RNA–Protein interactions for RNA: ENST00000372577.2

NUP188-201, Transcript of nucleoporin 188, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NUP188, Length 5,689 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP188-201ENST00000372577 MCMBPQ9BTE3 642 aa10.32□□□□□ -0.76
NUP188-201ENST00000372577 LINC00854A0A1B0GVQ3 168 aa10.32□□□□□ -0.76
NUP188-201ENST00000372577 A0A1W2PQ45 241 aaPredicted RBP10.32□□□□□ -0.76
NUP188-201ENST00000372577 A0A1W2PQY0 241 aa10.32□□□□□ -0.76
NUP188-201ENST00000372577 CHST10O43529 356 aa10.32□□□□□ -0.76
NUP188-201ENST00000372577 LATS1O95835 1130 aa10.32□□□□□ -0.76
NUP188-201ENST00000372577 CAPGP40121 348 aa10.32□□□□□ -0.76
NUP188-201ENST00000372577 CBR4Q8N4T8 237 aa10.32□□□□□ -0.76
NUP188-201ENST00000372577 KLHL23Q8NBE8 558 aa10.32□□□□□ -0.76
NUP188-201ENST00000372577 OR10G6Q8NH81 332 aa10.32□□□□□ -0.76
NUP188-201ENST00000372577 ZNF671Q8TAW3 534 aa10.32□□□□□ -0.76
NUP188-201ENST00000372577 NUS1Q96E22 293 aa10.32□□□□□ -0.76
NUP188-201ENST00000372577 WRAP53Q9BUR4 548 aaKnown RBP10.32□□□□□ -0.76
NUP188-201ENST00000372577 YTHDF1Q9BYJ9 559 aaKnown RBP10.32□□□□□ -0.76
NUP188-201ENST00000372577 CD84Q9UIB8 345 aa10.32□□□□□ -0.76
NUP188-201ENST00000372577 TRIM43BA6NCK2 446 aa10.31□□□□□ -0.76
NUP188-201ENST00000372577 PITPNM1O00562 1244 aa10.31□□□□□ -0.76
NUP188-201ENST00000372577 ITM2AO43736 263 aa10.31□□□□□ -0.76
NUP188-201ENST00000372577 SOCS5O75159 536 aa10.31□□□□□ -0.76
NUP188-201ENST00000372577 SLC25A12O75746 678 aa10.31□□□□□ -0.76
NUP188-201ENST00000372577 MYL9P24844 172 aa10.31□□□□□ -0.76
NUP188-201ENST00000372577 NDUFS1P28331 727 aa10.31□□□□□ -0.76
NUP188-201ENST00000372577 MSX2P35548 267 aaPredicted RBP10.31□□□□□ -0.76
NUP188-201ENST00000372577 PLA2G4EQ3MJ16 856 aa10.31□□□□□ -0.76
NUP188-201ENST00000372577 UBXN11Q5T124 520 aa10.31□□□□□ -0.76
NUP188-201ENST00000372577 ZNF697Q5TEC3 545 aa10.31□□□□□ -0.76
NUP188-201ENST00000372577 CAND1Q86VP6 1230 aaKnown RBP10.31□□□□□ -0.76
NUP188-201ENST00000372577 ZNF513Q8N8E2 541 aaPredicted RBP10.31□□□□□ -0.76
NUP188-201ENST00000372577 TSPEARQ8WU66 669 aa10.31□□□□□ -0.76
NUP188-201ENST00000372577 TRIM63Q969Q1 353 aa10.31□□□□□ -0.76
NUP188-201ENST00000372577 SCLYQ96I15 445 aa10.31□□□□□ -0.76
NUP188-201ENST00000372577 SESN1Q9Y6P5 492 aa10.31□□□□□ -0.76
NUP188-201ENST00000372577 HMGB3O15347 200 aaKnown RBP10.31□□□□□ -0.76
NUP188-201ENST00000372577 FAM189A1O60320 539 aa10.31□□□□□ -0.76
NUP188-201ENST00000372577 ALOX5P09917 674 aa10.31□□□□□ -0.76
NUP188-201ENST00000372577 CDH1P12830 882 aa10.31□□□□□ -0.76
NUP188-201ENST00000372577 CCND3P30281 292 aaPredicted RBP10.31□□□□□ -0.76
NUP188-201ENST00000372577 NRG1Q02297 640 aaPredicted RBP10.31□□□□□ -0.76
NUP188-201ENST00000372577 FPGSQ05932 587 aa10.31□□□□□ -0.76
NUP188-201ENST00000372577 IFI44LQ53G44 452 aa10.31□□□□□ -0.76
NUP188-201ENST00000372577 SPIN4Q56A73 249 aa10.31□□□□□ -0.76
NUP188-201ENST00000372577 CXXC5Q7LFL8 322 aaKnown RBP10.31□□□□□ -0.76
NUP188-201ENST00000372577 TMC8Q8IU68 726 aa10.31□□□□□ -0.76
NUP188-201ENST00000372577 ZZZ3Q8IYH5 903 aa10.31□□□□□ -0.76
NUP188-201ENST00000372577 CELF5Q8N6W0 485 aaKnown RBP10.31□□□□□ -0.76
NUP188-201ENST00000372577 OR5K1Q8NHB7 308 aa10.31□□□□□ -0.76
NUP188-201ENST00000372577 PIH1D2Q8WWB5 315 aa10.31□□□□□ -0.76
NUP188-201ENST00000372577 OTUB2Q96DC9 234 aa10.31□□□□□ -0.76
NUP188-201ENST00000372577 TRIB3Q96RU7 358 aa10.31□□□□□ -0.76
NUP188-201ENST00000372577 PTGFRNQ9P2B2 879 aa10.31□□□□□ -0.76
NUP188-201ENST00000372577 SLC7A8Q9UHI5 535 aa10.31□□□□□ -0.76
NUP188-201ENST00000372577 MAST2Q6P0Q8 1798 aa10.31□□□□□ -0.76
NUP188-201ENST00000372577 GTPBP1O00178 669 aaKnown RBP10.31□□□□□ -0.76
NUP188-201ENST00000372577 ZNF24P17028 368 aa10.31□□□□□ -0.76
NUP188-201ENST00000372577 UGT1A5P35504 534 aa10.31□□□□□ -0.76
NUP188-201ENST00000372577 ACVRL1P37023 503 aa10.31□□□□□ -0.76
NUP188-201ENST00000372577 NFKB2Q00653 900 aa10.31□□□□□ -0.76
NUP188-201ENST00000372577 KCNC3Q14003 757 aa10.31□□□□□ -0.76
NUP188-201ENST00000372577 MYLK3Q32MK0 819 aa10.31□□□□□ -0.76
NUP188-201ENST00000372577 FAM174BQ3ZCQ3 159 aa10.31□□□□□ -0.76
NUP188-201ENST00000372577 PLEKHG4Q58EX7 1191 aa10.31□□□□□ -0.76
NUP188-201ENST00000372577 ACSBG2Q5FVE4 666 aa10.31□□□□□ -0.76
NUP188-201ENST00000372577 AMZ2Q86W34 360 aa10.31□□□□□ -0.76
NUP188-201ENST00000372577 OR14C36Q8NHC7 312 aa10.31□□□□□ -0.76
NUP188-201ENST00000372577 LRTOMTQ8WZ04 291 aa10.31□□□□□ -0.76
NUP188-201ENST00000372577 ZBED6CLQ96FA7 236 aaPredicted RBP10.31□□□□□ -0.76
NUP188-201ENST00000372577 ITGB1BP2Q9UKP3 347 aa10.31□□□□□ -0.76
NUP188-201ENST00000372577 DCLK1O15075 740 aa10.31□□□□□ -0.76
NUP188-201ENST00000372577 AP2A2O94973 939 aa10.31□□□□□ -0.76
NUP188-201ENST00000372577 RPL4P36578 427 aaKnown RBP10.31□□□□□ -0.76
NUP188-201ENST00000372577 ITGADQ13349 1161 aa10.31□□□□□ -0.76
NUP188-201ENST00000372577 TMEM44Q2T9K0 475 aa10.31□□□□□ -0.76
NUP188-201ENST00000372577 EML3Q32P44 896 aa10.31□□□□□ -0.76
NUP188-201ENST00000372577 DCST1Q5T197 706 aa10.31□□□□□ -0.76
NUP188-201ENST00000372577 C10orf62Q5T681 223 aaPredicted RBP10.31□□□□□ -0.76
NUP188-201ENST00000372577 C6orf89Q6UWU4 347 aa10.31□□□□□ -0.76
NUP188-201ENST00000372577 TMEM126BQ8IUX1 230 aa10.31□□□□□ -0.76
NUP188-201ENST00000372577 SMG8Q8ND04 991 aaKnown RBP10.31□□□□□ -0.76
NUP188-201ENST00000372577 ANKRD49Q8WVL7 239 aa10.31□□□□□ -0.76
NUP188-201ENST00000372577 KCNJ9Q92806 393 aa10.31□□□□□ -0.76
NUP188-201ENST00000372577 SLC38A4Q969I6 547 aa10.31□□□□□ -0.76
NUP188-201ENST00000372577 SLC22A18Q96BI1 424 aa10.31□□□□□ -0.76
NUP188-201ENST00000372577 RPL10LQ96L21 214 aaKnown RBP10.31□□□□□ -0.76
NUP188-201ENST00000372577 DUSP26Q9BV47 211 aa10.31□□□□□ -0.76
NUP188-201ENST00000372577 TJP1Q07157 1748 aa10.31□□□□□ -0.76
NUP188-201ENST00000372577 DNAJC25-GNG10A0A024R161 153 aa10.31□□□□□ -0.76
NUP188-201ENST00000372577 PRORSD1PA6NEY8 169 aa10.31□□□□□ -0.76
NUP188-201ENST00000372577 CBFA2T3O75081 653 aa10.31□□□□□ -0.76
NUP188-201ENST00000372577 NIPSNAP2O75323 286 aa10.31□□□□□ -0.76
NUP188-201ENST00000372577 ITGAXP20702 1163 aa10.31□□□□□ -0.76
NUP188-201ENST00000372577 PEX2P28328 305 aa10.31□□□□□ -0.76
NUP188-201ENST00000372577 PCLAFQ15004 111 aa10.31□□□□□ -0.76
NUP188-201ENST00000372577 MBOAT1Q6ZNC8 495 aa10.31□□□□□ -0.76
NUP188-201ENST00000372577 IKBIPQ70UQ0 350 aa10.31□□□□□ -0.76
NUP188-201ENST00000372577 ZNF248Q8NDW4 579 aa10.31□□□□□ -0.76
NUP188-201ENST00000372577 GIPC3Q8TF64 312 aa10.31□□□□□ -0.76
NUP188-201ENST00000372577 RTP4Q96DX8 246 aa10.31□□□□□ -0.76
NUP188-201ENST00000372577 CCM2Q9BSQ5 444 aa10.31□□□□□ -0.76
NUP188-201ENST00000372577 CRISPLD1Q9H336 500 aa10.31□□□□□ -0.76
NUP188-201ENST00000372577 TMEM27Q9HBJ8 222 aa10.31□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms