RNA–Protein interactions for RNA: ENST00000374198.4

PRPF4-201, Transcript of pre-mRNA processing factor 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PRPF4, Length 2,787 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF4-201ENST00000374198 TIGARQ9NQ88 270 aa12.71□□□□□ -0.38
PRPF4-201ENST00000374198 RNF186Q9NXI6 227 aa12.71□□□□□ -0.38
PRPF4-201ENST00000374198 CDKN2AIPQ9NXV6 580 aaPredicted RBP12.71□□□□□ -0.38
PRPF4-201ENST00000374198 BTRCQ9Y297 605 aa12.71□□□□□ -0.38
PRPF4-201ENST00000374198 M0R082 166 aa12.7□□□□□ -0.38
PRPF4-201ENST00000374198 TFECO14948 347 aaPredicted RBP12.7□□□□□ -0.38
PRPF4-201ENST00000374198 SLC22A3O75751 556 aa12.7□□□□□ -0.38
PRPF4-201ENST00000374198 CYBBP04839 570 aa12.7□□□□□ -0.38
PRPF4-201ENST00000374198 NFICP08651 508 aa12.7□□□□□ -0.38
PRPF4-201ENST00000374198 PFKLP17858 780 aa12.7□□□□□ -0.38
PRPF4-201ENST00000374198 GJA5P36382 358 aa12.7□□□□□ -0.38
PRPF4-201ENST00000374198 POLR2JP52435 117 aaKnown RBP12.7□□□□□ -0.38
PRPF4-201ENST00000374198 SOWAHAQ2M3V2 549 aa12.7□□□□□ -0.38
PRPF4-201ENST00000374198 PCID2Q5JVF3 399 aa12.7□□□□□ -0.38
PRPF4-201ENST00000374198 PRSS36Q5K4E3 855 aa12.7□□□□□ -0.38
PRPF4-201ENST00000374198 PPP1R26Q5T8A7 1209 aaPredicted RBP12.7□□□□□ -0.38
PRPF4-201ENST00000374198 KIAA0319Q5VV43 1072 aa12.7□□□□□ -0.38
PRPF4-201ENST00000374198 NAPEPLDQ6IQ20 393 aa12.7□□□□□ -0.38
PRPF4-201ENST00000374198 CAPN13Q6MZZ7 669 aaPredicted RBP12.7□□□□□ -0.38
PRPF4-201ENST00000374198 ESRP1Q6NXG1 681 aaKnown RBP12.7□□□□□ -0.38
PRPF4-201ENST00000374198 SPATA19Q7Z5L4 167 aa12.7□□□□□ -0.38
PRPF4-201ENST00000374198 GALNT5Q7Z7M9 940 aa12.7□□□□□ -0.38
PRPF4-201ENST00000374198 GALNT7Q86SF2 657 aa12.7□□□□□ -0.38
PRPF4-201ENST00000374198 VSIG10LQ86VR7 867 aa12.7□□□□□ -0.38
PRPF4-201ENST00000374198 SLC2A14Q8TDB8 520 aa12.7□□□□□ -0.38
PRPF4-201ENST00000374198 SLC35F5Q8WV83 523 aa12.7□□□□□ -0.38
PRPF4-201ENST00000374198 KCNA7Q96RP8 456 aa12.7□□□□□ -0.38
PRPF4-201ENST00000374198 ACOX2Q99424 681 aa12.7□□□□□ -0.38
PRPF4-201ENST00000374198 NT5C1AQ9BXI3 368 aa12.7□□□□□ -0.38
PRPF4-201ENST00000374198 ACAD9Q9H845 621 aa12.7□□□□□ -0.38
PRPF4-201ENST00000374198 ZNF112Q9UJU3 913 aa12.7□□□□□ -0.38
PRPF4-201ENST00000374198 TMPRSS11EQ9UL52 423 aa12.7□□□□□ -0.38
PRPF4-201ENST00000374198 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP12.7□□□□□ -0.38
PRPF4-201ENST00000374198 IPPQ9Y573 584 aa12.7□□□□□ -0.38
PRPF4-201ENST00000374198 A0A087WZ62 844 aa12.7□□□□□ -0.38
PRPF4-201ENST00000374198 INO80B-WBP1J3KQ70 363 aa12.7□□□□□ -0.38
PRPF4-201ENST00000374198 CYP2A6P11509 494 aaPredicted RBP12.7□□□□□ -0.38
PRPF4-201ENST00000374198 PIK3CBP42338 1070 aa12.7□□□□□ -0.38
PRPF4-201ENST00000374198 EFNA5P52803 228 aa12.7□□□□□ -0.38
PRPF4-201ENST00000374198 MTPNP58546 118 aa12.7□□□□□ -0.38
PRPF4-201ENST00000374198 SIGLEC11Q96RL6 698 aa12.7□□□□□ -0.38
PRPF4-201ENST00000374198 SLC30A2Q9BRI3 323 aa12.7□□□□□ -0.38
PRPF4-201ENST00000374198 ALG9Q9H6U8 611 aa12.7□□□□□ -0.38
PRPF4-201ENST00000374198 GORASP2Q9H8Y8 452 aa12.7□□□□□ -0.38
PRPF4-201ENST00000374198 TMPRSS4Q9NRS4 437 aa12.7□□□□□ -0.38
PRPF4-201ENST00000374198 AIG1Q9NVV5 245 aa12.7□□□□□ -0.38
PRPF4-201ENST00000374198 EIF3KQ9UBQ5 218 aaKnown RBP12.7□□□□□ -0.38
PRPF4-201ENST00000374198 LIMD1Q9UGP4 676 aa12.7□□□□□ -0.38
PRPF4-201ENST00000374198 VPS4BO75351 444 aa12.69□□□□□ -0.38
PRPF4-201ENST00000374198 EPN2O95208 641 aa12.69□□□□□ -0.38
PRPF4-201ENST00000374198 RPLP0P05388 317 aaKnown RBP12.69□□□□□ -0.38
PRPF4-201ENST00000374198 SUPT20HL2P0C7V6 817 aa12.69□□□□□ -0.38
PRPF4-201ENST00000374198 CXCL8P10145 99 aa12.69□□□□□ -0.38
PRPF4-201ENST00000374198 DNAJB2P25686 324 aa12.69□□□□□ -0.38
PRPF4-201ENST00000374198 MRPL19P49406 292 aaKnown RBP12.69□□□□□ -0.38
PRPF4-201ENST00000374198 SNX16P57768 344 aa12.69□□□□□ -0.38
PRPF4-201ENST00000374198 KEAP1Q14145 624 aa12.69□□□□□ -0.38
PRPF4-201ENST00000374198 IRF3Q14653 427 aa12.69□□□□□ -0.38
PRPF4-201ENST00000374198 PIK3R6Q5UE93 754 aa12.69□□□□□ -0.38
PRPF4-201ENST00000374198 AHSA2Q719I0 299 aa12.69□□□□□ -0.38
PRPF4-201ENST00000374198 AADATQ8N5Z0 425 aa12.69□□□□□ -0.38
PRPF4-201ENST00000374198 ANKRD49Q8WVL7 239 aa12.69□□□□□ -0.38
PRPF4-201ENST00000374198 IPCEF1Q8WWN9 437 aaPredicted RBP12.69□□□□□ -0.38
PRPF4-201ENST00000374198 FCGR1BQ92637 280 aa12.69□□□□□ -0.38
PRPF4-201ENST00000374198 SH3KBP1Q96B97 665 aa12.69□□□□□ -0.38
PRPF4-201ENST00000374198 TMEM80Q96HE8 168 aa12.69□□□□□ -0.38
PRPF4-201ENST00000374198 PPM1MQ96MI6 270 aa12.69□□□□□ -0.38
PRPF4-201ENST00000374198 TRNT1Q96Q11 434 aaKnown RBP12.69□□□□□ -0.38
PRPF4-201ENST00000374198 RIBC2Q9H4K1 309 aa12.69□□□□□ -0.38
PRPF4-201ENST00000374198 RNF167Q9H6Y7 350 aa12.69□□□□□ -0.38
PRPF4-201ENST00000374198 GLTPQ9NZD2 209 aa12.69□□□□□ -0.38
PRPF4-201ENST00000374198 KLHL20Q9Y2M5 609 aa12.69□□□□□ -0.38
PRPF4-201ENST00000374198 PKP3Q9Y446 797 aa12.69□□□□□ -0.38
PRPF4-201ENST00000374198 LOC100506127A0A0U1RQW1 187 aa12.69□□□□□ -0.38
PRPF4-201ENST00000374198 PDGFAP04085 211 aa12.69□□□□□ -0.38
PRPF4-201ENST00000374198 CYP4B1P13584 511 aa12.69□□□□□ -0.38
PRPF4-201ENST00000374198 EFNA1P20827 205 aaPredicted RBP12.69□□□□□ -0.38
PRPF4-201ENST00000374198 IGFBP5P24593 272 aa12.69□□□□□ -0.38
PRPF4-201ENST00000374198 GRK5P34947 590 aa12.69□□□□□ -0.38
PRPF4-201ENST00000374198 CA5AP35218 305 aa12.69□□□□□ -0.38
PRPF4-201ENST00000374198 MLLT3P42568 568 aaPredicted RBP12.69□□□□□ -0.38
PRPF4-201ENST00000374198 TM4SF4P48230 202 aa12.69□□□□□ -0.38
PRPF4-201ENST00000374198 SCNN1GP51170 649 aa12.69□□□□□ -0.38
PRPF4-201ENST00000374198 MAPK12P53778 367 aa12.69□□□□□ -0.38
PRPF4-201ENST00000374198 TNK1Q13470 666 aa12.69□□□□□ -0.38
PRPF4-201ENST00000374198 XKRXQ6PP77 449 aa12.69□□□□□ -0.38
PRPF4-201ENST00000374198 CREB3L2Q70SY1 520 aa12.69□□□□□ -0.38
PRPF4-201ENST00000374198 HIPK1Q86Z02 1210 aa12.69□□□□□ -0.38
PRPF4-201ENST00000374198 TCTE3Q8IZS6 198 aa12.69□□□□□ -0.38
PRPF4-201ENST00000374198 METTL2AQ96IZ6 378 aaKnown RBP12.69□□□□□ -0.38
PRPF4-201ENST00000374198 CEP19Q96LK0 163 aa12.69□□□□□ -0.38
PRPF4-201ENST00000374198 Q96MT0 163 aa12.69□□□□□ -0.38
PRPF4-201ENST00000374198 PRRG3Q9BZD7 231 aa12.69□□□□□ -0.38
PRPF4-201ENST00000374198 MMP28Q9H239 520 aa12.69□□□□□ -0.38
PRPF4-201ENST00000374198 KCNN2Q9H2S1 579 aa12.69□□□□□ -0.38
PRPF4-201ENST00000374198 UCKL1Q9NWZ5 548 aa12.69□□□□□ -0.38
PRPF4-201ENST00000374198 B3GNT2Q9NY97 397 aa12.69□□□□□ -0.38
PRPF4-201ENST00000374198 ZMAT5Q9UDW3 170 aaKnown RBP12.69□□□□□ -0.38
PRPF4-201ENST00000374198 TRHDEQ9UKU6 1024 aa12.69□□□□□ -0.38
PRPF4-201ENST00000374198 U3KQV3 271 aa12.69□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms