RNA–Protein interactions for RNA: ENST00000375224.1

UBR4-202, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 2 BASIC

Gene UBR4, Length 3,475 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-202ENST00000375224 SDR39U1Q9NRG7 319 aaPredicted RBP8.07□□□□□ -1.12
UBR4-202ENST00000375224 RAD18Q9NS91 495 aa8.07□□□□□ -1.12
UBR4-202ENST00000375224 KCTD5Q9NXV2 234 aa8.07□□□□□ -1.12
UBR4-202ENST00000375224 IQCF5A8MTL0 148 aa8.07□□□□□ -1.12
UBR4-202ENST00000375224 WASH3PC4AMC7 463 aa8.07□□□□□ -1.12
UBR4-202ENST00000375224 NEDD8-MDP1E9PL57 170 aa8.07□□□□□ -1.12
UBR4-202ENST00000375224 ZNF197O14709 1029 aa8.07□□□□□ -1.12
UBR4-202ENST00000375224 FFAR2O15552 330 aa8.07□□□□□ -1.12
UBR4-202ENST00000375224 SEC24DO94855 1032 aaPredicted RBP8.07□□□□□ -1.12
UBR4-202ENST00000375224 TRIM16O95361 564 aa8.07□□□□□ -1.12
UBR4-202ENST00000375224 OTCP00480 354 aa8.07□□□□□ -1.12
UBR4-202ENST00000375224 PRR35P0CG20 571 aa8.07□□□□□ -1.12
UBR4-202ENST00000375224 CD1EP15812 388 aa8.07□□□□□ -1.12
UBR4-202ENST00000375224 GKP32189 559 aa8.07□□□□□ -1.12
UBR4-202ENST00000375224 AGTR2P50052 363 aa8.07□□□□□ -1.12
UBR4-202ENST00000375224 ERFP50548 548 aa8.07□□□□□ -1.12
UBR4-202ENST00000375224 FOXM1Q08050 763 aa8.07□□□□□ -1.12
UBR4-202ENST00000375224 TEAD2Q15562 447 aa8.07□□□□□ -1.12
UBR4-202ENST00000375224 CDKL4Q5MAI5 379 aa8.07□□□□□ -1.12
UBR4-202ENST00000375224 SULT1C3Q6IMI6 304 aa8.07□□□□□ -1.12
UBR4-202ENST00000375224 PAOXQ6QHF9 649 aa8.07□□□□□ -1.12
UBR4-202ENST00000375224 TMEM25Q86YD3 366 aa8.07□□□□□ -1.12
UBR4-202ENST00000375224 PQLC1Q8N2U9 271 aa8.07□□□□□ -1.12
UBR4-202ENST00000375224 GDPD5Q8WTR4 605 aa8.07□□□□□ -1.12
UBR4-202ENST00000375224 ATP6V1E2Q96A05 226 aa8.07□□□□□ -1.12
UBR4-202ENST00000375224 LRGUKQ96M69 825 aa8.07□□□□□ -1.12
UBR4-202ENST00000375224 PHF12Q96QT6 1004 aa8.07□□□□□ -1.12
UBR4-202ENST00000375224 TUBB1Q9H4B7 451 aa8.07□□□□□ -1.12
UBR4-202ENST00000375224 ZDHHC6Q9H6R6 413 aa8.07□□□□□ -1.12
UBR4-202ENST00000375224 RDH14Q9HBH5 336 aa8.07□□□□□ -1.12
UBR4-202ENST00000375224 ZDHHC7Q9NXF8 308 aa8.07□□□□□ -1.12
UBR4-202ENST00000375224 PKD2L2Q9NZM6 624 aa8.07□□□□□ -1.12
UBR4-202ENST00000375224 EIF2B4Q9UI10 523 aaKnown RBP8.07□□□□□ -1.12
UBR4-202ENST00000375224 RHOP08100 348 aa8.06□□□□□ -1.12
UBR4-202ENST00000375224 OR56A5P0C7T3 313 aa8.06□□□□□ -1.12
UBR4-202ENST00000375224 ZNF30P17039 623 aa8.06□□□□□ -1.12
UBR4-202ENST00000375224 VCLP18206 1134 aa8.06□□□□□ -1.12
UBR4-202ENST00000375224 CCR2P41597 374 aa8.06□□□□□ -1.12
UBR4-202ENST00000375224 CTSOP43234 321 aaPredicted RBP8.06□□□□□ -1.12
UBR4-202ENST00000375224 PIK3CGP48736 1102 aa8.06□□□□□ -1.12
UBR4-202ENST00000375224 STK19P49842 368 aaPredicted RBP8.06□□□□□ -1.12
UBR4-202ENST00000375224 ERVK-8P63133 956 aa8.06□□□□□ -1.12
UBR4-202ENST00000375224 XKR7Q5GH72 579 aa8.06□□□□□ -1.12
UBR4-202ENST00000375224 RARS2Q5T160 578 aaKnown RBP8.06□□□□□ -1.12
UBR4-202ENST00000375224 GPRC6AQ5T6X5 926 aa8.06□□□□□ -1.12
UBR4-202ENST00000375224 BRAT1Q6PJG6 821 aa8.06□□□□□ -1.12
UBR4-202ENST00000375224 SBSNQ6UWP8 590 aa8.06□□□□□ -1.12
UBR4-202ENST00000375224 RFPL4BQ6ZWI9 263 aa8.06□□□□□ -1.12
UBR4-202ENST00000375224 BHLHE22Q8NFJ8 381 aaPredicted RBP8.06□□□□□ -1.12
UBR4-202ENST00000375224 POF1BQ8WVV4 589 aa8.06□□□□□ -1.12
UBR4-202ENST00000375224 PBXIP1Q96AQ6 731 aa8.06□□□□□ -1.12
UBR4-202ENST00000375224 EME1Q96AY2 570 aa8.06□□□□□ -1.12
UBR4-202ENST00000375224 EFHD2Q96C19 240 aaPredicted RBP8.06□□□□□ -1.12
UBR4-202ENST00000375224 CCDC138Q96M89 665 aa8.06□□□□□ -1.12
UBR4-202ENST00000375224 KCNA7Q96RP8 456 aa8.06□□□□□ -1.12
UBR4-202ENST00000375224 COPS8Q99627 209 aa8.06□□□□□ -1.12
UBR4-202ENST00000375224 SMG9Q9H0W8 520 aaKnown RBP8.06□□□□□ -1.12
UBR4-202ENST00000375224 FBRSL1Q9HCM7 1045 aaKnown RBP8.06□□□□□ -1.12
UBR4-202ENST00000375224 HCFC1R1Q9NWW0 138 aa8.06□□□□□ -1.12
UBR4-202ENST00000375224 BTRCQ9Y297 605 aa8.06□□□□□ -1.12
UBR4-202ENST00000375224 ANGPTL3Q9Y5C1 460 aa8.06□□□□□ -1.12
UBR4-202ENST00000375224 A0A0U1RQS6 177 aa8.06□□□□□ -1.12
UBR4-202ENST00000375224 NPIPB15A6NHN6 443 aaPredicted RBP8.06□□□□□ -1.12
UBR4-202ENST00000375224 TLL1O43897 1013 aa8.06□□□□□ -1.12
UBR4-202ENST00000375224 UGT1A6P19224 532 aa8.06□□□□□ -1.12
UBR4-202ENST00000375224 MSH3P20585 1137 aa8.06□□□□□ -1.12
UBR4-202ENST00000375224 UGT1A1P22309 533 aa8.06□□□□□ -1.12
UBR4-202ENST00000375224 UGT1A4P22310 534 aa8.06□□□□□ -1.12
UBR4-202ENST00000375224 TCEA1P23193 301 aaKnown RBP8.06□□□□□ -1.12
UBR4-202ENST00000375224 UGT1A3P35503 534 aa8.06□□□□□ -1.12
UBR4-202ENST00000375224 UGT1A5P35504 534 aa8.06□□□□□ -1.12
UBR4-202ENST00000375224 DPP6P42658 865 aa8.06□□□□□ -1.12
UBR4-202ENST00000375224 EMP3P54852 163 aa8.06□□□□□ -1.12
UBR4-202ENST00000375224 KCNK10P57789 538 aa8.06□□□□□ -1.12
UBR4-202ENST00000375224 GTF2H2Q13888 395 aa8.06□□□□□ -1.12
UBR4-202ENST00000375224 ARHGEF7Q14155 803 aa8.06□□□□□ -1.12
UBR4-202ENST00000375224 GRB7Q14451 532 aa8.06□□□□□ -1.12
UBR4-202ENST00000375224 TRIP10Q15642 601 aa8.06□□□□□ -1.12
UBR4-202ENST00000375224 LRRC66Q68CR7 880 aa8.06□□□□□ -1.12
UBR4-202ENST00000375224 GTF2H2CQ6P1K8 395 aa8.06□□□□□ -1.12
UBR4-202ENST00000375224 GDPD4Q6W3E5 623 aa8.06□□□□□ -1.12
UBR4-202ENST00000375224 FUNDC1Q8IVP5 155 aa8.06□□□□□ -1.12
UBR4-202ENST00000375224 AHI1Q8N157 1196 aa8.06□□□□□ -1.12
UBR4-202ENST00000375224 KIAA1958Q8N8K9 716 aa8.06□□□□□ -1.12
UBR4-202ENST00000375224 GALNT6Q8NCL4 622 aa8.06□□□□□ -1.12
UBR4-202ENST00000375224 C17orf80Q9BSJ5 609 aa8.06□□□□□ -1.12
UBR4-202ENST00000375224 ZIM2Q9NZV7 527 aa8.06□□□□□ -1.12
UBR4-202ENST00000375224 MARK1Q9P0L2 795 aa8.06□□□□□ -1.12
UBR4-202ENST00000375224 TMEM181Q9P2C4 612 aa8.06□□□□□ -1.12
UBR4-202ENST00000375224 PTBP2Q9UKA9 531 aaKnown RBP8.06□□□□□ -1.12
UBR4-202ENST00000375224 DMTF1Q9Y222 760 aa8.06□□□□□ -1.12
UBR4-202ENST00000375224 CCL26Q9Y258 94 aa8.06□□□□□ -1.12
UBR4-202ENST00000375224 ZSCAN5BA6NJL1 495 aa8.06□□□□□ -1.12
UBR4-202ENST00000375224 SNTNA6NMZ2 147 aa8.06□□□□□ -1.12
UBR4-202ENST00000375224 HIDE1A8MVS5 230 aa8.06□□□□□ -1.12
UBR4-202ENST00000375224 E7ENX8 843 aa8.06□□□□□ -1.12
UBR4-202ENST00000375224 H3BNX3 289 aa8.06□□□□□ -1.12
UBR4-202ENST00000375224 NR5A2O00482 541 aa8.06□□□□□ -1.12
UBR4-202ENST00000375224 ACOT8O14734 319 aa8.06□□□□□ -1.12
UBR4-202ENST00000375224 KPNA5O15131 536 aa8.06□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms