RNA–Protein interactions for RNA: ENST00000372235.7

TMEM53-201, Transcript of transmembrane protein 53, humanhuman

TSL 2 BASIC

Gene TMEM53, Length 890 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM53-201ENST00000372235 SGSM3Q96HU1 749 aa18.38■□□□□ 0.53
TMEM53-201ENST00000372235 ANAPC5Q9UJX4 755 aa18.38■□□□□ 0.53
TMEM53-201ENST00000372235 POMT2Q9UKY4 750 aa18.38■□□□□ 0.53
TMEM53-201ENST00000372235 POLHQ9Y253 713 aa18.38■□□□□ 0.53
TMEM53-201ENST00000372235 TCRBV7S2A1N4TA0A589 114 aa18.37■□□□□ 0.53
TMEM53-201ENST00000372235 C2orf74A8MZ97 194 aa18.37■□□□□ 0.53
TMEM53-201ENST00000372235 CCL22O00626 93 aa18.37■□□□□ 0.53
TMEM53-201ENST00000372235 KLK3P07288 261 aaPredicted RBP18.37■□□□□ 0.53
TMEM53-201ENST00000372235 EBLN1P0CF75 366 aa18.37■□□□□ 0.53
TMEM53-201ENST00000372235 PRKAR1AP10644 381 aa18.37■□□□□ 0.53
TMEM53-201ENST00000372235 ZNF28P17035 718 aa18.37■□□□□ 0.53
TMEM53-201ENST00000372235 RPS15P62841 145 aaKnown RBP18.37■□□□□ 0.53
TMEM53-201ENST00000372235 PRAMEP78395 509 aa18.37■□□□□ 0.53
TMEM53-201ENST00000372235 DBN1Q16643 649 aa18.37■□□□□ 0.53
TMEM53-201ENST00000372235 SYTL3Q4VX76 610 aa18.37■□□□□ 0.53
TMEM53-201ENST00000372235 DUS1LQ6P1R4 473 aaKnown RBP18.37■□□□□ 0.53
TMEM53-201ENST00000372235 C16orf46Q6P387 395 aa18.37■□□□□ 0.53
TMEM53-201ENST00000372235 AMIGO1Q86WK6 493 aa18.37■□□□□ 0.53
TMEM53-201ENST00000372235 TMEM126BQ8IUX1 230 aa18.37■□□□□ 0.53
TMEM53-201ENST00000372235 TRIM58Q8NG06 486 aa18.37■□□□□ 0.53
TMEM53-201ENST00000372235 ATG4AQ8WYN0 398 aa18.37■□□□□ 0.53
TMEM53-201ENST00000372235 LRFN5Q96NI6 719 aa18.37■□□□□ 0.53
TMEM53-201ENST00000372235 RAB6BQ9NRW1 208 aa18.37■□□□□ 0.53
TMEM53-201ENST00000372235 IL17BQ9UHF5 180 aa18.37■□□□□ 0.53
TMEM53-201ENST00000372235 DRG1Q9Y295 367 aaKnown RBP18.37■□□□□ 0.53
TMEM53-201ENST00000372235 ATMQ13315 3056 aa18.37■□□□□ 0.53
TMEM53-201ENST00000372235 GSAPA4D1B5 854 aa18.36■□□□□ 0.53
TMEM53-201ENST00000372235 KATNA1O75449 491 aa18.36■□□□□ 0.53
TMEM53-201ENST00000372235 CREG1O75629 220 aa18.36■□□□□ 0.53
TMEM53-201ENST00000372235 SCRG1O75711 98 aa18.36■□□□□ 0.53
TMEM53-201ENST00000372235 POLR2CP19387 275 aaPredicted RBP18.36■□□□□ 0.53
TMEM53-201ENST00000372235 SHMT2P34897 504 aa18.36■□□□□ 0.53
TMEM53-201ENST00000372235 CDKN1CP49918 316 aaPredicted RBP18.36■□□□□ 0.53
TMEM53-201ENST00000372235 KPNA2P52292 529 aaKnown RBP18.36■□□□□ 0.53
TMEM53-201ENST00000372235 PPP1CAP62136 330 aa18.36■□□□□ 0.53
TMEM53-201ENST00000372235 DNASE1L3Q13609 305 aa18.36■□□□□ 0.53
TMEM53-201ENST00000372235 BOP1Q14137 746 aaKnown RBP18.36■□□□□ 0.53
TMEM53-201ENST00000372235 ZNF658BQ4V348 819 aaPredicted RBP18.36■□□□□ 0.53
TMEM53-201ENST00000372235 TSTD2Q5T7W7 516 aa18.36■□□□□ 0.53
TMEM53-201ENST00000372235 PWWP2BQ6NUJ5 590 aa18.36■□□□□ 0.53
TMEM53-201ENST00000372235 TBC1D21Q8IYX1 336 aa18.36■□□□□ 0.53
TMEM53-201ENST00000372235 CLDN19Q8N6F1 224 aa18.36■□□□□ 0.53
TMEM53-201ENST00000372235 PPHLN1Q8NEY8 458 aaKnown RBP18.36■□□□□ 0.53
TMEM53-201ENST00000372235 C9orf43Q8TAL5 461 aaPredicted RBP18.36■□□□□ 0.53
TMEM53-201ENST00000372235 CPT1BQ92523 772 aa18.36■□□□□ 0.53
TMEM53-201ENST00000372235 ELMO1Q92556 727 aa18.36■□□□□ 0.53
TMEM53-201ENST00000372235 EIF2B3Q9NR50 452 aaKnown RBP18.36■□□□□ 0.53
TMEM53-201ENST00000372235 SERTAD3Q9UJW9 196 aa18.36■□□□□ 0.53
TMEM53-201ENST00000372235 A0A0U1RQJ8 604 aa18.35■□□□□ 0.53
TMEM53-201ENST00000372235 SUV39H1O43463 412 aa18.35■□□□□ 0.53
TMEM53-201ENST00000372235 RPN2P04844 631 aa18.35■□□□□ 0.53
TMEM53-201ENST00000372235 APRTP07741 180 aa18.35■□□□□ 0.53
TMEM53-201ENST00000372235 HBQ1P09105 142 aa18.35■□□□□ 0.53
TMEM53-201ENST00000372235 PRDX3P30048 256 aaKnown RBP18.35■□□□□ 0.53
TMEM53-201ENST00000372235 FOXN2P32314 431 aa18.35■□□□□ 0.53
TMEM53-201ENST00000372235 ACVR1Q04771 509 aa18.35■□□□□ 0.53
TMEM53-201ENST00000372235 DEFB109BQ30KR1 87 aa18.35■□□□□ 0.53
TMEM53-201ENST00000372235 FASTKD1Q53R41 847 aaKnown RBP18.35■□□□□ 0.53
TMEM53-201ENST00000372235 ARMC3Q5W041 872 aa18.35■□□□□ 0.53
TMEM53-201ENST00000372235 PIANPQ8IYJ0 282 aa18.35■□□□□ 0.53
TMEM53-201ENST00000372235 LILRA3Q8N6C8 439 aaPredicted RBP18.35■□□□□ 0.53
TMEM53-201ENST00000372235 OR52E1Q8NGJ3 308 aa18.35■□□□□ 0.53
TMEM53-201ENST00000372235 OR4L1Q8NH43 312 aa18.35■□□□□ 0.53
TMEM53-201ENST00000372235 C1orf54Q8WWF1 131 aa18.35■□□□□ 0.53
TMEM53-201ENST00000372235 THAP4Q8WY91 577 aa18.35■□□□□ 0.53
TMEM53-201ENST00000372235 ZNF501Q96CX3 271 aaPredicted RBP18.35■□□□□ 0.53
TMEM53-201ENST00000372235 CASS4Q9NQ75 786 aa18.35■□□□□ 0.53
TMEM53-201ENST00000372235 ANAPC2Q9UJX6 822 aa18.35■□□□□ 0.53
TMEM53-201ENST00000372235 ASF1AQ9Y294 204 aa18.35■□□□□ 0.53
TMEM53-201ENST00000372235 CCDC162PA2VCL2 907 aa18.34■□□□□ 0.53
TMEM53-201ENST00000372235 MKRN2OSH3BPM6 223 aa18.34■□□□□ 0.53
TMEM53-201ENST00000372235 TERTO14746 1132 aaKnown RBP18.34■□□□□ 0.53
TMEM53-201ENST00000372235 OAS2P29728 719 aaKnown RBP18.34■□□□□ 0.53
TMEM53-201ENST00000372235 PREPP48147 710 aa18.34■□□□□ 0.53
TMEM53-201ENST00000372235 CDK16Q00536 496 aa18.34■□□□□ 0.53
TMEM53-201ENST00000372235 KCNC4Q03721 635 aa18.34■□□□□ 0.53
TMEM53-201ENST00000372235 KCNAB1Q14722 419 aa18.34■□□□□ 0.53
TMEM53-201ENST00000372235 CCDC38Q502W7 563 aa18.34■□□□□ 0.53
TMEM53-201ENST00000372235 PCID2Q5JVF3 399 aa18.34■□□□□ 0.53
TMEM53-201ENST00000372235 GSTA5Q7RTV2 222 aa18.34■□□□□ 0.53
TMEM53-201ENST00000372235 SYVN1Q86TM6 617 aa18.34■□□□□ 0.53
TMEM53-201ENST00000372235 TAB3Q8N5C8 712 aaPredicted RBP18.34■□□□□ 0.53
TMEM53-201ENST00000372235 OR13J1Q8NGT2 312 aa18.34■□□□□ 0.53
TMEM53-201ENST00000372235 OR6P1Q8NGX9 317 aa18.34■□□□□ 0.53
TMEM53-201ENST00000372235 HDAC10Q969S8 669 aa18.34■□□□□ 0.53
TMEM53-201ENST00000372235 DPH2Q9BQC3 489 aaPredicted RBP18.34■□□□□ 0.53
TMEM53-201ENST00000372235 PITPNM3Q9BZ71 974 aa18.34■□□□□ 0.53
TMEM53-201ENST00000372235 IL22Q9GZX6 179 aa18.34■□□□□ 0.53
TMEM53-201ENST00000372235 TWSG1Q9GZX9 223 aa18.34■□□□□ 0.53
TMEM53-201ENST00000372235 PIH1D1Q9NWS0 290 aaKnown RBP18.34■□□□□ 0.53
TMEM53-201ENST00000372235 OR6C2Q9NZP2 312 aa18.34■□□□□ 0.53
TMEM53-201ENST00000372235 TCAF1Q9Y4C2 921 aa18.34■□□□□ 0.53
TMEM53-201ENST00000372235 MRFAP1Q9Y605 127 aa18.34■□□□□ 0.53
TMEM53-201ENST00000372235 PIPSLA2A3N6 862 aa18.33■□□□□ 0.52
TMEM53-201ENST00000372235 CCDC78A2IDD5 438 aa18.33■□□□□ 0.52
TMEM53-201ENST00000372235 SLC9B1P1A6NJY1 282 aa18.33■□□□□ 0.52
TMEM53-201ENST00000372235 PFDN6O15212 129 aa18.33■□□□□ 0.52
TMEM53-201ENST00000372235 KALRNO60229 2985 aa18.33■□□□□ 0.52
TMEM53-201ENST00000372235 GOT2P00505 430 aaKnown RBP18.33■□□□□ 0.52
TMEM53-201ENST00000372235 PTPN4P29074 926 aa18.33■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms