RNA–Protein interactions for RNA: ENST00000371429.3

NDC1-201, Transcript of NDC1 transmembrane nucleoporin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NDC1, Length 5,134 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDC1-201ENST00000371429 ADAMTS5Q9UNA0 930 aa14.49□□□□□ -0.09
NDC1-201ENST00000371429 RPL26L1Q9UNX3 145 aaKnown RBP14.49□□□□□ -0.09
NDC1-201ENST00000371429 U3KQV3 271 aa14.49□□□□□ -0.09
NDC1-201ENST00000371429 IGKV6-21A0A0C4DH24 114 aa14.48□□□□□ -0.09
NDC1-201ENST00000371429 A0A0J9YVX5 310 aa14.48□□□□□ -0.09
NDC1-201ENST00000371429 C9JVG2 144 aa14.48□□□□□ -0.09
NDC1-201ENST00000371429 MED26O95402 600 aa14.48□□□□□ -0.09
NDC1-201ENST00000371429 CA3P07451 260 aa14.48□□□□□ -0.09
NDC1-201ENST00000371429 MLLT3P42568 568 aaPredicted RBP14.48□□□□□ -0.09
NDC1-201ENST00000371429 MYBPC1Q00872 1141 aa14.48□□□□□ -0.09
NDC1-201ENST00000371429 RING1Q06587 406 aa14.48□□□□□ -0.09
NDC1-201ENST00000371429 RALGDSQ12967 914 aa14.48□□□□□ -0.09
NDC1-201ENST00000371429 SLBPQ14493 270 aaKnown RBP eCLIP14.48□□□□□ -0.09
NDC1-201ENST00000371429 ARMC4Q5T2S8 1044 aa14.48□□□□□ -0.09
NDC1-201ENST00000371429 RASGRP3Q8IV61 690 aa14.48□□□□□ -0.09
NDC1-201ENST00000371429 APLFQ8IW19 511 aaPredicted RBP14.48□□□□□ -0.09
NDC1-201ENST00000371429 TMEM40Q8WWA1 233 aa14.48□□□□□ -0.09
NDC1-201ENST00000371429 CALML5Q9NZT1 146 aa14.48□□□□□ -0.09
NDC1-201ENST00000371429 COL2A1P02458 1487 aaPredicted RBP14.48□□□□□ -0.09
NDC1-201ENST00000371429 A0A0D9SEW6 157 aa14.48□□□□□ -0.09
NDC1-201ENST00000371429 LOC100506127A0A0U1RQW1 187 aa14.48□□□□□ -0.09
NDC1-201ENST00000371429 FAM86C2PA6NEL3 165 aa14.48□□□□□ -0.09
NDC1-201ENST00000371429 EFCAB10A6NFE3 127 aa14.48□□□□□ -0.09
NDC1-201ENST00000371429 MGRN1O60291 552 aa14.48□□□□□ -0.09
NDC1-201ENST00000371429 MSX2P35548 267 aaPredicted RBP14.48□□□□□ -0.09
NDC1-201ENST00000371429 TM4SF4P48230 202 aa14.48□□□□□ -0.09
NDC1-201ENST00000371429 GKN2Q86XP6 184 aa14.48□□□□□ -0.09
NDC1-201ENST00000371429 CLDN19Q8N6F1 224 aa14.48□□□□□ -0.09
NDC1-201ENST00000371429 NAT8LQ8N9F0 302 aa14.48□□□□□ -0.09
NDC1-201ENST00000371429 SMPDL3AQ92484 453 aa14.48□□□□□ -0.09
NDC1-201ENST00000371429 TMEM109Q9BVC6 243 aa14.48□□□□□ -0.09
NDC1-201ENST00000371429 DNAJC25-GNG10A0A024R161 153 aa14.48□□□□□ -0.09
NDC1-201ENST00000371429 KMOO15229 486 aa14.48□□□□□ -0.09
NDC1-201ENST00000371429 NPHS1O60500 1241 aa14.48□□□□□ -0.09
NDC1-201ENST00000371429 ENTPD5O75356 428 aa14.48□□□□□ -0.09
NDC1-201ENST00000371429 HNMTP50135 292 aa14.48□□□□□ -0.09
NDC1-201ENST00000371429 ATP12AP54707 1039 aa14.48□□□□□ -0.09
NDC1-201ENST00000371429 TMCO2Q7Z6W1 182 aaPredicted RBP14.48□□□□□ -0.09
NDC1-201ENST00000371429 C14orf80Q86SX3 495 aa14.48□□□□□ -0.09
NDC1-201ENST00000371429 ZNF781Q8N8C0 355 aa14.48□□□□□ -0.09
NDC1-201ENST00000371429 ZBED6CLQ96FA7 236 aaPredicted RBP14.48□□□□□ -0.09
NDC1-201ENST00000371429 PTGFRNQ9P2B2 879 aa14.48□□□□□ -0.09
NDC1-201ENST00000371429 LGALS13Q9UHV8 139 aa14.48□□□□□ -0.09
NDC1-201ENST00000371429 ELOVL7A1L3X0 281 aa14.48□□□□□ -0.09
NDC1-201ENST00000371429 RPS14P62263 151 aaKnown RBP14.48□□□□□ -0.09
NDC1-201ENST00000371429 ZNF33AQ06730 810 aa14.48□□□□□ -0.09
NDC1-201ENST00000371429 SLC9A4Q6AI14 798 aa14.48□□□□□ -0.09
NDC1-201ENST00000371429 ISLR2Q6UXK2 745 aa14.48□□□□□ -0.09
NDC1-201ENST00000371429 ZNF540Q8NDQ6 660 aa14.48□□□□□ -0.09
NDC1-201ENST00000371429 ADAP2Q9NPF8 381 aa14.48□□□□□ -0.09
NDC1-201ENST00000371429 TOR4AQ9NXH8 423 aa14.48□□□□□ -0.09
NDC1-201ENST00000371429 OGDHLQ9ULD0 1010 aa14.48□□□□□ -0.09
NDC1-201ENST00000371429 TELO2Q9Y4R8 837 aa14.48□□□□□ -0.09
NDC1-201ENST00000371429 IGKV6D-21A0A0A0MT36 114 aa14.47□□□□□ -0.09
NDC1-201ENST00000371429 C2orf71A6NGG8 1288 aa14.47□□□□□ -0.09
NDC1-201ENST00000371429 PRKCHP24723 683 aa14.47□□□□□ -0.09
NDC1-201ENST00000371429 COX10Q12887 443 aa14.47□□□□□ -0.09
NDC1-201ENST00000371429 COX18Q8N8Q8 333 aa14.47□□□□□ -0.09
NDC1-201ENST00000371429 MYDGFQ969H8 173 aa14.47□□□□□ -0.09
NDC1-201ENST00000371429 C1orf74Q96LT6 269 aa14.47□□□□□ -0.09
NDC1-201ENST00000371429 TAPBPLQ9BX59 468 aa14.47□□□□□ -0.09
NDC1-201ENST00000371429 SSU72Q9NP77 194 aaKnown RBP14.47□□□□□ -0.09
NDC1-201ENST00000371429 TMEM98Q9Y2Y6 226 aa14.47□□□□□ -0.09
NDC1-201ENST00000371429 PCDHB11Q9Y5F2 797 aa14.47□□□□□ -0.09
NDC1-201ENST00000371429 ZNF840PA6NDX5 716 aa14.47□□□□□ -0.09
NDC1-201ENST00000371429 XKRYO14609 159 aa14.47□□□□□ -0.09
NDC1-201ENST00000371429 HOXA11P31270 313 aaPredicted RBP14.47□□□□□ -0.09
NDC1-201ENST00000371429 ELF3P78545 371 aaPredicted RBP14.47□□□□□ -0.09
NDC1-201ENST00000371429 TBC1D21Q8IYX1 336 aa14.47□□□□□ -0.09
NDC1-201ENST00000371429 KCT2Q8NC54 265 aa14.47□□□□□ -0.09
NDC1-201ENST00000371429 ZFRQ96KR1 1074 aaKnown RBP14.47□□□□□ -0.09
NDC1-201ENST00000371429 CDADC1Q9BWV3 514 aa14.47□□□□□ -0.09
NDC1-201ENST00000371429 PDPK1O15530 556 aa14.47□□□□□ -0.09
NDC1-201ENST00000371429 IFNW1P05000 195 aa14.47□□□□□ -0.09
NDC1-201ENST00000371429 EFNA1P20827 205 aaPredicted RBP14.47□□□□□ -0.09
NDC1-201ENST00000371429 KCNJ2P63252 427 aa14.47□□□□□ -0.09
NDC1-201ENST00000371429 MBOAT1Q6ZNC8 495 aa14.47□□□□□ -0.09
NDC1-201ENST00000371429 Q6ZVL8 140 aa14.47□□□□□ -0.09
NDC1-201ENST00000371429 NUDT13Q86X67 352 aa14.47□□□□□ -0.09
NDC1-201ENST00000371429 IZUMO1Q8IYV9 350 aa14.47□□□□□ -0.09
NDC1-201ENST00000371429 MIEF2Q96C03 454 aa14.47□□□□□ -0.09
NDC1-201ENST00000371429 NFKBIL1Q9UBC1 381 aaPredicted RBP14.47□□□□□ -0.09
NDC1-201ENST00000371429 A8MU76 341 aa14.47□□□□□ -0.09
NDC1-201ENST00000371429 SAP18O00422 153 aaKnown RBP14.47□□□□□ -0.09
NDC1-201ENST00000371429 CCNA2P20248 432 aa14.47□□□□□ -0.09
NDC1-201ENST00000371429 CCKBRP32239 447 aa14.47□□□□□ -0.09
NDC1-201ENST00000371429 NUP62P37198 522 aaPredicted RBP14.47□□□□□ -0.09
NDC1-201ENST00000371429 OC90Q02509 493 aaPredicted RBP14.47□□□□□ -0.09
NDC1-201ENST00000371429 C11orf88Q6PI97 169 aa14.47□□□□□ -0.09
NDC1-201ENST00000371429 KRT77Q7Z794 578 aa14.47□□□□□ -0.09
NDC1-201ENST00000371429 KBTBD6Q86V97 674 aa14.47□□□□□ -0.09
NDC1-201ENST00000371429 MS4A4AQ96JQ5 239 aa14.47□□□□□ -0.09
NDC1-201ENST00000371429 DCUN1D5Q9BTE7 237 aa14.47□□□□□ -0.09
NDC1-201ENST00000371429 USP29Q9HBJ7 922 aa14.47□□□□□ -0.09
NDC1-201ENST00000371429 CLCA3PQ9Y6N3 262 aa14.47□□□□□ -0.09
NDC1-201ENST00000371429 KRT36O76013 467 aa14.46□□□□□ -0.09
NDC1-201ENST00000371429 TCEA1P23193 301 aaKnown RBP14.46□□□□□ -0.09
NDC1-201ENST00000371429 ADSLP30566 484 aaPredicted RBP14.46□□□□□ -0.09
NDC1-201ENST00000371429 CSTF2P33240 577 aaKnown RBP eCLIP14.46□□□□□ -0.09
NDC1-201ENST00000371429 MAPK10P53779 464 aa14.46□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms