RNA–Protein interactions for RNA: ENST00000371447.3

PDE6C-201, Transcript of phosphodiesterase 6C, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDE6C, Length 3,307 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6C-201ENST00000371447 EGLN2Q96KS0 407 aa11.53□□□□□ -0.56
PDE6C-201ENST00000371447 FAM210AQ96ND0 272 aa11.53□□□□□ -0.56
PDE6C-201ENST00000371447 MTERF1Q99551 399 aaKnown RBP11.53□□□□□ -0.56
PDE6C-201ENST00000371447 LIN28AQ9H9Z2 209 aaKnown RBP11.53□□□□□ -0.56
PDE6C-201ENST00000371447 ETAA1Q9NY74 926 aa11.53□□□□□ -0.56
PDE6C-201ENST00000371447 SLC25A13Q9UJS0 675 aa11.53□□□□□ -0.56
PDE6C-201ENST00000371447 CROCCQ5TZA2 2017 aa11.52□□□□□ -0.56
PDE6C-201ENST00000371447 CASQ2O14958 399 aaPredicted RBP11.52□□□□□ -0.56
PDE6C-201ENST00000371447 ADH1AP07327 375 aa11.52□□□□□ -0.56
PDE6C-201ENST00000371447 EPCAMP16422 314 aa11.52□□□□□ -0.56
PDE6C-201ENST00000371447 SLC7A1P30825 629 aa11.52□□□□□ -0.56
PDE6C-201ENST00000371447 RBBP5Q15291 538 aaKnown RBP11.52□□□□□ -0.56
PDE6C-201ENST00000371447 CNPY1Q3B7I2 92 aa11.52□□□□□ -0.56
PDE6C-201ENST00000371447 TMEM259Q4ZIN3 620 aa11.52□□□□□ -0.56
PDE6C-201ENST00000371447 ANKRD26P1Q6NSI1 321 aa11.52□□□□□ -0.56
PDE6C-201ENST00000371447 Q6ZNB5 142 aa11.52□□□□□ -0.56
PDE6C-201ENST00000371447 CMTR2Q8IYT2 770 aaKnown RBP11.52□□□□□ -0.56
PDE6C-201ENST00000371447 RGL4Q8IZJ4 473 aa11.52□□□□□ -0.56
PDE6C-201ENST00000371447 FBXL20Q96IG2 436 aa11.52□□□□□ -0.56
PDE6C-201ENST00000371447 DPY30Q9C005 99 aa11.52□□□□□ -0.56
PDE6C-201ENST00000371447 STX16O14662 325 aa11.52□□□□□ -0.57
PDE6C-201ENST00000371447 EI24O14681 340 aa11.52□□□□□ -0.57
PDE6C-201ENST00000371447 LEFTY1O75610 366 aa11.52□□□□□ -0.57
PDE6C-201ENST00000371447 STK16O75716 305 aa11.52□□□□□ -0.57
PDE6C-201ENST00000371447 PARNO95453 639 aaKnown RBP11.52□□□□□ -0.57
PDE6C-201ENST00000371447 HIST1H2AGP0C0S8 130 aaPredicted RBP11.52□□□□□ -0.57
PDE6C-201ENST00000371447 ZNF26P17031 533 aaPredicted RBP11.52□□□□□ -0.57
PDE6C-201ENST00000371447 HIST1H2ADP20671 130 aa11.52□□□□□ -0.57
PDE6C-201ENST00000371447 MNX1P50219 401 aaPredicted RBP11.52□□□□□ -0.57
PDE6C-201ENST00000371447 MESP2Q0VG99 397 aa11.52□□□□□ -0.57
PDE6C-201ENST00000371447 GPRC6AQ5T6X5 926 aa11.52□□□□□ -0.57
PDE6C-201ENST00000371447 GLYATQ6IB77 296 aa11.52□□□□□ -0.57
PDE6C-201ENST00000371447 SLC30A9Q6PML9 568 aa11.52□□□□□ -0.57
PDE6C-201ENST00000371447 CERS6Q6ZMG9 384 aa11.52□□□□□ -0.57
PDE6C-201ENST00000371447 TMEM125Q96AQ2 219 aa11.52□□□□□ -0.57
PDE6C-201ENST00000371447 HIST1H2AHQ96KK5 128 aa11.52□□□□□ -0.57
PDE6C-201ENST00000371447 APOLD1Q96LR9 279 aa11.52□□□□□ -0.57
PDE6C-201ENST00000371447 CCT7Q99832 543 aa11.52□□□□□ -0.57
PDE6C-201ENST00000371447 HIST1H2AJQ99878 128 aa11.52□□□□□ -0.57
PDE6C-201ENST00000371447 H2AFJQ9BTM1 129 aa11.52□□□□□ -0.57
PDE6C-201ENST00000371447 ELOVL6Q9H5J4 265 aa11.52□□□□□ -0.57
PDE6C-201ENST00000371447 LTB4R2Q9NPC1 389 aa11.52□□□□□ -0.57
PDE6C-201ENST00000371447 MRPL40Q9NQ50 206 aaKnown RBP11.52□□□□□ -0.57
PDE6C-201ENST00000371447 SPATS2LQ9NUQ6 558 aaKnown RBP11.52□□□□□ -0.57
PDE6C-201ENST00000371447 NUDT4Q9NZJ9 180 aa11.52□□□□□ -0.57
PDE6C-201ENST00000371447 LEF1Q9UJU2 399 aaPredicted RBP11.52□□□□□ -0.57
PDE6C-201ENST00000371447 PRKAB1Q9Y478 270 aa11.52□□□□□ -0.57
PDE6C-201ENST00000371447 ABHD14A-ACY1A0A1B0GW23 586 aa11.52□□□□□ -0.57
PDE6C-201ENST00000371447 C1QCP02747 245 aa11.52□□□□□ -0.57
PDE6C-201ENST00000371447 PABPC1P11940 636 aaKnown RBP11.52□□□□□ -0.57
PDE6C-201ENST00000371447 VIPR2P41587 438 aa11.52□□□□□ -0.57
PDE6C-201ENST00000371447 CLCN4P51793 760 aa11.52□□□□□ -0.57
PDE6C-201ENST00000371447 LAPTM4AQ15012 233 aa11.52□□□□□ -0.57
PDE6C-201ENST00000371447 PTCHD3Q3KNS1 767 aa11.52□□□□□ -0.57
PDE6C-201ENST00000371447 CMPK2Q5EBM0 449 aa11.52□□□□□ -0.57
PDE6C-201ENST00000371447 TMC5Q6UXY8 1006 aa11.52□□□□□ -0.57
PDE6C-201ENST00000371447 TMIGD2Q96BF3 282 aa11.52□□□□□ -0.57
PDE6C-201ENST00000371447 ROPN1LQ96C74 230 aa11.52□□□□□ -0.57
PDE6C-201ENST00000371447 HOPXQ9BPY8 73 aaPredicted RBP11.52□□□□□ -0.57
PDE6C-201ENST00000371447 RPF2Q9H7B2 306 aaKnown RBP11.52□□□□□ -0.57
PDE6C-201ENST00000371447 PARVBQ9HBI1 364 aa11.52□□□□□ -0.57
PDE6C-201ENST00000371447 PCDHB1Q9Y5F3 818 aa11.52□□□□□ -0.57
PDE6C-201ENST00000371447 TRIOO75962 3097 aa11.51□□□□□ -0.57
PDE6C-201ENST00000371447 FRMPD3Q5JV73 1810 aa11.51□□□□□ -0.57
PDE6C-201ENST00000371447 SDK1Q7Z5N4 2213 aa11.51□□□□□ -0.57
PDE6C-201ENST00000371447 CHD5Q8TDI0 1954 aa11.51□□□□□ -0.57
PDE6C-201ENST00000371447 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP11.51□□□□□ -0.57
PDE6C-201ENST00000371447 SNUPNO95149 360 aaKnown RBP11.51□□□□□ -0.57
PDE6C-201ENST00000371447 FASP25445 335 aa11.51□□□□□ -0.57
PDE6C-201ENST00000371447 B4GALNT1Q00973 533 aa11.51□□□□□ -0.57
PDE6C-201ENST00000371447 TRAF3Q13114 568 aa11.51□□□□□ -0.57
PDE6C-201ENST00000371447 NADK2Q4G0N4 442 aa11.51□□□□□ -0.57
PDE6C-201ENST00000371447 TCEAL5Q5H9L2 206 aa11.51□□□□□ -0.57
PDE6C-201ENST00000371447 GRAMD4Q6IC98 578 aa11.51□□□□□ -0.57
PDE6C-201ENST00000371447 HSD11B1LQ7Z5J1 315 aa11.51□□□□□ -0.57
PDE6C-201ENST00000371447 HS3ST5Q8IZT8 346 aa11.51□□□□□ -0.57
PDE6C-201ENST00000371447 TMEM199Q8N511 208 aa11.51□□□□□ -0.57
PDE6C-201ENST00000371447 ZNF784Q8NCA9 323 aaPredicted RBP11.51□□□□□ -0.57
PDE6C-201ENST00000371447 ZNF382Q96SR6 550 aa11.51□□□□□ -0.57
PDE6C-201ENST00000371447 HERC2P3Q9BVR0 1158 aa11.51□□□□□ -0.57
PDE6C-201ENST00000371447 RIOK2Q9BVS4 552 aaKnown RBP11.51□□□□□ -0.57
PDE6C-201ENST00000371447 VAPAQ9P0L0 249 aa11.51□□□□□ -0.57
PDE6C-201ENST00000371447 LIMD1Q9UGP4 676 aa11.51□□□□□ -0.57
PDE6C-201ENST00000371447 UTS2RQ9UKP6 389 aa11.51□□□□□ -0.57
PDE6C-201ENST00000371447 WASH3PC4AMC7 463 aa11.51□□□□□ -0.57
PDE6C-201ENST00000371447 GMNNO75496 209 aa11.51□□□□□ -0.57
PDE6C-201ENST00000371447 GBAP04062 536 aa11.51□□□□□ -0.57
PDE6C-201ENST00000371447 RHOP08100 348 aa11.51□□□□□ -0.57
PDE6C-201ENST00000371447 RCAN2Q14206 197 aa11.51□□□□□ -0.57
PDE6C-201ENST00000371447 GRIN2CQ14957 1233 aa11.51□□□□□ -0.57
PDE6C-201ENST00000371447 MAPKAPK3Q16644 382 aa11.51□□□□□ -0.57
PDE6C-201ENST00000371447 ADNP2Q6IQ32 1131 aa11.51□□□□□ -0.57
PDE6C-201ENST00000371447 TPRG1Q6ZUI0 275 aa11.51□□□□□ -0.57
PDE6C-201ENST00000371447 SPATA19Q7Z5L4 167 aa11.51□□□□□ -0.57
PDE6C-201ENST00000371447 CLEC4FQ8N1N0 589 aa11.51□□□□□ -0.57
PDE6C-201ENST00000371447 FAM86B1Q8N7N1 296 aa11.51□□□□□ -0.57
PDE6C-201ENST00000371447 FIBINQ8TAL6 211 aa11.51□□□□□ -0.57
PDE6C-201ENST00000371447 POF1BQ8WVV4 589 aa11.51□□□□□ -0.57
PDE6C-201ENST00000371447 RHBDF1Q96CC6 855 aa11.51□□□□□ -0.57
PDE6C-201ENST00000371447 OR52E6Q96RD3 313 aa11.51□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms