RNA–Protein interactions for RNA: ENST00000368690.7

CHTOP-203, Transcript of chromatin target of PRMT1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CHTOP, Length 2,165 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHTOP-203ENST00000368690 FAM172BPA6NC97 362 aa17.13■□□□□ 0.33
CHTOP-203ENST00000368690 PABPN1LA6NDY0 278 aaKnown RBP17.13■□□□□ 0.33
CHTOP-203ENST00000368690 M0QZ92 97 aa17.13■□□□□ 0.33
CHTOP-203ENST00000368690 IRAK2O43187 625 aa17.13■□□□□ 0.33
CHTOP-203ENST00000368690 XPNPEP2O43895 674 aa17.13■□□□□ 0.33
CHTOP-203ENST00000368690 ECI2O75521 394 aa17.13■□□□□ 0.33
CHTOP-203ENST00000368690 DARSP14868 501 aaKnown RBP17.13■□□□□ 0.33
CHTOP-203ENST00000368690 BMPR1AP36894 532 aa17.13■□□□□ 0.33
CHTOP-203ENST00000368690 NCS1P62166 190 aa17.13■□□□□ 0.33
CHTOP-203ENST00000368690 IL5RAQ01344 420 aa17.13■□□□□ 0.33
CHTOP-203ENST00000368690 VARS2Q5ST30 1063 aaKnown RBP17.13■□□□□ 0.33
CHTOP-203ENST00000368690 GPRIN3Q6ZVF9 776 aa17.13■□□□□ 0.33
CHTOP-203ENST00000368690 HS3ST5Q8IZT8 346 aa17.13■□□□□ 0.33
CHTOP-203ENST00000368690 CHCHD4Q8N4Q1 142 aa17.13■□□□□ 0.33
CHTOP-203ENST00000368690 FBXO30Q8TB52 745 aa17.13■□□□□ 0.33
CHTOP-203ENST00000368690 CNIH3Q8TBE1 160 aa17.13■□□□□ 0.33
CHTOP-203ENST00000368690 FIG4Q92562 907 aa17.13■□□□□ 0.33
CHTOP-203ENST00000368690 SH3GL1Q99961 368 aa17.13■□□□□ 0.33
CHTOP-203ENST00000368690 C17orf80Q9BSJ5 609 aa17.13■□□□□ 0.33
CHTOP-203ENST00000368690 NDEL1Q9GZM8 345 aa17.13■□□□□ 0.33
CHTOP-203ENST00000368690 TMEM30AQ9NV96 361 aa17.13■□□□□ 0.33
CHTOP-203ENST00000368690 NPAP1Q9NZP6 1156 aa17.13■□□□□ 0.33
CHTOP-203ENST00000368690 KLK14Q9P0G3 267 aa17.13■□□□□ 0.33
CHTOP-203ENST00000368690 ANKRD34BA5PLL1 514 aa17.12■□□□□ 0.33
CHTOP-203ENST00000368690 ANKRD28O15084 1053 aa17.12■□□□□ 0.33
CHTOP-203ENST00000368690 MMP2P08253 660 aa17.12■□□□□ 0.33
CHTOP-203ENST00000368690 CASP3P42574 277 aa17.12■□□□□ 0.33
CHTOP-203ENST00000368690 RAD51Q06609 339 aa17.12■□□□□ 0.33
CHTOP-203ENST00000368690 RAPSNQ13702 412 aa17.12■□□□□ 0.33
CHTOP-203ENST00000368690 TYSND1Q2T9J0 566 aa17.12■□□□□ 0.33
CHTOP-203ENST00000368690 NAT16Q8N8M0 369 aa17.12■□□□□ 0.33
CHTOP-203ENST00000368690 PNPLA1Q8N8W4 532 aa17.12■□□□□ 0.33
CHTOP-203ENST00000368690 KLHDC9Q8NEP7 349 aa17.12■□□□□ 0.33
CHTOP-203ENST00000368690 ZNF382Q96SR6 550 aa17.12■□□□□ 0.33
CHTOP-203ENST00000368690 ACOT13Q9NPJ3 140 aa17.12■□□□□ 0.33
CHTOP-203ENST00000368690 PIN4Q9Y237 131 aaKnown RBP17.12■□□□□ 0.33
CHTOP-203ENST00000368690 NOD1Q9Y239 953 aa17.12■□□□□ 0.33
CHTOP-203ENST00000368690 SCN10AQ9Y5Y9 1956 aa17.12■□□□□ 0.33
CHTOP-203ENST00000368690 THSD7BQ9C0I4 1608 aa17.12■□□□□ 0.33
CHTOP-203ENST00000368690 LOC285095A0A1B0GVY8 99 aa17.12■□□□□ 0.33
CHTOP-203ENST00000368690 OR51F1A6NGY5 319 aa17.12■□□□□ 0.33
CHTOP-203ENST00000368690 AGAP5A6NIR3 686 aa17.12■□□□□ 0.33
CHTOP-203ENST00000368690 PAGE1O75459 146 aa17.12■□□□□ 0.33
CHTOP-203ENST00000368690 KCNK2O95069 426 aa17.12■□□□□ 0.33
CHTOP-203ENST00000368690 KRT75O95678 551 aa17.12■□□□□ 0.33
CHTOP-203ENST00000368690 GOT2P00505 430 aaKnown RBP17.12■□□□□ 0.33
CHTOP-203ENST00000368690 POLR2EP19388 210 aaKnown RBP17.12■□□□□ 0.33
CHTOP-203ENST00000368690 CD86P42081 329 aa17.12■□□□□ 0.33
CHTOP-203ENST00000368690 NRIP1P48552 1158 aa17.12■□□□□ 0.33
CHTOP-203ENST00000368690 MASP1P48740 699 aa17.12■□□□□ 0.33
CHTOP-203ENST00000368690 RABGGTBP53611 331 aa17.12■□□□□ 0.33
CHTOP-203ENST00000368690 ZNF45Q02386 682 aa17.12■□□□□ 0.33
CHTOP-203ENST00000368690 SLC13A2Q13183 592 aa17.12■□□□□ 0.33
CHTOP-203ENST00000368690 ZNF404Q494X3 552 aa17.12■□□□□ 0.33
CHTOP-203ENST00000368690 SIRPB2Q5JXA9 342 aa17.12■□□□□ 0.33
CHTOP-203ENST00000368690 IL31Q6EBC2 164 aa17.12■□□□□ 0.33
CHTOP-203ENST00000368690 PNCKQ6P2M8 343 aa17.12■□□□□ 0.33
CHTOP-203ENST00000368690 Q6ZSR9 355 aa17.12■□□□□ 0.33
CHTOP-203ENST00000368690 GPR149Q86SP6 731 aa17.12■□□□□ 0.33
CHTOP-203ENST00000368690 FRS2Q8WU20 508 aa17.12■□□□□ 0.33
CHTOP-203ENST00000368690 ATL1Q8WXF7 558 aa17.12■□□□□ 0.33
CHTOP-203ENST00000368690 FUBP1Q96AE4 644 aaKnown RBP17.12■□□□□ 0.33
CHTOP-203ENST00000368690 ZHX1-C8orf76Q96EF9 292 aa17.12■□□□□ 0.33
CHTOP-203ENST00000368690 TBATAQ96M53 351 aa17.12■□□□□ 0.33
CHTOP-203ENST00000368690 OR2B2Q9GZK3 357 aa17.12■□□□□ 0.33
CHTOP-203ENST00000368690 ACTL8Q9H568 366 aa17.12■□□□□ 0.33
CHTOP-203ENST00000368690 NEK6Q9HC98 313 aa17.12■□□□□ 0.33
CHTOP-203ENST00000368690 DCAF13Q9NV06 445 aaKnown RBP17.12■□□□□ 0.33
CHTOP-203ENST00000368690 CDH9Q9ULB4 789 aa17.12■□□□□ 0.33
CHTOP-203ENST00000368690 ELOVL7A1L3X0 281 aa17.11■□□□□ 0.33
CHTOP-203ENST00000368690 RGS10O43665 173 aa17.11■□□□□ 0.33
CHTOP-203ENST00000368690 RPP40O75818 363 aaKnown RBP17.11■□□□□ 0.33
CHTOP-203ENST00000368690 PSMB9P28065 219 aa17.11■□□□□ 0.33
CHTOP-203ENST00000368690 ALDH4A1P30038 563 aa17.11■□□□□ 0.33
CHTOP-203ENST00000368690 PRDX3P30048 256 aaKnown RBP17.11■□□□□ 0.33
CHTOP-203ENST00000368690 HOXC8P31273 242 aa17.11■□□□□ 0.33
CHTOP-203ENST00000368690 CCR1P32246 355 aa17.11■□□□□ 0.33
CHTOP-203ENST00000368690 MAP2K4P45985 399 aa17.11■□□□□ 0.33
CHTOP-203ENST00000368690 STC1P52823 247 aa17.11■□□□□ 0.33
CHTOP-203ENST00000368690 LSM3P62310 102 aaKnown RBP17.11■□□□□ 0.33
CHTOP-203ENST00000368690 CAMK2BQ13554 666 aa17.11■□□□□ 0.33
CHTOP-203ENST00000368690 STEAP3Q658P3 488 aa17.11■□□□□ 0.33
CHTOP-203ENST00000368690 SHQ1Q6PI26 577 aaKnown RBP17.11■□□□□ 0.33
CHTOP-203ENST00000368690 CYP20A1Q6UW02 462 aa17.11■□□□□ 0.33
CHTOP-203ENST00000368690 POC5Q8NA72 575 aa17.11■□□□□ 0.33
CHTOP-203ENST00000368690 CAPSLQ8WWF8 208 aa17.11■□□□□ 0.33
CHTOP-203ENST00000368690 IPCEF1Q8WWN9 437 aaPredicted RBP17.11■□□□□ 0.33
CHTOP-203ENST00000368690 FCGR1BQ92637 280 aa17.11■□□□□ 0.33
CHTOP-203ENST00000368690 FCRL2Q96LA5 508 aaPredicted RBP17.11■□□□□ 0.33
CHTOP-203ENST00000368690 TP63Q9H3D4 680 aaPredicted RBP17.11■□□□□ 0.33
CHTOP-203ENST00000368690 ABCB10Q9NRK6 738 aa17.11■□□□□ 0.33
CHTOP-203ENST00000368690 NDFIP2Q9NV92 336 aa17.11■□□□□ 0.33
CHTOP-203ENST00000368690 TAS2R13Q9NYV9 303 aa17.11■□□□□ 0.33
CHTOP-203ENST00000368690 SLCO3A1Q9UIG8 710 aa17.11■□□□□ 0.33
CHTOP-203ENST00000368690 MYBPHLA2RUH7 354 aa17.11■□□□□ 0.33
CHTOP-203ENST00000368690 METTL15A6NJ78 407 aa17.11■□□□□ 0.33
CHTOP-203ENST00000368690 CXCR6O00574 342 aa17.11■□□□□ 0.33
CHTOP-203ENST00000368690 ATXN1LP0C7T5 689 aaKnown RBP17.11■□□□□ 0.33
CHTOP-203ENST00000368690 TGFBR2P37173 567 aa17.11■□□□□ 0.33
CHTOP-203ENST00000368690 ACLYP53396 1101 aa17.11■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms