RNA–Protein interactions for RNA: ENST00000372232.7

ATG4A-203, Transcript of autophagy related 4A cysteine peptidase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ATG4A, Length 2,315 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4A-203ENST00000372232 DEFA1P59665 94 aa8.71□□□□□ -1.01
ATG4A-203ENST00000372232 DEFA3P59666 94 aa8.71□□□□□ -1.01
ATG4A-203ENST00000372232 ABCE1P61221 599 aaKnown RBP8.71□□□□□ -1.01
ATG4A-203ENST00000372232 TNK1Q13470 666 aa8.71□□□□□ -1.01
ATG4A-203ENST00000372232 GPR50Q13585 617 aa8.71□□□□□ -1.01
ATG4A-203ENST00000372232 FAM214AQ32MH5 1076 aa8.71□□□□□ -1.01
ATG4A-203ENST00000372232 FASTKD1Q53R41 847 aaKnown RBP8.71□□□□□ -1.01
ATG4A-203ENST00000372232 STXBP5Q5T5C0 1151 aa8.71□□□□□ -1.01
ATG4A-203ENST00000372232 NXNL2Q5VZ03 156 aa8.71□□□□□ -1.01
ATG4A-203ENST00000372232 TRNP1Q6NT89 227 aa8.71□□□□□ -1.01
ATG4A-203ENST00000372232 PNCKQ6P2M8 343 aa8.71□□□□□ -1.01
ATG4A-203ENST00000372232 RANBP10Q6VN20 620 aa8.71□□□□□ -1.01
ATG4A-203ENST00000372232 LIAT1Q6ZQX7 453 aa8.71□□□□□ -1.01
ATG4A-203ENST00000372232 FAM183BPQ6ZVS7 135 aa8.71□□□□□ -1.01
ATG4A-203ENST00000372232 SPRED1Q7Z699 444 aa8.71□□□□□ -1.01
ATG4A-203ENST00000372232 RAB44Q7Z6P3 723 aaPredicted RBP8.71□□□□□ -1.01
ATG4A-203ENST00000372232 SLC26A11Q86WA9 606 aa8.71□□□□□ -1.01
ATG4A-203ENST00000372232 RFX6Q8HWS3 928 aa8.71□□□□□ -1.01
ATG4A-203ENST00000372232 RASGRP3Q8IV61 690 aa8.71□□□□□ -1.01
ATG4A-203ENST00000372232 ATAD1Q8NBU5 361 aa8.71□□□□□ -1.01
ATG4A-203ENST00000372232 FAM83FQ8NEG4 500 aaPredicted RBP8.71□□□□□ -1.01
ATG4A-203ENST00000372232 NDNFQ8TB73 568 aa8.71□□□□□ -1.01
ATG4A-203ENST00000372232 PPP1R13LQ8WUF5 828 aa8.71□□□□□ -1.01
ATG4A-203ENST00000372232 RXFP2Q8WXD0 754 aa8.71□□□□□ -1.01
ATG4A-203ENST00000372232 NXNL1Q96CM4 212 aa8.71□□□□□ -1.01
ATG4A-203ENST00000372232 LRRC39Q96DD0 335 aa8.71□□□□□ -1.01
ATG4A-203ENST00000372232 SLC47A1Q96FL8 570 aa8.71□□□□□ -1.01
ATG4A-203ENST00000372232 PIWIL1Q96J94 861 aaKnown RBP8.71□□□□□ -1.01
ATG4A-203ENST00000372232 MARK4Q96L34 752 aa8.71□□□□□ -1.01
ATG4A-203ENST00000372232 PEBP4Q96S96 227 aa8.71□□□□□ -1.01
ATG4A-203ENST00000372232 MRPL45Q9BRJ2 306 aaKnown RBP8.71□□□□□ -1.01
ATG4A-203ENST00000372232 SEC22CQ9BRL7 303 aa8.71□□□□□ -1.01
ATG4A-203ENST00000372232 TTPALQ9BTX7 342 aa8.71□□□□□ -1.01
ATG4A-203ENST00000372232 UCK2Q9BZX2 261 aa8.71□□□□□ -1.01
ATG4A-203ENST00000372232 RSAD1Q9HA92 442 aa8.71□□□□□ -1.01
ATG4A-203ENST00000372232 ZFYVE1Q9HBF4 777 aa8.71□□□□□ -1.01
ATG4A-203ENST00000372232 GBA2Q9HCG7 927 aaPredicted RBP8.71□□□□□ -1.01
ATG4A-203ENST00000372232 SDHAF3Q9NRP4 125 aa8.71□□□□□ -1.01
ATG4A-203ENST00000372232 CYP8B1Q9UNU6 501 aa8.71□□□□□ -1.01
ATG4A-203ENST00000372232 GINS2Q9Y248 185 aa8.71□□□□□ -1.01
ATG4A-203ENST00000372232 MRPS7Q9Y2R9 242 aaKnown RBP8.71□□□□□ -1.01
ATG4A-203ENST00000372232 ZSWIM8A7E2V4 1837 aa8.71□□□□□ -1.01
ATG4A-203ENST00000372232 CCDC163A0A0D9SF12 145 aa8.71□□□□□ -1.02
ATG4A-203ENST00000372232 APOL1O14791 398 aa8.71□□□□□ -1.02
ATG4A-203ENST00000372232 PPEF2O14830 753 aa8.71□□□□□ -1.02
ATG4A-203ENST00000372232 TIPRLO75663 272 aa8.71□□□□□ -1.02
ATG4A-203ENST00000372232 RASAL1O95294 804 aa8.71□□□□□ -1.02
ATG4A-203ENST00000372232 RBP1P09455 135 aa8.71□□□□□ -1.02
ATG4A-203ENST00000372232 ZNF250P15622 560 aa8.71□□□□□ -1.02
ATG4A-203ENST00000372232 CD1EP15812 388 aa8.71□□□□□ -1.02
ATG4A-203ENST00000372232 PDGFRAP16234 1089 aa8.71□□□□□ -1.02
ATG4A-203ENST00000372232 STMN1P16949 149 aa8.71□□□□□ -1.02
ATG4A-203ENST00000372232 F8A1P23610 371 aa8.71□□□□□ -1.02
ATG4A-203ENST00000372232 GPC1P35052 558 aa8.71□□□□□ -1.02
ATG4A-203ENST00000372232 RPL22P35268 128 aaKnown RBP8.71□□□□□ -1.02
ATG4A-203ENST00000372232 SCNN1GP51170 649 aa8.71□□□□□ -1.02
ATG4A-203ENST00000372232 VBP1P61758 197 aa8.71□□□□□ -1.02
ATG4A-203ENST00000372232 ADARB1P78563 741 aaKnown RBP8.71□□□□□ -1.02
ATG4A-203ENST00000372232 CDC42EP1Q00587 391 aa8.71□□□□□ -1.02
ATG4A-203ENST00000372232 SEMA3BQ13214 749 aa8.71□□□□□ -1.02
ATG4A-203ENST00000372232 ZNF267Q14586 743 aaPredicted RBP8.71□□□□□ -1.02
ATG4A-203ENST00000372232 ZBTB6Q15916 424 aa8.71□□□□□ -1.02
ATG4A-203ENST00000372232 GOLGA7BQ2TAP0 167 aa8.71□□□□□ -1.02
ATG4A-203ENST00000372232 ADPRMQ3LIE5 342 aa8.71□□□□□ -1.02
ATG4A-203ENST00000372232 PKDCCQ504Y2 493 aa8.71□□□□□ -1.02
ATG4A-203ENST00000372232 RAB6CQ53S08 254 aa8.71□□□□□ -1.02
ATG4A-203ENST00000372232 CYBRD1Q53TN4 286 aa8.71□□□□□ -1.02
ATG4A-203ENST00000372232 RBM48Q5RL73 367 aaKnown RBP8.71□□□□□ -1.02
ATG4A-203ENST00000372232 VWA5B1Q5TIE3 1220 aa8.71□□□□□ -1.02
ATG4A-203ENST00000372232 TMEM236Q5W0B7 351 aa8.71□□□□□ -1.02
ATG4A-203ENST00000372232 OR6B2Q6IFH4 312 aa8.71□□□□□ -1.02
ATG4A-203ENST00000372232 SLC27A1Q6PCB7 646 aa8.71□□□□□ -1.02
ATG4A-203ENST00000372232 EPGNQ6UW88 154 aa8.71□□□□□ -1.02
ATG4A-203ENST00000372232 TMPRSS9Q7Z410 1059 aa8.71□□□□□ -1.02
ATG4A-203ENST00000372232 PLEKHH3Q7Z736 793 aa8.71□□□□□ -1.02
ATG4A-203ENST00000372232 TLK2Q86UE8 772 aa8.71□□□□□ -1.02
ATG4A-203ENST00000372232 PPIL6Q8IXY8 311 aa8.71□□□□□ -1.02
ATG4A-203ENST00000372232 NAT8LQ8N9F0 302 aa8.71□□□□□ -1.02
ATG4A-203ENST00000372232 ZBTB44Q8NCP5 570 aa8.71□□□□□ -1.02
ATG4A-203ENST00000372232 MCUQ8NE86 351 aa8.71□□□□□ -1.02
ATG4A-203ENST00000372232 RAET1EQ8TD07 263 aa8.71□□□□□ -1.02
ATG4A-203ENST00000372232 CPT1BQ92523 772 aa8.71□□□□□ -1.02
ATG4A-203ENST00000372232 NCLNQ969V3 563 aa8.71□□□□□ -1.02
ATG4A-203ENST00000372232 AHCYL2Q96HN2 611 aaKnown RBP8.71□□□□□ -1.02
ATG4A-203ENST00000372232 BDH2Q9BUT1 245 aa8.71□□□□□ -1.02
ATG4A-203ENST00000372232 SARGQ9BW04 601 aa8.71□□□□□ -1.02
ATG4A-203ENST00000372232 ALOXE3Q9BYJ1 711 aa8.71□□□□□ -1.02
ATG4A-203ENST00000372232 RAB6CQ9H0N0 254 aa8.71□□□□□ -1.02
ATG4A-203ENST00000372232 FAM49AQ9H0Q0 323 aaPredicted RBP8.71□□□□□ -1.02
ATG4A-203ENST00000372232 ABCG4Q9H172 646 aa8.71□□□□□ -1.02
ATG4A-203ENST00000372232 CAMSAP3Q9P1Y5 1249 aaPredicted RBP8.71□□□□□ -1.02
ATG4A-203ENST00000372232 MBD2Q9UBB5 411 aa8.71□□□□□ -1.02
ATG4A-203ENST00000372232 TINAGQ9UJW2 476 aa8.71□□□□□ -1.02
ATG4A-203ENST00000372232 TMPRSS11EQ9UL52 423 aa8.71□□□□□ -1.02
ATG4A-203ENST00000372232 PLXNA1Q9UIW2 1896 aa8.7□□□□□ -1.02
ATG4A-203ENST00000372232 TCRBV9S1A1TA0A576 114 aa8.7□□□□□ -1.02
ATG4A-203ENST00000372232 E2F8A0AVK6 867 aa8.7□□□□□ -1.02
ATG4A-203ENST00000372232 I3L521 148 aa8.7□□□□□ -1.02
ATG4A-203ENST00000372232 NBNO60934 754 aa8.7□□□□□ -1.02
ATG4A-203ENST00000372232 GRAP2O75791 330 aa8.7□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms