HDAC6-204ENST00000376643 TTLL8A6PVC2 850 aa14.32□□□□□ -0.12
HDAC6-204ENST00000376643 ERI2A8K979 691 aaKnown RBP14.32□□□□□ -0.12
HDAC6-204ENST00000376643 TMEM150CB9EJG8 249 aa14.32□□□□□ -0.12
HDAC6-204ENST00000376643 LDB2O43679 373 aa14.32□□□□□ -0.12
HDAC6-204ENST00000376643 CA5AP35218 305 aa14.32□□□□□ -0.12
HDAC6-204ENST00000376643 PPARGP37231 505 aaPredicted RBP14.32□□□□□ -0.12
HDAC6-204ENST00000376643 TMPRSS15P98073 1019 aa14.32□□□□□ -0.12
HDAC6-204ENST00000376643 GPS2Q13227 327 aa14.32□□□□□ -0.12
HDAC6-204ENST00000376643 PAPD7Q5XG87 772 aaKnown RBP14.32□□□□□ -0.12
HDAC6-204ENST00000376643 PEX26Q7Z412 305 aa14.32□□□□□ -0.12
HDAC6-204ENST00000376643 SERPINA9Q86WD7 417 aa14.32□□□□□ -0.12
HDAC6-204ENST00000376643 GALNT11Q8NCW6 608 aa14.32□□□□□ -0.12
HDAC6-204ENST00000376643 TFGQ92734 400 aaPredicted RBP14.32□□□□□ -0.12
HDAC6-204ENST00000376643 GORASP1Q9BQQ3 440 aa14.32□□□□□ -0.12
HDAC6-204ENST00000376643 TSSK1BQ9BXA7 367 aa14.32□□□□□ -0.12
HDAC6-204ENST00000376643 CHST8Q9H2A9 424 aa14.32□□□□□ -0.12
HDAC6-204ENST00000376643 OR52A5Q9H2C5 316 aa14.32□□□□□ -0.12
HDAC6-204ENST00000376643 AMFRQ9UKV5 643 aa14.32□□□□□ -0.12
HDAC6-204ENST00000376643 TCFL5Q9UL49 500 aa14.32□□□□□ -0.12
HDAC6-204ENST00000376643 CLEC18AA5D8T8 446 aa14.31□□□□□ -0.12
HDAC6-204ENST00000376643 ARGFXA6NJG6 315 aa14.31□□□□□ -0.12
HDAC6-204ENST00000376643 SGTAO43765 313 aa14.31□□□□□ -0.12
HDAC6-204ENST00000376643 TMEM63AO94886 807 aa14.31□□□□□ -0.12
HDAC6-204ENST00000376643 GP1BBP13224 206 aa14.31□□□□□ -0.12
HDAC6-204ENST00000376643 RORAP35398 523 aa14.31□□□□□ -0.12
HDAC6-204ENST00000376643 VAV2P52735 878 aa14.31□□□□□ -0.12
HDAC6-204ENST00000376643 SRSF1Q07955 248 aaKnown RBP eCLIP14.31□□□□□ -0.12
HDAC6-204ENST00000376643 MSLNQ13421 630 aaPredicted RBP14.31□□□□□ -0.12
HDAC6-204ENST00000376643 PLEKHS1Q5SXH7 462 aa14.31□□□□□ -0.12
HDAC6-204ENST00000376643 DENND5AQ6IQ26 1287 aa14.31□□□□□ -0.12
HDAC6-204ENST00000376643 FAM199XQ6PEV8 388 aaPredicted RBP14.31□□□□□ -0.12
HDAC6-204ENST00000376643 CLEC18BQ6UXF7 455 aa14.31□□□□□ -0.12
HDAC6-204ENST00000376643 CERS6Q6ZMG9 384 aa14.31□□□□□ -0.12
HDAC6-204ENST00000376643 KIAA1328Q86T90 577 aa14.31□□□□□ -0.12
HDAC6-204ENST00000376643 TMEM135Q86UB9 458 aa14.31□□□□□ -0.12
HDAC6-204ENST00000376643 SYTL1Q8IYJ3 562 aa14.31□□□□□ -0.12
HDAC6-204ENST00000376643 ENDOVQ8N8Q3 282 aaKnown RBP14.31□□□□□ -0.12
HDAC6-204ENST00000376643 CLEC18CQ8NCF0 446 aa14.31□□□□□ -0.12
HDAC6-204ENST00000376643 OR52E1Q8NGJ3 308 aa14.31□□□□□ -0.12
HDAC6-204ENST00000376643 DENND1AQ8TEH3 1009 aa14.31□□□□□ -0.12
HDAC6-204ENST00000376643 TCTN2Q96GX1 697 aa14.31□□□□□ -0.12
HDAC6-204ENST00000376643 MRFAP1L1Q96HT8 127 aa14.31□□□□□ -0.12
HDAC6-204ENST00000376643 DNAJC1Q96KC8 554 aaKnown RBP14.31□□□□□ -0.12
HDAC6-204ENST00000376643 SLC29A3Q9BZD2 475 aa14.31□□□□□ -0.12
HDAC6-204ENST00000376643 CHRNA10Q9GZZ6 450 aa14.31□□□□□ -0.12
HDAC6-204ENST00000376643 C10orf88Q9H8K7 445 aa14.31□□□□□ -0.12
HDAC6-204ENST00000376643 MLXIPLQ9NP71 852 aa14.31□□□□□ -0.12
HDAC6-204ENST00000376643 ACTR10Q9NZ32 417 aa14.31□□□□□ -0.12
HDAC6-204ENST00000376643 OR6C2Q9NZP2 312 aa14.31□□□□□ -0.12
HDAC6-204ENST00000376643 SRPK3Q9UPE1 567 aa14.31□□□□□ -0.12
HDAC6-204ENST00000376643 PLAAQ9Y263 795 aa14.31□□□□□ -0.12
HDAC6-204ENST00000376643 MAST4O15021 2626 aa14.31□□□□□ -0.12
HDAC6-204ENST00000376643 BTN3A1O00481 513 aa14.3□□□□□ -0.12
HDAC6-204ENST00000376643 AP2A1O95782 977 aa14.3□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms