RNA–Protein interactions for RNA: ENST00000376387.4

TM9SF2-201, Transcript of transmembrane 9 superfamily member 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TM9SF2, Length 3,430 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF2-201ENST00000376387 POMZP3Q6PJE2 187 aa11.32□□□□□ -0.6
TM9SF2-201ENST00000376387 PGBD5Q8N414 524 aa11.32□□□□□ -0.6
TM9SF2-201ENST00000376387 CAPSLQ8WWF8 208 aa11.32□□□□□ -0.6
TM9SF2-201ENST00000376387 S100ZQ8WXG8 99 aa11.32□□□□□ -0.6
TM9SF2-201ENST00000376387 YIPF6Q96EC8 236 aa11.32□□□□□ -0.6
TM9SF2-201ENST00000376387 CGREF1Q99674 301 aa11.32□□□□□ -0.6
TM9SF2-201ENST00000376387 KLHL3Q9UH77 587 aa11.32□□□□□ -0.6
TM9SF2-201ENST00000376387 ADGRE2Q9UHX3 823 aa11.32□□□□□ -0.6
TM9SF2-201ENST00000376387 TMEFF2Q9UIK5 374 aaPredicted RBP11.32□□□□□ -0.6
TM9SF2-201ENST00000376387 TSR3Q9UJK0 312 aaKnown RBP11.32□□□□□ -0.6
TM9SF2-201ENST00000376387 PCDHGA10Q9Y5H3 936 aa11.32□□□□□ -0.6
TM9SF2-201ENST00000376387 COL1A2P08123 1366 aa11.32□□□□□ -0.6
TM9SF2-201ENST00000376387 UBA6A0AVT1 1052 aaPredicted RBP11.31□□□□□ -0.6
TM9SF2-201ENST00000376387 KCNK2O95069 426 aa11.31□□□□□ -0.6
TM9SF2-201ENST00000376387 ATXN1LP0C7T5 689 aaKnown RBP11.31□□□□□ -0.6
TM9SF2-201ENST00000376387 ERVK-8P63133 956 aa11.31□□□□□ -0.6
TM9SF2-201ENST00000376387 GALNT3Q14435 633 aa11.31□□□□□ -0.6
TM9SF2-201ENST00000376387 ATP6AP1LQ52LC2 224 aa11.31□□□□□ -0.6
TM9SF2-201ENST00000376387 XKR4Q5GH76 650 aa11.31□□□□□ -0.6
TM9SF2-201ENST00000376387 TJAP1Q5JTD0 557 aa11.31□□□□□ -0.6
TM9SF2-201ENST00000376387 ANKS6Q68DC2 871 aa11.31□□□□□ -0.6
TM9SF2-201ENST00000376387 MOB2Q70IA6 237 aa11.31□□□□□ -0.6
TM9SF2-201ENST00000376387 C10orf111Q8N326 155 aa11.31□□□□□ -0.6
TM9SF2-201ENST00000376387 PIK3C3Q8NEB9 887 aa11.31□□□□□ -0.6
TM9SF2-201ENST00000376387 TSPEARQ8WU66 669 aa11.31□□□□□ -0.6
TM9SF2-201ENST00000376387 SLC47A1Q96FL8 570 aa11.31□□□□□ -0.6
TM9SF2-201ENST00000376387 HMCESQ96FZ2 354 aa11.31□□□□□ -0.6
TM9SF2-201ENST00000376387 ZNF300Q96RE9 604 aaPredicted RBP11.31□□□□□ -0.6
TM9SF2-201ENST00000376387 MYOCQ99972 504 aa11.31□□□□□ -0.6
TM9SF2-201ENST00000376387 TMLHEQ9NVH6 421 aa11.31□□□□□ -0.6
TM9SF2-201ENST00000376387 MTPAPQ9NVV4 582 aaKnown RBP eCLIP11.31□□□□□ -0.6
TM9SF2-201ENST00000376387 VNN3Q9NY84 501 aa11.31□□□□□ -0.6
TM9SF2-201ENST00000376387 DNAJB9Q9UBS3 223 aa11.31□□□□□ -0.6
TM9SF2-201ENST00000376387 EIF2B4Q9UI10 523 aaKnown RBP11.31□□□□□ -0.6
TM9SF2-201ENST00000376387 ATP11BQ9Y2G3 1177 aa11.31□□□□□ -0.6
TM9SF2-201ENST00000376387 GLP2RO95838 553 aa11.31□□□□□ -0.6
TM9SF2-201ENST00000376387 HPRP00739 348 aa11.31□□□□□ -0.6
TM9SF2-201ENST00000376387 RPS17P08708 135 aaKnown RBP11.31□□□□□ -0.6
TM9SF2-201ENST00000376387 ACVR2AP27037 513 aa11.31□□□□□ -0.6
TM9SF2-201ENST00000376387 PSMB9P28065 219 aa11.31□□□□□ -0.6
TM9SF2-201ENST00000376387 S100A5P33763 92 aa11.31□□□□□ -0.6
TM9SF2-201ENST00000376387 HK3P52790 923 aa11.31□□□□□ -0.6
TM9SF2-201ENST00000376387 PAN2Q504Q3 1202 aaKnown RBP11.31□□□□□ -0.6
TM9SF2-201ENST00000376387 NECAB2Q7Z6G3 386 aa11.31□□□□□ -0.6
TM9SF2-201ENST00000376387 B3GNT8Q7Z7M8 397 aa11.31□□□□□ -0.6
TM9SF2-201ENST00000376387 APOBEC3FQ8IUX4 373 aaKnown RBP11.31□□□□□ -0.6
TM9SF2-201ENST00000376387 FAM83FQ8NEG4 500 aaPredicted RBP11.31□□□□□ -0.6
TM9SF2-201ENST00000376387 DNAJB3Q8WWF6 145 aa11.31□□□□□ -0.6
TM9SF2-201ENST00000376387 MYLPFQ96A32 169 aa11.31□□□□□ -0.6
TM9SF2-201ENST00000376387 FUBP1Q96AE4 644 aaKnown RBP11.31□□□□□ -0.6
TM9SF2-201ENST00000376387 RHBDF1Q96CC6 855 aa11.31□□□□□ -0.6
TM9SF2-201ENST00000376387 SMIM14Q96QK8 99 aa11.31□□□□□ -0.6
TM9SF2-201ENST00000376387 SLIRPQ9GZT3 109 aaKnown RBP11.31□□□□□ -0.6
TM9SF2-201ENST00000376387 TFB2MQ9H5Q4 396 aaKnown RBP11.31□□□□□ -0.6
TM9SF2-201ENST00000376387 RMND5AQ9H871 391 aa11.31□□□□□ -0.6
TM9SF2-201ENST00000376387 ACTR8Q9H981 624 aa11.31□□□□□ -0.6
TM9SF2-201ENST00000376387 AGO3Q9H9G7 860 aaKnown RBP11.31□□□□□ -0.6
TM9SF2-201ENST00000376387 SP110Q9HB58 689 aa11.31□□□□□ -0.6
TM9SF2-201ENST00000376387 VTA1Q9NP79 307 aa11.31□□□□□ -0.6
TM9SF2-201ENST00000376387 PCTPQ9UKL6 214 aa11.31□□□□□ -0.6
TM9SF2-201ENST00000376387 HS3ST4Q9Y661 456 aa11.31□□□□□ -0.6
TM9SF2-201ENST00000376387 SYCE1LA8MT33 242 aa11.31□□□□□ -0.6
TM9SF2-201ENST00000376387 FAM47E-STBD1D6RA91 191 aa11.31□□□□□ -0.6
TM9SF2-201ENST00000376387 E9PAM4 449 aa11.31□□□□□ -0.6
TM9SF2-201ENST00000376387 KERAO60938 352 aa11.31□□□□□ -0.6
TM9SF2-201ENST00000376387 SLC25A27O95847 323 aa11.31□□□□□ -0.6
TM9SF2-201ENST00000376387 FADS2O95864 444 aaKnown RBP11.31□□□□□ -0.6
TM9SF2-201ENST00000376387 IGLV3-25P01717 112 aa11.31□□□□□ -0.6
TM9SF2-201ENST00000376387 DCTP40126 519 aa11.31□□□□□ -0.6
TM9SF2-201ENST00000376387 CDKN1CP49918 316 aaPredicted RBP11.31□□□□□ -0.6
TM9SF2-201ENST00000376387 CLCNKBP51801 687 aa11.31□□□□□ -0.6
TM9SF2-201ENST00000376387 IL1RL1Q01638 556 aa11.31□□□□□ -0.6
TM9SF2-201ENST00000376387 EIF4EBP2Q13542 120 aaPredicted RBP11.31□□□□□ -0.6
TM9SF2-201ENST00000376387 NPTX1Q15818 432 aa11.31□□□□□ -0.6
TM9SF2-201ENST00000376387 DGUOKQ16854 277 aa11.31□□□□□ -0.6
TM9SF2-201ENST00000376387 LRIT3Q3SXY7 679 aa11.31□□□□□ -0.6
TM9SF2-201ENST00000376387 AFMIDQ63HM1 303 aa11.31□□□□□ -0.6
TM9SF2-201ENST00000376387 FAM126BQ8IXS8 530 aa11.31□□□□□ -0.6
TM9SF2-201ENST00000376387 PHACTR4Q8IZ21 702 aa11.31□□□□□ -0.6
TM9SF2-201ENST00000376387 RHEBL1Q8TAI7 183 aa11.31□□□□□ -0.6
TM9SF2-201ENST00000376387 RORBQ92753 470 aa11.31□□□□□ -0.6
TM9SF2-201ENST00000376387 UBE2FQ969M7 185 aa11.31□□□□□ -0.6
TM9SF2-201ENST00000376387 HOXD1Q9GZZ0 328 aa11.31□□□□□ -0.6
TM9SF2-201ENST00000376387 TRIP12Q14669 1992 aaPredicted RBP11.3□□□□□ -0.6
TM9SF2-201ENST00000376387 TYW5A2RUC4 315 aaKnown RBP11.3□□□□□ -0.6
TM9SF2-201ENST00000376387 IRAK2O43187 625 aa11.3□□□□□ -0.6
TM9SF2-201ENST00000376387 VPS4BO75351 444 aa11.3□□□□□ -0.6
TM9SF2-201ENST00000376387 SEC24AO95486 1093 aa11.3□□□□□ -0.6
TM9SF2-201ENST00000376387 ARL1P40616 181 aaPredicted RBP11.3□□□□□ -0.6
TM9SF2-201ENST00000376387 HAAOP46952 286 aa11.3□□□□□ -0.6
TM9SF2-201ENST00000376387 ALDH7A1P49419 539 aaKnown RBP11.3□□□□□ -0.6
TM9SF2-201ENST00000376387 ERVPABLB-1P60509 514 aa11.3□□□□□ -0.6
TM9SF2-201ENST00000376387 PRKG2Q13237 762 aa11.3□□□□□ -0.6
TM9SF2-201ENST00000376387 TRIP4Q15650 581 aaPredicted RBP11.3□□□□□ -0.6
TM9SF2-201ENST00000376387 GTDC1Q4AE62 458 aa11.3□□□□□ -0.6
TM9SF2-201ENST00000376387 DCP2Q8IU60 420 aaKnown RBP11.3□□□□□ -0.6
TM9SF2-201ENST00000376387 ARMC8Q8IUR7 673 aa11.3□□□□□ -0.6
TM9SF2-201ENST00000376387 TRIB2Q92519 343 aa11.3□□□□□ -0.6
TM9SF2-201ENST00000376387 PSMG2Q969U7 264 aa11.3□□□□□ -0.6
TM9SF2-201ENST00000376387 KIAA1191Q96A73 305 aa11.3□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms