RNA–Protein interactions for RNA: ENST00000375340.10

SMC1A-202, Transcript of structural maintenance of chromosomes 1A, humanhuman

TSL 1 (best) BASIC

Gene SMC1A, Length 9,930 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC1A-202ENST00000375340 OPN1SWP03999 348 aa6.43□□□□□ -1.38
SMC1A-202ENST00000375340 CD1DP15813 335 aa6.43□□□□□ -1.38
SMC1A-202ENST00000375340 KIR3DL1P43629 444 aa6.43□□□□□ -1.38
SMC1A-202ENST00000375340 RPS24P62847 133 aaKnown RBP6.43□□□□□ -1.38
SMC1A-202ENST00000375340 CYP2A13Q16696 494 aa6.43□□□□□ -1.38
SMC1A-202ENST00000375340 ANXA8L1Q5VT79 327 aa6.43□□□□□ -1.38
SMC1A-202ENST00000375340 FBXL22Q6P050 247 aa6.43□□□□□ -1.38
SMC1A-202ENST00000375340 FAM180AQ6UWF9 173 aa6.43□□□□□ -1.38
SMC1A-202ENST00000375340 UGT2A3Q6UWM9 527 aa6.43□□□□□ -1.38
SMC1A-202ENST00000375340 GPR65Q8IYL9 337 aa6.43□□□□□ -1.38
SMC1A-202ENST00000375340 PGBD3Q8N328 593 aa6.43□□□□□ -1.38
SMC1A-202ENST00000375340 NPY6RQ99463 290 aa6.43□□□□□ -1.38
SMC1A-202ENST00000375340 MCMBPQ9BTE3 642 aa6.43□□□□□ -1.38
SMC1A-202ENST00000375340 NMUR1Q9HB89 426 aa6.43□□□□□ -1.38
SMC1A-202ENST00000375340 PRKAB1Q9Y478 270 aa6.43□□□□□ -1.38
SMC1A-202ENST00000375340 SESN1Q9Y6P5 492 aa6.43□□□□□ -1.38
SMC1A-202ENST00000375340 A0A0U1RQS6 177 aa6.43□□□□□ -1.38
SMC1A-202ENST00000375340 MAGEB17A8MXT2 336 aa6.43□□□□□ -1.38
SMC1A-202ENST00000375340 NFKBIEO00221 500 aa6.43□□□□□ -1.38
SMC1A-202ENST00000375340 SCAMP1O15126 338 aa6.43□□□□□ -1.38
SMC1A-202ENST00000375340 ACSL4O60488 711 aa6.43□□□□□ -1.38
SMC1A-202ENST00000375340 ZNF12P17014 697 aa6.43□□□□□ -1.38
SMC1A-202ENST00000375340 DNAJB13P59910 316 aa6.43□□□□□ -1.38
SMC1A-202ENST00000375340 C1QTNF8P60827 252 aa6.43□□□□□ -1.38
SMC1A-202ENST00000375340 KANK2Q63ZY3 851 aa6.43□□□□□ -1.38
SMC1A-202ENST00000375340 MAVSQ7Z434 540 aa6.43□□□□□ -1.38
SMC1A-202ENST00000375340 SYVN1Q86TM6 617 aa6.43□□□□□ -1.38
SMC1A-202ENST00000375340 HID1Q8IV36 788 aa6.43□□□□□ -1.38
SMC1A-202ENST00000375340 NPLOC4Q8TAT6 608 aa6.43□□□□□ -1.38
SMC1A-202ENST00000375340 TTPALQ9BTX7 342 aa6.43□□□□□ -1.38
SMC1A-202ENST00000375340 AMBNQ9NP70 447 aa6.43□□□□□ -1.38
SMC1A-202ENST00000375340 SMOXQ9NWM0 555 aa6.43□□□□□ -1.38
SMC1A-202ENST00000375340 MYO18AQ92614 2054 aaKnown RBP6.43□□□□□ -1.38
SMC1A-202ENST00000375340 PALM2-AKAP2B1ALY0 433 aaPredicted RBP6.43□□□□□ -1.38
SMC1A-202ENST00000375340 UGT2B17O75795 530 aa6.43□□□□□ -1.38
SMC1A-202ENST00000375340 PRKD3O94806 890 aa6.43□□□□□ -1.38
SMC1A-202ENST00000375340 UGT2B4P06133 528 aa6.43□□□□□ -1.38
SMC1A-202ENST00000375340 NR2F1P10589 423 aa6.43□□□□□ -1.38
SMC1A-202ENST00000375340 ITGA2P17301 1181 aa6.43□□□□□ -1.38
SMC1A-202ENST00000375340 RPIAP49247 311 aa6.43□□□□□ -1.38
SMC1A-202ENST00000375340 GATMP50440 423 aa6.43□□□□□ -1.38
SMC1A-202ENST00000375340 MYBPC1Q00872 1141 aa6.43□□□□□ -1.38
SMC1A-202ENST00000375340 ELAVL2Q12926 359 aaKnown RBP6.43□□□□□ -1.38
SMC1A-202ENST00000375340 HSPB3Q12988 150 aa6.43□□□□□ -1.38
SMC1A-202ENST00000375340 BTG3Q14201 252 aaPredicted RBP6.43□□□□□ -1.38
SMC1A-202ENST00000375340 KIAA0408Q6ZU52 694 aa6.43□□□□□ -1.38
SMC1A-202ENST00000375340 CDH24Q86UP0 819 aa6.43□□□□□ -1.38
SMC1A-202ENST00000375340 OR4F6Q8NGB9 312 aa6.43□□□□□ -1.38
SMC1A-202ENST00000375340 TEX47Q8TBZ9 253 aa6.43□□□□□ -1.38
SMC1A-202ENST00000375340 PYCR2Q96C36 320 aa6.43□□□□□ -1.38
SMC1A-202ENST00000375340 RMI1Q9H9A7 625 aa6.43□□□□□ -1.38
SMC1A-202ENST00000375340 CCNB1IP1Q9NPC3 277 aa6.43□□□□□ -1.38
SMC1A-202ENST00000375340 MARCH4Q9P2E8 410 aaPredicted RBP6.43□□□□□ -1.38
SMC1A-202ENST00000375340 RAPGEFL1Q9UHV5 662 aa6.43□□□□□ -1.38
SMC1A-202ENST00000375340 TRIM17Q9Y577 477 aa6.43□□□□□ -1.38
SMC1A-202ENST00000375340 ACTL7AQ9Y615 435 aa6.43□□□□□ -1.38
SMC1A-202ENST00000375340 TRIP11Q15643 1979 aa6.43□□□□□ -1.38
SMC1A-202ENST00000375340 STK16O75716 305 aa6.43□□□□□ -1.38
SMC1A-202ENST00000375340 PDE9AO76083 593 aa6.43□□□□□ -1.38
SMC1A-202ENST00000375340 CYP11A1P05108 521 aa6.43□□□□□ -1.38
SMC1A-202ENST00000375340 OGNP20774 298 aaKnown RBP6.43□□□□□ -1.38
SMC1A-202ENST00000375340 GPR1P46091 355 aa6.43□□□□□ -1.38
SMC1A-202ENST00000375340 USP43Q70EL4 1123 aa6.43□□□□□ -1.38
SMC1A-202ENST00000375340 ACVR1CQ8NER5 493 aa6.43□□□□□ -1.38
SMC1A-202ENST00000375340 NUSAP1Q9BXS6 441 aaKnown RBP6.43□□□□□ -1.38
SMC1A-202ENST00000375340 SACM1LQ9NTJ5 587 aa6.43□□□□□ -1.38
SMC1A-202ENST00000375340 UPK3BL1B0FP48 263 aa6.43□□□□□ -1.38
SMC1A-202ENST00000375340 UPK3BL2E5RIL1 263 aa6.43□□□□□ -1.38
SMC1A-202ENST00000375340 SSNA1O43805 119 aa6.43□□□□□ -1.38
SMC1A-202ENST00000375340 ALDH1A2O94788 518 aa6.43□□□□□ -1.38
SMC1A-202ENST00000375340 PCCBP05166 539 aa6.43□□□□□ -1.38
SMC1A-202ENST00000375340 CD36P16671 472 aa6.43□□□□□ -1.38
SMC1A-202ENST00000375340 ZNF182P17025 639 aaPredicted RBP6.43□□□□□ -1.38
SMC1A-202ENST00000375340 GKP32189 559 aa6.43□□□□□ -1.38
SMC1A-202ENST00000375340 BDKRB1P46663 353 aa6.43□□□□□ -1.38
SMC1A-202ENST00000375340 ANXA11P50995 505 aaKnown RBP6.43□□□□□ -1.38
SMC1A-202ENST00000375340 KCNQ1P51787 676 aa6.43□□□□□ -1.38
SMC1A-202ENST00000375340 USP41Q3LFD5 358 aa6.43□□□□□ -1.38
SMC1A-202ENST00000375340 CCDC149Q6ZUS6 474 aa6.43□□□□□ -1.38
SMC1A-202ENST00000375340 KBTBD7Q8WVZ9 684 aa6.43□□□□□ -1.38
SMC1A-202ENST00000375340 PAAF1Q9BRP4 392 aa6.43□□□□□ -1.38
SMC1A-202ENST00000375340 CXCL16Q9H2A7 254 aa6.43□□□□□ -1.38
SMC1A-202ENST00000375340 MKS1Q9NXB0 559 aa6.43□□□□□ -1.38
SMC1A-202ENST00000375340 GALPQ9UBC7 116 aa6.43□□□□□ -1.38
SMC1A-202ENST00000375340 ENOPH1Q9UHY7 261 aa6.43□□□□□ -1.38
SMC1A-202ENST00000375340 SSR3Q9UNL2 185 aa6.43□□□□□ -1.38
SMC1A-202ENST00000375340 SMIM30A4D0T7 59 aa6.43□□□□□ -1.38
SMC1A-202ENST00000375340 KPNA5O15131 536 aa6.43□□□□□ -1.38
SMC1A-202ENST00000375340 MTX2O75431 263 aa6.43□□□□□ -1.38
SMC1A-202ENST00000375340 ENGP17813 658 aa6.43□□□□□ -1.38
SMC1A-202ENST00000375340 HCAR3P49019 387 aa6.43□□□□□ -1.38
SMC1A-202ENST00000375340 TECRLQ5HYJ1 363 aa6.43□□□□□ -1.38
SMC1A-202ENST00000375340 TRNP1Q6NT89 227 aa6.43□□□□□ -1.38
SMC1A-202ENST00000375340 PRR23BQ6ZRT6 265 aa6.43□□□□□ -1.38
SMC1A-202ENST00000375340 RNF44Q7L0R7 432 aa6.43□□□□□ -1.38
SMC1A-202ENST00000375340 LYSMD3Q7Z3D4 306 aa6.43□□□□□ -1.38
SMC1A-202ENST00000375340 FAM129CQ86XR2 697 aa6.43□□□□□ -1.38
SMC1A-202ENST00000375340 CRYBG2Q8N1P7 616 aa6.43□□□□□ -1.38
SMC1A-202ENST00000375340 SMG8Q8ND04 991 aaKnown RBP6.43□□□□□ -1.38
SMC1A-202ENST00000375340 CITED4Q96RK1 184 aa6.43□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms