RNA–Protein interactions for RNA: ENST00000369984.4

HCFC1-202, Transcript of host cell factor C1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene HCFC1, Length 8,375 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC1-202ENST00000369984 SLC5A3P53794 718 aa12.29□□□□□ -0.44
HCFC1-202ENST00000369984 NDUFA9Q16795 377 aa12.29□□□□□ -0.44
HCFC1-202ENST00000369984 MED27Q6P2C8 311 aa12.29□□□□□ -0.44
HCFC1-202ENST00000369984 GAL3ST1Q99999 423 aa12.29□□□□□ -0.44
HCFC1-202ENST00000369984 RIC1Q4ADV7 1423 aa12.29□□□□□ -0.44
HCFC1-202ENST00000369984 TBX1O43435 398 aa12.28□□□□□ -0.44
HCFC1-202ENST00000369984 ATP6V1G1O75348 118 aa12.28□□□□□ -0.44
HCFC1-202ENST00000369984 RASGRP1O95267 797 aa12.28□□□□□ -0.44
HCFC1-202ENST00000369984 C1RP00736 705 aa12.28□□□□□ -0.44
HCFC1-202ENST00000369984 IL7RP16871 459 aa12.28□□□□□ -0.44
HCFC1-202ENST00000369984 MLLT6P55198 1093 aaPredicted RBP12.28□□□□□ -0.44
HCFC1-202ENST00000369984 TEAD4Q15561 434 aa12.28□□□□□ -0.44
HCFC1-202ENST00000369984 TEX44Q53QW1 395 aa12.28□□□□□ -0.44
HCFC1-202ENST00000369984 ZNF311Q5JNZ3 666 aa12.28□□□□□ -0.44
HCFC1-202ENST00000369984 OTOP3Q7RTS5 596 aa12.28□□□□□ -0.44
HCFC1-202ENST00000369984 GALNT15Q8N3T1 639 aa12.28□□□□□ -0.44
HCFC1-202ENST00000369984 SDR16C5Q8N3Y7 309 aa12.28□□□□□ -0.44
HCFC1-202ENST00000369984 ZNF347Q96SE7 839 aa12.28□□□□□ -0.44
HCFC1-202ENST00000369984 ANKRA2Q9H9E1 313 aa12.28□□□□□ -0.44
HCFC1-202ENST00000369984 COMMD3Q9UBI1 195 aa12.28□□□□□ -0.44
HCFC1-202ENST00000369984 ZNF451Q9Y4E5 1061 aa12.28□□□□□ -0.44
HCFC1-202ENST00000369984 C1orf167Q5SNV9 1468 aa12.28□□□□□ -0.44
HCFC1-202ENST00000369984 LRRC10BA6NIK2 292 aa12.28□□□□□ -0.44
HCFC1-202ENST00000369984 C2orf74A8MZ97 194 aa12.28□□□□□ -0.44
HCFC1-202ENST00000369984 MSI1O43347 362 aaKnown RBP12.28□□□□□ -0.44
HCFC1-202ENST00000369984 ADH1AP07327 375 aa12.28□□□□□ -0.44
HCFC1-202ENST00000369984 TIGD6Q17RP2 521 aa12.28□□□□□ -0.44
HCFC1-202ENST00000369984 CXCL17Q6UXB2 119 aa12.28□□□□□ -0.44
HCFC1-202ENST00000369984 CCDC107Q8WV48 283 aa12.28□□□□□ -0.44
HCFC1-202ENST00000369984 FBXW2Q9UKT8 454 aa12.28□□□□□ -0.44
HCFC1-202ENST00000369984 ZNF14P17017 642 aaPredicted RBP12.28□□□□□ -0.44
HCFC1-202ENST00000369984 PTPRAP18433 802 aa12.28□□□□□ -0.44
HCFC1-202ENST00000369984 EIF5AP63241 154 aaKnown RBP12.28□□□□□ -0.44
HCFC1-202ENST00000369984 DNASE1L3Q13609 305 aa12.28□□□□□ -0.44
HCFC1-202ENST00000369984 HERC3Q15034 1050 aa12.28□□□□□ -0.44
HCFC1-202ENST00000369984 LDB1Q86U70 411 aaPredicted RBP12.28□□□□□ -0.44
HCFC1-202ENST00000369984 PIWIL1Q96J94 861 aaKnown RBP12.28□□□□□ -0.44
HCFC1-202ENST00000369984 TMEM68Q96MH6 324 aa12.28□□□□□ -0.44
HCFC1-202ENST00000369984 NUDT4Q9NZJ9 180 aa12.28□□□□□ -0.44
HCFC1-202ENST00000369984 CLDN4O14493 209 aa12.28□□□□□ -0.44
HCFC1-202ENST00000369984 SPAM1P38567 509 aa12.28□□□□□ -0.44
HCFC1-202ENST00000369984 HSPA7P48741 367 aa12.28□□□□□ -0.44
HCFC1-202ENST00000369984 IDH3AP50213 366 aa12.28□□□□□ -0.44
HCFC1-202ENST00000369984 CNPY1Q3B7I2 92 aa12.28□□□□□ -0.44
HCFC1-202ENST00000369984 XKR4Q5GH76 650 aa12.28□□□□□ -0.44
HCFC1-202ENST00000369984 ARL13AQ5H913 290 aaPredicted RBP12.28□□□□□ -0.44
HCFC1-202ENST00000369984 SWT1Q5T5J6 900 aaKnown RBP12.28□□□□□ -0.44
HCFC1-202ENST00000369984 ZDHHC21Q8IVQ6 265 aa12.28□□□□□ -0.44
HCFC1-202ENST00000369984 ZNF781Q8N8C0 355 aa12.28□□□□□ -0.44
HCFC1-202ENST00000369984 DCBLD1Q8N8Z6 715 aa12.28□□□□□ -0.44
HCFC1-202ENST00000369984 BTN2A3PQ96KV6 586 aa12.28□□□□□ -0.44
HCFC1-202ENST00000369984 ZSWIM3Q96MP5 696 aa12.28□□□□□ -0.44
HCFC1-202ENST00000369984 WRAP53Q9BUR4 548 aaKnown RBP12.28□□□□□ -0.44
HCFC1-202ENST00000369984 ZNF823P16415 610 aa12.28□□□□□ -0.44
HCFC1-202ENST00000369984 TARDBPQ13148 414 aaKnown RBP eCLIP12.28□□□□□ -0.44
HCFC1-202ENST00000369984 SLC1A5Q15758 541 aa12.28□□□□□ -0.44
HCFC1-202ENST00000369984 ALG10Q5BKT4 473 aa12.28□□□□□ -0.44
HCFC1-202ENST00000369984 IRF2BP2Q7Z5L9 587 aa12.28□□□□□ -0.44
HCFC1-202ENST00000369984 ADGRG6Q86SQ4 1221 aa12.28□□□□□ -0.44
HCFC1-202ENST00000369984 ZNF227Q86WZ6 799 aa12.28□□□□□ -0.44
HCFC1-202ENST00000369984 SLC22A4Q9H015 551 aa12.28□□□□□ -0.44
HCFC1-202ENST00000369984 IPPKQ9H8X2 491 aa12.28□□□□□ -0.44
HCFC1-202ENST00000369984 PCDH18Q9HCL0 1135 aa12.28□□□□□ -0.44
HCFC1-202ENST00000369984 VWDEQ8N2E2 1590 aa12.28□□□□□ -0.44
HCFC1-202ENST00000369984 MROH2AA6NES4 1674 aa12.28□□□□□ -0.44
HCFC1-202ENST00000369984 WNT10BO00744 389 aa12.28□□□□□ -0.44
HCFC1-202ENST00000369984 PDPK1O15530 556 aa12.28□□□□□ -0.44
HCFC1-202ENST00000369984 FMO3P31513 532 aa12.28□□□□□ -0.44
HCFC1-202ENST00000369984 GRK6P43250 576 aa12.28□□□□□ -0.44
HCFC1-202ENST00000369984 SMAD3P84022 425 aaKnown RBP12.28□□□□□ -0.44
HCFC1-202ENST00000369984 MSANTD2Q6P1R3 559 aa12.28□□□□□ -0.44
HCFC1-202ENST00000369984 HSDL2Q6YN16 418 aa12.28□□□□□ -0.44
HCFC1-202ENST00000369984 FCGR1BQ92637 280 aa12.28□□□□□ -0.44
HCFC1-202ENST00000369984 TCEAL3Q969E4 200 aa12.28□□□□□ -0.44
HCFC1-202ENST00000369984 HIST1H2AAQ96QV6 131 aa12.28□□□□□ -0.44
HCFC1-202ENST00000369984 RRAGCQ9HB90 399 aa12.28□□□□□ -0.44
HCFC1-202ENST00000369984 RIMKLBQ9ULI2 386 aa12.28□□□□□ -0.44
HCFC1-202ENST00000369984 PADI2Q9Y2J8 665 aa12.28□□□□□ -0.44
HCFC1-202ENST00000369984 ICE1Q9Y2F5 2266 aa12.28□□□□□ -0.44
HCFC1-202ENST00000369984 E9PAM4 449 aa12.28□□□□□ -0.44
HCFC1-202ENST00000369984 L7N2F9 121 aa12.28□□□□□ -0.44
HCFC1-202ENST00000369984 SLC2A2P11168 524 aaPredicted RBP12.28□□□□□ -0.44
HCFC1-202ENST00000369984 HOXC8P31273 242 aa12.28□□□□□ -0.44
HCFC1-202ENST00000369984 VAMP2P63027 116 aa12.28□□□□□ -0.44
HCFC1-202ENST00000369984 CLCQ05315 142 aa12.28□□□□□ -0.44
HCFC1-202ENST00000369984 PLEKHG6Q3KR16 790 aa12.28□□□□□ -0.44
HCFC1-202ENST00000369984 FBXO48Q5FWF7 155 aa12.28□□□□□ -0.44
HCFC1-202ENST00000369984 MFSD5Q6N075 450 aa12.28□□□□□ -0.44
HCFC1-202ENST00000369984 GLOD4Q9HC38 313 aa12.28□□□□□ -0.44
HCFC1-202ENST00000369984 CNTNAP1P78357 1384 aa12.27□□□□□ -0.44
HCFC1-202ENST00000369984 CYP3A7-CYP3A51PA0A087WV96 503 aa12.27□□□□□ -0.44
HCFC1-202ENST00000369984 OR1F1O43749 312 aa12.27□□□□□ -0.44
HCFC1-202ENST00000369984 SCGB1D2O95969 90 aa12.27□□□□□ -0.44
HCFC1-202ENST00000369984 CYP3A7P24462 503 aa12.27□□□□□ -0.44
HCFC1-202ENST00000369984 CD83Q01151 205 aa12.27□□□□□ -0.44
HCFC1-202ENST00000369984 GHDCQ8N2G8 530 aa12.27□□□□□ -0.44
HCFC1-202ENST00000369984 NMUR1Q9HB89 426 aa12.27□□□□□ -0.44
HCFC1-202ENST00000369984 RAI2Q9Y5P3 530 aa12.27□□□□□ -0.44
HCFC1-202ENST00000369984 CPNE3O75131 537 aaKnown RBP12.27□□□□□ -0.44
HCFC1-202ENST00000369984 GADD45GO95257 159 aa12.27□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms