RNA–Protein interactions for RNA: ENST00000374116.3

HMGA1-203, Transcript of high mobility group AT-hook 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene HMGA1, Length 1,848 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA1-203ENST00000374116 PRNPP04156 253 aa14.04□□□□□ -0.16
HMGA1-203ENST00000374116 CAPNS1P04632 268 aa14.04□□□□□ -0.16
HMGA1-203ENST00000374116 CDH2P19022 906 aaPredicted RBP14.04□□□□□ -0.16
HMGA1-203ENST00000374116 IMPDH1P20839 514 aa14.04□□□□□ -0.16
HMGA1-203ENST00000374116 ACSL1P33121 698 aa14.04□□□□□ -0.16
HMGA1-203ENST00000374116 HSPA13P48723 471 aa14.04□□□□□ -0.16
HMGA1-203ENST00000374116 SUOXP51687 545 aa14.04□□□□□ -0.16
HMGA1-203ENST00000374116 MTTPP55157 894 aa14.04□□□□□ -0.16
HMGA1-203ENST00000374116 TIAL1Q01085 375 aaKnown RBP eCLIP14.04□□□□□ -0.16
HMGA1-203ENST00000374116 RAD51Q06609 339 aa14.04□□□□□ -0.16
HMGA1-203ENST00000374116 PTPRCAPQ14761 206 aa14.04□□□□□ -0.16
HMGA1-203ENST00000374116 TLR1Q15399 786 aa14.04□□□□□ -0.16
HMGA1-203ENST00000374116 TYSND1Q2T9J0 566 aa14.04□□□□□ -0.16
HMGA1-203ENST00000374116 TMEM207Q6UWW9 146 aa14.04□□□□□ -0.16
HMGA1-203ENST00000374116 CCDC80Q76M96 950 aa14.04□□□□□ -0.16
HMGA1-203ENST00000374116 SNX32Q86XE0 403 aa14.04□□□□□ -0.16
HMGA1-203ENST00000374116 PNPLA1Q8N8W4 532 aa14.04□□□□□ -0.16
HMGA1-203ENST00000374116 PRSS33Q8NF86 280 aa14.04□□□□□ -0.16
HMGA1-203ENST00000374116 OR13C4Q8NGS5 318 aa14.04□□□□□ -0.16
HMGA1-203ENST00000374116 OR4L1Q8NH43 312 aa14.04□□□□□ -0.16
HMGA1-203ENST00000374116 C17orf50Q8WW18 174 aa14.04□□□□□ -0.16
HMGA1-203ENST00000374116 CDKN2AIPNLQ96HQ2 116 aa14.04□□□□□ -0.16
HMGA1-203ENST00000374116 ZBTB26Q9HCK0 441 aa14.04□□□□□ -0.16
HMGA1-203ENST00000374116 NLE1Q9NVX2 485 aaPredicted RBP14.04□□□□□ -0.16
HMGA1-203ENST00000374116 ITM2BQ9Y287 266 aa14.04□□□□□ -0.16
HMGA1-203ENST00000374116 CEPT1Q9Y6K0 416 aa14.04□□□□□ -0.16
HMGA1-203ENST00000374116 FRYLO94915 3013 aa14.03□□□□□ -0.16
HMGA1-203ENST00000374116 GOLGA8CPA6NN73 597 aa14.03□□□□□ -0.16
HMGA1-203ENST00000374116 C1QTNF3-AMACRE9PGA6 284 aa14.03□□□□□ -0.16
HMGA1-203ENST00000374116 H3BNX3 289 aa14.03□□□□□ -0.16
HMGA1-203ENST00000374116 SDHDO14521 159 aa14.03□□□□□ -0.16
HMGA1-203ENST00000374116 DNAJA2O60884 412 aa14.03□□□□□ -0.16
HMGA1-203ENST00000374116 JUNP05412 331 aaKnown RBP14.03□□□□□ -0.16
HMGA1-203ENST00000374116 BCKDHBP21953 392 aa14.03□□□□□ -0.16
HMGA1-203ENST00000374116 P2RY2P41231 377 aa14.03□□□□□ -0.16
HMGA1-203ENST00000374116 NFKB2Q00653 900 aa14.03□□□□□ -0.16
HMGA1-203ENST00000374116 BCL2L1Q07817 233 aa14.03□□□□□ -0.16
HMGA1-203ENST00000374116 PEX6Q13608 980 aa14.03□□□□□ -0.16
HMGA1-203ENST00000374116 SEMA3AQ14563 771 aa14.03□□□□□ -0.16
HMGA1-203ENST00000374116 TAF1AQ15573 450 aaPredicted RBP14.03□□□□□ -0.16
HMGA1-203ENST00000374116 TRIP10Q15642 601 aa14.03□□□□□ -0.16
HMGA1-203ENST00000374116 PARS2Q7L3T8 475 aaKnown RBP14.03□□□□□ -0.16
HMGA1-203ENST00000374116 DSG4Q86SJ6 1040 aa14.03□□□□□ -0.16
HMGA1-203ENST00000374116 ISCA2Q86U28 154 aa14.03□□□□□ -0.16
HMGA1-203ENST00000374116 PLPP6Q8IY26 295 aa14.03□□□□□ -0.16
HMGA1-203ENST00000374116 TMIEQ8NEW7 156 aa14.03□□□□□ -0.16
HMGA1-203ENST00000374116 L3HYPDHQ96EM0 354 aa14.03□□□□□ -0.16
HMGA1-203ENST00000374116 SERPINI1Q99574 410 aa14.03□□□□□ -0.16
HMGA1-203ENST00000374116 SUV39H2Q9H5I1 410 aa14.03□□□□□ -0.16
HMGA1-203ENST00000374116 CYP4F12Q9HCS2 524 aa14.03□□□□□ -0.16
HMGA1-203ENST00000374116 DDX18Q9NVP1 670 aaKnown RBP14.03□□□□□ -0.16
HMGA1-203ENST00000374116 INTS10Q9NVR2 710 aaKnown RBP14.03□□□□□ -0.16
HMGA1-203ENST00000374116 POMPQ9Y244 141 aa14.03□□□□□ -0.16
HMGA1-203ENST00000374116 CRYL1Q9Y2S2 319 aa14.03□□□□□ -0.16
HMGA1-203ENST00000374116 PCDHB9Q9Y5E1 797 aa14.03□□□□□ -0.16
HMGA1-203ENST00000374116 RAI2Q9Y5P3 530 aa14.03□□□□□ -0.16
HMGA1-203ENST00000374116 R4GN57 208 aa14.03□□□□□ -0.16
HMGA1-203ENST00000374116 C16orf96A6NNT2 1141 aa14.02□□□□□ -0.16
HMGA1-203ENST00000374116 TMEM233B4DJY2 109 aa14.02□□□□□ -0.16
HMGA1-203ENST00000374116 AIM2O14862 343 aa14.02□□□□□ -0.16
HMGA1-203ENST00000374116 HRO43593 1189 aa14.02□□□□□ -0.16
HMGA1-203ENST00000374116 PIRTP0C851 137 aa14.02□□□□□ -0.16
HMGA1-203ENST00000374116 C5AR1P21730 350 aa14.02□□□□□ -0.16
HMGA1-203ENST00000374116 PCSK6P29122 969 aa14.02□□□□□ -0.16
HMGA1-203ENST00000374116 PMLP29590 882 aa14.02□□□□□ -0.16
HMGA1-203ENST00000374116 NUDT2P50583 147 aa14.02□□□□□ -0.16
HMGA1-203ENST00000374116 CDK9P50750 372 aaKnown RBP14.02□□□□□ -0.16
HMGA1-203ENST00000374116 STC1P52823 247 aa14.02□□□□□ -0.16
HMGA1-203ENST00000374116 TCF15Q12870 199 aa14.02□□□□□ -0.16
HMGA1-203ENST00000374116 LPAL2Q16609 132 aa14.02□□□□□ -0.16
HMGA1-203ENST00000374116 MAP7D1Q3KQU3 841 aa14.02□□□□□ -0.16
HMGA1-203ENST00000374116 ZNF805Q5CZA5 627 aa14.02□□□□□ -0.16
HMGA1-203ENST00000374116 ZNF549Q6P9A3 640 aa14.02□□□□□ -0.16
HMGA1-203ENST00000374116 CUZD1Q86UP6 607 aa14.02□□□□□ -0.16
HMGA1-203ENST00000374116 KBTBD6Q86V97 674 aa14.02□□□□□ -0.16
HMGA1-203ENST00000374116 PYDC1Q8WXC3 89 aa14.02□□□□□ -0.16
HMGA1-203ENST00000374116 FAM122AQ96E09 287 aa14.02□□□□□ -0.16
HMGA1-203ENST00000374116 ALG9Q9H6U8 611 aa14.02□□□□□ -0.16
HMGA1-203ENST00000374116 ATP13A3Q9H7F0 1226 aa14.02□□□□□ -0.16
HMGA1-203ENST00000374116 MEAF6Q9HAF1 191 aa14.02□□□□□ -0.16
HMGA1-203ENST00000374116 ITM2CQ9NQX7 267 aa14.02□□□□□ -0.16
HMGA1-203ENST00000374116 FAM86C1Q9NVL1 165 aa14.02□□□□□ -0.16
HMGA1-203ENST00000374116 MBD1Q9UIS9 605 aaPredicted RBP14.02□□□□□ -0.16
HMGA1-203ENST00000374116 FBXO4Q9UKT5 387 aa14.02□□□□□ -0.16
HMGA1-203ENST00000374116 ANKRD66B4E2M5 251 aa14.01□□□□□ -0.17
HMGA1-203ENST00000374116 FZD6O60353 706 aa14.01□□□□□ -0.17
HMGA1-203ENST00000374116 SERPINB7O75635 380 aa14.01□□□□□ -0.17
HMGA1-203ENST00000374116 ADH1BP00325 375 aa14.01□□□□□ -0.17
HMGA1-203ENST00000374116 CD1DP15813 335 aa14.01□□□□□ -0.17
HMGA1-203ENST00000374116 CSNK1DP48730 415 aa14.01□□□□□ -0.17
HMGA1-203ENST00000374116 BCL2A1Q16548 175 aa14.01□□□□□ -0.17
HMGA1-203ENST00000374116 AGBL4Q5VU57 503 aa14.01□□□□□ -0.17
HMGA1-203ENST00000374116 FAM46CQ5VWP2 391 aa14.01□□□□□ -0.17
HMGA1-203ENST00000374116 TMEM198Q66K66 360 aa14.01□□□□□ -0.17
HMGA1-203ENST00000374116 CHSY3Q70JA7 882 aa14.01□□□□□ -0.17
HMGA1-203ENST00000374116 HPS6Q86YV9 775 aa14.01□□□□□ -0.17
HMGA1-203ENST00000374116 TICAM1Q8IUC6 712 aa14.01□□□□□ -0.17
HMGA1-203ENST00000374116 DSELQ8IZU8 1212 aa14.01□□□□□ -0.17
HMGA1-203ENST00000374116 PELI3Q8N2H9 469 aa14.01□□□□□ -0.17
HMGA1-203ENST00000374116 OR14C36Q8NHC7 312 aa14.01□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms