RNA–Protein interactions for RNA: ENST00000368440.4

SMPDL3A-201, Transcript of sphingomyelin phosphodiesterase acid like 3A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMPDL3A, Length 1,851 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPDL3A-201ENST00000368440 EIF3HO15372 352 aaKnown RBP eCLIP14.7□□□□□ -0.06
SMPDL3A-201ENST00000368440 DUX1O43812 170 aa14.7□□□□□ -0.06
SMPDL3A-201ENST00000368440 TUBBP07437 444 aa14.7□□□□□ -0.06
SMPDL3A-201ENST00000368440 C1QTNF9P0C862 333 aa14.7□□□□□ -0.06
SMPDL3A-201ENST00000368440 ACADLP28330 430 aa14.7□□□□□ -0.06
SMPDL3A-201ENST00000368440 CD151P48509 253 aa14.7□□□□□ -0.06
SMPDL3A-201ENST00000368440 INHBCP55103 352 aa14.7□□□□□ -0.06
SMPDL3A-201ENST00000368440 ZFP36L1Q07352 338 aaKnown RBP14.7□□□□□ -0.06
SMPDL3A-201ENST00000368440 SQSTM1Q13501 440 aa14.7□□□□□ -0.06
SMPDL3A-201ENST00000368440 TEDDM1Q5T9Z0 273 aa14.7□□□□□ -0.06
SMPDL3A-201ENST00000368440 RBM12BQ8IXT5 1001 aaKnown RBP14.7□□□□□ -0.06
SMPDL3A-201ENST00000368440 SLC22A15Q8IZD6 547 aa14.7□□□□□ -0.06
SMPDL3A-201ENST00000368440 GSDMBQ8TAX9 411 aa14.7□□□□□ -0.06
SMPDL3A-201ENST00000368440 PYROXD1Q8WU10 500 aa14.7□□□□□ -0.06
SMPDL3A-201ENST00000368440 NCSTNQ92542 709 aa14.7□□□□□ -0.06
SMPDL3A-201ENST00000368440 TFGQ92734 400 aaPredicted RBP14.7□□□□□ -0.06
SMPDL3A-201ENST00000368440 TMEM159Q96B96 161 aa14.7□□□□□ -0.06
SMPDL3A-201ENST00000368440 PANX3Q96QZ0 392 aa14.7□□□□□ -0.06
SMPDL3A-201ENST00000368440 FERD3LQ96RJ6 166 aa14.7□□□□□ -0.06
SMPDL3A-201ENST00000368440 SLC30A3Q99726 388 aa14.7□□□□□ -0.06
SMPDL3A-201ENST00000368440 ZMYND15Q9H091 742 aa14.7□□□□□ -0.06
SMPDL3A-201ENST00000368440 SLC24A2Q9UI40 661 aa14.7□□□□□ -0.06
SMPDL3A-201ENST00000368440 VPS9D1Q9Y2B5 631 aa14.7□□□□□ -0.06
SMPDL3A-201ENST00000368440 IGHV5-10-1A0A0J9YXX1 117 aa14.69□□□□□ -0.06
SMPDL3A-201ENST00000368440 ZW10O43264 779 aa14.69□□□□□ -0.06
SMPDL3A-201ENST00000368440 PIAS1O75925 651 aa14.69□□□□□ -0.06
SMPDL3A-201ENST00000368440 UBXN7O94888 489 aa14.69□□□□□ -0.06
SMPDL3A-201ENST00000368440 PROS1P07225 676 aa14.69□□□□□ -0.06
SMPDL3A-201ENST00000368440 SSTR1P30872 391 aa14.69□□□□□ -0.06
SMPDL3A-201ENST00000368440 LEPRP48357 1165 aaKnown RBP14.69□□□□□ -0.06
SMPDL3A-201ENST00000368440 GFERP55789 205 aa14.69□□□□□ -0.06
SMPDL3A-201ENST00000368440 ZNF449Q6P9G9 518 aa14.69□□□□□ -0.06
SMPDL3A-201ENST00000368440 OR5AR1Q8NGP9 310 aa14.69□□□□□ -0.06
SMPDL3A-201ENST00000368440 ASZ1Q8WWH4 475 aa14.69□□□□□ -0.06
SMPDL3A-201ENST00000368440 C9orf72Q96LT7 481 aa14.69□□□□□ -0.06
SMPDL3A-201ENST00000368440 CCDC74BQ96LY2 380 aa14.69□□□□□ -0.06
SMPDL3A-201ENST00000368440 KIR3DX1Q9H7L2 352 aa14.69□□□□□ -0.06
SMPDL3A-201ENST00000368440 SMYD2Q9NRG4 433 aa14.69□□□□□ -0.06
SMPDL3A-201ENST00000368440 TSR3Q9UJK0 312 aaKnown RBP14.69□□□□□ -0.06
SMPDL3A-201ENST00000368440 AHSGP02765 367 aa14.69□□□□□ -0.06
SMPDL3A-201ENST00000368440 APOA4P06727 396 aa14.69□□□□□ -0.06
SMPDL3A-201ENST00000368440 CHRM3P20309 590 aa14.69□□□□□ -0.06
SMPDL3A-201ENST00000368440 CCKBRP32239 447 aa14.69□□□□□ -0.06
SMPDL3A-201ENST00000368440 PPP1CAP62136 330 aa14.69□□□□□ -0.06
SMPDL3A-201ENST00000368440 PRKG2Q13237 762 aa14.69□□□□□ -0.06
SMPDL3A-201ENST00000368440 FRG1Q14331 258 aaKnown RBP14.69□□□□□ -0.06
SMPDL3A-201ENST00000368440 PLCL1Q15111 1095 aa14.69□□□□□ -0.06
SMPDL3A-201ENST00000368440 C3orf38Q5JPI3 329 aa14.69□□□□□ -0.06
SMPDL3A-201ENST00000368440 BEND6Q5SZJ8 279 aaPredicted RBP14.69□□□□□ -0.06
SMPDL3A-201ENST00000368440 RBM20Q5T481 1227 aaKnown RBP14.69□□□□□ -0.06
SMPDL3A-201ENST00000368440 PHF19Q5T6S3 580 aa14.69□□□□□ -0.06
SMPDL3A-201ENST00000368440 OTOAQ7RTW8 1153 aa14.69□□□□□ -0.06
SMPDL3A-201ENST00000368440 RCBTB1Q8NDN9 531 aa14.69□□□□□ -0.06
SMPDL3A-201ENST00000368440 GIMAP7Q8NHV1 300 aa14.69□□□□□ -0.06
SMPDL3A-201ENST00000368440 NDNQ99608 321 aa14.69□□□□□ -0.06
SMPDL3A-201ENST00000368440 HGH1Q9BTY7 390 aa14.69□□□□□ -0.06
SMPDL3A-201ENST00000368440 PHACTR1Q9C0D0 580 aa14.69□□□□□ -0.06
SMPDL3A-201ENST00000368440 FAM114A2Q9NRY5 505 aa14.69□□□□□ -0.06
SMPDL3A-201ENST00000368440 MOCS1Q9NZB8 636 aa14.69□□□□□ -0.06
SMPDL3A-201ENST00000368440 RUVBL2Q9Y230 463 aaKnown RBP14.69□□□□□ -0.06
SMPDL3A-201ENST00000368440 HEBP2Q9Y5Z4 205 aa14.69□□□□□ -0.06
SMPDL3A-201ENST00000368440 PSAT1Q9Y617 370 aa14.69□□□□□ -0.06
SMPDL3A-201ENST00000368440 ADAMTS20P59510 1910 aa14.69□□□□□ -0.06
SMPDL3A-201ENST00000368440 H3BMM5 538 aa14.68□□□□□ -0.06
SMPDL3A-201ENST00000368440 SLCO2B1O94956 709 aa14.68□□□□□ -0.06
SMPDL3A-201ENST00000368440 MPOP05164 745 aa14.68□□□□□ -0.06
SMPDL3A-201ENST00000368440 ECHS1P30084 290 aa14.68□□□□□ -0.06
SMPDL3A-201ENST00000368440 CLCN7P51798 805 aa14.68□□□□□ -0.06
SMPDL3A-201ENST00000368440 LIMK2P53671 638 aa14.68□□□□□ -0.06
SMPDL3A-201ENST00000368440 GPX6P59796 221 aa14.68□□□□□ -0.06
SMPDL3A-201ENST00000368440 MGAT5Q09328 741 aa14.68□□□□□ -0.06
SMPDL3A-201ENST00000368440 KRT33BQ14525 404 aa14.68□□□□□ -0.06
SMPDL3A-201ENST00000368440 C16orf72Q14CZ0 275 aa14.68□□□□□ -0.06
SMPDL3A-201ENST00000368440 TMED2Q15363 201 aa14.68□□□□□ -0.06
SMPDL3A-201ENST00000368440 TMEM71Q6P5X7 295 aa14.68□□□□□ -0.06
SMPDL3A-201ENST00000368440 UNQ6494/PRO21346Q6UXR6 183 aa14.68□□□□□ -0.06
SMPDL3A-201ENST00000368440 SIDT2Q8NBJ9 832 aaKnown RBP14.68□□□□□ -0.06
SMPDL3A-201ENST00000368440 OR4D9Q8NGE8 314 aa14.68□□□□□ -0.06
SMPDL3A-201ENST00000368440 MDM1Q8TC05 714 aa14.68□□□□□ -0.06
SMPDL3A-201ENST00000368440 TMEM74Q96NL1 305 aa14.68□□□□□ -0.06
SMPDL3A-201ENST00000368440 AARSD1Q9BTE6 412 aaKnown RBP14.68□□□□□ -0.06
SMPDL3A-201ENST00000368440 KLHL3Q9UH77 587 aa14.68□□□□□ -0.06
SMPDL3A-201ENST00000368440 SATB2Q9UPW6 733 aa14.68□□□□□ -0.06
SMPDL3A-201ENST00000368440 ASF1AQ9Y294 204 aa14.68□□□□□ -0.06
SMPDL3A-201ENST00000368440 COLEC10Q9Y6Z7 277 aa14.68□□□□□ -0.06
SMPDL3A-201ENST00000368440 FREM2Q5SZK8 3169 aa14.68□□□□□ -0.06
SMPDL3A-201ENST00000368440 E5RI56 91 aa14.67□□□□□ -0.06
SMPDL3A-201ENST00000368440 FAM153BP0C7A2 387 aa14.67□□□□□ -0.06
SMPDL3A-201ENST00000368440 TPBGLP0DKB5 382 aa14.67□□□□□ -0.06
SMPDL3A-201ENST00000368440 THRAP10827 490 aa14.67□□□□□ -0.06
SMPDL3A-201ENST00000368440 HGFP14210 728 aa14.67□□□□□ -0.06
SMPDL3A-201ENST00000368440 AMD1P17707 334 aa14.67□□□□□ -0.06
SMPDL3A-201ENST00000368440 MAGEA4P43358 317 aa14.67□□□□□ -0.06
SMPDL3A-201ENST00000368440 CAPZBP47756 277 aa14.67□□□□□ -0.06
SMPDL3A-201ENST00000368440 TIAL1Q01085 375 aaKnown RBP eCLIP14.67□□□□□ -0.06
SMPDL3A-201ENST00000368440 PLOD1Q02809 727 aaPredicted RBP14.67□□□□□ -0.06
SMPDL3A-201ENST00000368440 ABRQ12979 859 aa14.67□□□□□ -0.06
SMPDL3A-201ENST00000368440 GBX1Q14549 363 aa14.67□□□□□ -0.06
SMPDL3A-201ENST00000368440 CLPPQ16740 277 aaPredicted RBP14.67□□□□□ -0.06
SMPDL3A-201ENST00000368440 FAM153CQ494X1 144 aa14.67□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms