RNA–Protein interactions for RNA: ENST00000368545.7

TPM3-213, Transcript of tropomyosin 3, humanhuman

TSL 1 (best)

Gene TPM3, Length 2,147 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-213ENST00000368545 CD151P48509 253 aa8.66□□□□□ -1.02
TPM3-213ENST00000368545 ZNF140P52738 457 aaPredicted RBP8.66□□□□□ -1.02
TPM3-213ENST00000368545 PPARDQ03181 441 aa8.66□□□□□ -1.02
TPM3-213ENST00000368545 RAD51Q06609 339 aa8.66□□□□□ -1.02
TPM3-213ENST00000368545 PDGFRLQ15198 375 aa8.66□□□□□ -1.02
TPM3-213ENST00000368545 CNN3Q15417 329 aaKnown RBP8.66□□□□□ -1.02
TPM3-213ENST00000368545 SMAD1Q15797 465 aaKnown RBP8.66□□□□□ -1.02
TPM3-213ENST00000368545 PDK4Q16654 411 aa8.66□□□□□ -1.02
TPM3-213ENST00000368545 KYAT3Q6YP21 454 aaKnown RBP8.66□□□□□ -1.02
TPM3-213ENST00000368545 ZNF771Q7L3S4 317 aaPredicted RBP8.66□□□□□ -1.02
TPM3-213ENST00000368545 GPR155Q7Z3F1 870 aa8.66□□□□□ -1.02
TPM3-213ENST00000368545 LCA5Q86VQ0 697 aa8.66□□□□□ -1.02
TPM3-213ENST00000368545 TSPYL5Q86VY4 417 aaPredicted RBP8.66□□□□□ -1.02
TPM3-213ENST00000368545 PDCD6IPQ8WUM4 868 aaKnown RBP8.66□□□□□ -1.02
TPM3-213ENST00000368545 KIAA1191Q96A73 305 aa8.66□□□□□ -1.02
TPM3-213ENST00000368545 NSMCE3Q96MG7 304 aa8.66□□□□□ -1.02
TPM3-213ENST00000368545 ZNF317Q96PQ6 595 aaPredicted RBP8.66□□□□□ -1.02
TPM3-213ENST00000368545 PAIP2Q9BPZ3 127 aaKnown RBP8.66□□□□□ -1.02
TPM3-213ENST00000368545 VPS11Q9H270 941 aa8.66□□□□□ -1.02
TPM3-213ENST00000368545 MLXIPLQ9NP71 852 aa8.66□□□□□ -1.02
TPM3-213ENST00000368545 SNX15Q9NRS6 342 aa8.66□□□□□ -1.02
TPM3-213ENST00000368545 NLE1Q9NVX2 485 aaPredicted RBP8.66□□□□□ -1.02
TPM3-213ENST00000368545 GPRC5BQ9NZH0 403 aa8.66□□□□□ -1.02
TPM3-213ENST00000368545 ADGRE2Q9UHX3 823 aa8.66□□□□□ -1.02
TPM3-213ENST00000368545 FBXO5Q9UKT4 447 aa8.66□□□□□ -1.02
TPM3-213ENST00000368545 GRID1Q9ULK0 1009 aa8.66□□□□□ -1.02
TPM3-213ENST00000368545 CORO1CQ9ULV4 474 aaPredicted RBP8.66□□□□□ -1.02
TPM3-213ENST00000368545 SLC8A2Q9UPR5 921 aa8.66□□□□□ -1.02
TPM3-213ENST00000368545 PLLPQ9Y342 182 aa8.66□□□□□ -1.02
TPM3-213ENST00000368545 ARL5AQ9Y689 179 aa8.66□□□□□ -1.02
TPM3-213ENST00000368545 NUMBLQ9Y6R0 609 aa8.66□□□□□ -1.02
TPM3-213ENST00000368545 DOCK8Q8NF50 2099 aa8.66□□□□□ -1.02
TPM3-213ENST00000368545 CEP250Q9BV73 2442 aa8.66□□□□□ -1.02
TPM3-213ENST00000368545 HEPACAM2A8MVW5 462 aa8.66□□□□□ -1.02
TPM3-213ENST00000368545 GOLGA8TH3BQL2 631 aa8.66□□□□□ -1.02
TPM3-213ENST00000368545 ATP5BP06576 529 aaKnown RBP8.66□□□□□ -1.02
TPM3-213ENST00000368545 SRPRAP08240 638 aaKnown RBP8.66□□□□□ -1.02
TPM3-213ENST00000368545 PDHA1P08559 390 aa8.66□□□□□ -1.02
TPM3-213ENST00000368545 OGNP20774 298 aaKnown RBP8.66□□□□□ -1.02
TPM3-213ENST00000368545 MAP4P27816 1152 aaKnown RBP8.66□□□□□ -1.02
TPM3-213ENST00000368545 NNMTP40261 264 aa8.66□□□□□ -1.02
TPM3-213ENST00000368545 ETV4P43268 484 aa8.66□□□□□ -1.02
TPM3-213ENST00000368545 AGFG1P52594 562 aaKnown RBP8.66□□□□□ -1.02
TPM3-213ENST00000368545 SEC24CP53992 1094 aa8.66□□□□□ -1.02
TPM3-213ENST00000368545 BTKQ06187 659 aa8.66□□□□□ -1.02
TPM3-213ENST00000368545 MRNIPQ6NTE8 343 aa8.66□□□□□ -1.02
TPM3-213ENST00000368545 AFTPHQ6ULP2 937 aa8.66□□□□□ -1.02
TPM3-213ENST00000368545 Q6ZS46 218 aa8.66□□□□□ -1.02
TPM3-213ENST00000368545 CPLX4Q7Z7G2 160 aa8.66□□□□□ -1.02
TPM3-213ENST00000368545 ADIPOR2Q86V24 386 aa8.66□□□□□ -1.02
TPM3-213ENST00000368545 CILP2Q8IUL8 1156 aa8.66□□□□□ -1.02
TPM3-213ENST00000368545 Q8N1Y9 231 aa8.66□□□□□ -1.02
TPM3-213ENST00000368545 OTUD6BQ8N6M0 293 aa8.66□□□□□ -1.02
TPM3-213ENST00000368545 NAT16Q8N8M0 369 aa8.66□□□□□ -1.02
TPM3-213ENST00000368545 GPR150Q8NGU9 434 aa8.66□□□□□ -1.02
TPM3-213ENST00000368545 HDAC10Q969S8 669 aa8.66□□□□□ -1.02
TPM3-213ENST00000368545 MPP4Q96JB8 637 aa8.66□□□□□ -1.02
TPM3-213ENST00000368545 DNAJC1Q96KC8 554 aaKnown RBP8.66□□□□□ -1.02
TPM3-213ENST00000368545 RPL10LQ96L21 214 aaKnown RBP8.66□□□□□ -1.02
TPM3-213ENST00000368545 FAM111AQ96PZ2 611 aa8.66□□□□□ -1.02
TPM3-213ENST00000368545 CCT8L2Q96SF2 557 aa8.66□□□□□ -1.02
TPM3-213ENST00000368545 CPEB1Q9BZB8 566 aaKnown RBP8.66□□□□□ -1.02
TPM3-213ENST00000368545 MAGEE1Q9HCI5 957 aa8.66□□□□□ -1.02
TPM3-213ENST00000368545 ZFP14Q9HCL3 533 aa8.66□□□□□ -1.02
TPM3-213ENST00000368545 DMRT3Q9NQL9 472 aa8.66□□□□□ -1.02
TPM3-213ENST00000368545 GULP1Q9UBP9 304 aa8.66□□□□□ -1.02
TPM3-213ENST00000368545 DCDC2Q9UHG0 476 aa8.66□□□□□ -1.02
TPM3-213ENST00000368545 EVLQ9UI08 416 aaPredicted RBP8.66□□□□□ -1.02
TPM3-213ENST00000368545 SLC27A6Q9Y2P4 619 aa8.66□□□□□ -1.02
TPM3-213ENST00000368545 BPTFQ12830 3046 aa8.66□□□□□ -1.02
TPM3-213ENST00000368545 TMEM82A0PJX8 343 aa8.65□□□□□ -1.02
TPM3-213ENST00000368545 H7C0S8 307 aa8.65□□□□□ -1.02
TPM3-213ENST00000368545 TRAFD1O14545 582 aaPredicted RBP8.65□□□□□ -1.02
TPM3-213ENST00000368545 NPHS1O60500 1241 aa8.65□□□□□ -1.02
TPM3-213ENST00000368545 ZNF821O75541 412 aaPredicted RBP8.65□□□□□ -1.02
TPM3-213ENST00000368545 AHSGP02765 367 aa8.65□□□□□ -1.02
TPM3-213ENST00000368545 PRKCGP05129 697 aa8.65□□□□□ -1.02
TPM3-213ENST00000368545 CELA2BP08218 269 aaPredicted RBP8.65□□□□□ -1.02
TPM3-213ENST00000368545 VIMP08670 466 aaKnown RBP8.65□□□□□ -1.02
TPM3-213ENST00000368545 DHRS4L1P0CG22 281 aa8.65□□□□□ -1.02
TPM3-213ENST00000368545 VIPR2P41587 438 aa8.65□□□□□ -1.02
TPM3-213ENST00000368545 LEPRP48357 1165 aaKnown RBP8.65□□□□□ -1.02
TPM3-213ENST00000368545 STK19P49842 368 aaPredicted RBP8.65□□□□□ -1.02
TPM3-213ENST00000368545 MTAPQ13126 283 aa8.65□□□□□ -1.02
TPM3-213ENST00000368545 CTBP1Q13363 440 aa8.65□□□□□ -1.02
TPM3-213ENST00000368545 PDE1CQ14123 709 aaPredicted RBP8.65□□□□□ -1.02
TPM3-213ENST00000368545 COL28A1Q2UY09 1125 aa8.65□□□□□ -1.02
TPM3-213ENST00000368545 TAF1BQ53T94 588 aaPredicted RBP8.65□□□□□ -1.02
TPM3-213ENST00000368545 CATSPEREQ5SY80 951 aa8.65□□□□□ -1.02
TPM3-213ENST00000368545 LYPD4Q6UWN0 246 aa8.65□□□□□ -1.02
TPM3-213ENST00000368545 TPRG1Q6ZUI0 275 aa8.65□□□□□ -1.02
TPM3-213ENST00000368545 CCDC91Q7Z6B0 441 aa8.65□□□□□ -1.02
TPM3-213ENST00000368545 DENND6AQ8IWF6 608 aa8.65□□□□□ -1.02
TPM3-213ENST00000368545 TMEM52Q8NDY8 209 aa8.65□□□□□ -1.02
TPM3-213ENST00000368545 MDGA1Q8NFP4 955 aa8.65□□□□□ -1.02
TPM3-213ENST00000368545 LRRC8CQ8TDW0 803 aa8.65□□□□□ -1.02
TPM3-213ENST00000368545 ZNF473Q8WTR7 871 aaKnown RBP8.65□□□□□ -1.02
TPM3-213ENST00000368545 RSPRY1Q96DX4 576 aa8.65□□□□□ -1.02
TPM3-213ENST00000368545 ZNF641Q96N77 438 aaPredicted RBP8.65□□□□□ -1.02
TPM3-213ENST00000368545 LRRC3BQ96PB8 259 aa8.65□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms