RNA–Protein interactions for RNA: ENST00000367002.4

RD3-201, Transcript of retinal degeneration 3, GUCY2D regulator, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RD3, Length 4,266 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RD3-201ENST00000367002 CYS1Q717R9 158 aa11.29□□□□□ -0.6
RD3-201ENST00000367002 CHPFQ8IZ52 775 aa11.29□□□□□ -0.6
RD3-201ENST00000367002 OR5K1Q8NHB7 308 aa11.29□□□□□ -0.6
RD3-201ENST00000367002 SUSD3Q96L08 255 aa11.29□□□□□ -0.6
RD3-201ENST00000367002 GPATCH1Q9BRR8 931 aaKnown RBP11.29□□□□□ -0.6
RD3-201ENST00000367002 MRPL39Q9NYK5 338 aaKnown RBP11.29□□□□□ -0.6
RD3-201ENST00000367002 GULP1Q9UBP9 304 aa11.29□□□□□ -0.6
RD3-201ENST00000367002 RUVBL1Q9Y265 456 aaKnown RBP11.29□□□□□ -0.6
RD3-201ENST00000367002 CHD2O14647 1828 aaKnown RBP11.28□□□□□ -0.6
RD3-201ENST00000367002 A0A1W2PQ67 120 aa11.28□□□□□ -0.6
RD3-201ENST00000367002 CARNS1A5YM72 827 aa11.28□□□□□ -0.6
RD3-201ENST00000367002 BHMG1C9JSJ3 638 aaPredicted RBP11.28□□□□□ -0.6
RD3-201ENST00000367002 SDHDO14521 159 aa11.28□□□□□ -0.6
RD3-201ENST00000367002 F2P00734 622 aa11.28□□□□□ -0.6
RD3-201ENST00000367002 T-ENOLP0DO92 83 aa11.28□□□□□ -0.6
RD3-201ENST00000367002 CDH1P12830 882 aa11.28□□□□□ -0.6
RD3-201ENST00000367002 DNAJB1P25685 340 aa11.28□□□□□ -0.6
RD3-201ENST00000367002 MADCAM1Q13477 382 aa11.28□□□□□ -0.6
RD3-201ENST00000367002 SYT16Q17RD7 645 aa11.28□□□□□ -0.6
RD3-201ENST00000367002 ADGRF1Q5T601 910 aa11.28□□□□□ -0.6
RD3-201ENST00000367002 AKAP14Q86UN6 197 aa11.28□□□□□ -0.6
RD3-201ENST00000367002 AP3S1Q92572 193 aa11.28□□□□□ -0.6
RD3-201ENST00000367002 AIF1LQ9BQI0 150 aa11.28□□□□□ -0.6
RD3-201ENST00000367002 SLITRK2Q9H156 845 aa11.28□□□□□ -0.6
RD3-201ENST00000367002 MKS1Q9NXB0 559 aa11.28□□□□□ -0.6
RD3-201ENST00000367002 ZIM2Q9NZV7 527 aa11.28□□□□□ -0.6
RD3-201ENST00000367002 LCHNA4D1U4 455 aa11.28□□□□□ -0.6
RD3-201ENST00000367002 VARSP26640 1264 aaKnown RBP11.28□□□□□ -0.6
RD3-201ENST00000367002 GDF5P43026 501 aa11.28□□□□□ -0.6
RD3-201ENST00000367002 RFTN1Q14699 578 aaPredicted RBP11.28□□□□□ -0.6
RD3-201ENST00000367002 SNAPC1Q16533 368 aa11.28□□□□□ -0.6
RD3-201ENST00000367002 LRRC73Q5JTD7 316 aa11.28□□□□□ -0.6
RD3-201ENST00000367002 MED27Q6P2C8 311 aa11.28□□□□□ -0.6
RD3-201ENST00000367002 XKR5Q6UX68 686 aa11.28□□□□□ -0.6
RD3-201ENST00000367002 EEF1AKMT1Q8WVE0 214 aa11.28□□□□□ -0.6
RD3-201ENST00000367002 ZNF599Q96NL3 588 aa11.28□□□□□ -0.6
RD3-201ENST00000367002 ADAMTS6Q9UKP5 1117 aa11.28□□□□□ -0.6
RD3-201ENST00000367002 MYH7BA7E2Y1 1941 aa11.28□□□□□ -0.6
RD3-201ENST00000367002 FAM240BA0A1B0GVZ2 78 aa11.28□□□□□ -0.6
RD3-201ENST00000367002 ANKRD66B4E2M5 251 aa11.28□□□□□ -0.6
RD3-201ENST00000367002 BEST1O76090 585 aa11.28□□□□□ -0.6
RD3-201ENST00000367002 LINGO3P0C6S8 592 aa11.28□□□□□ -0.6
RD3-201ENST00000367002 CCT3P49368 545 aaKnown RBP11.28□□□□□ -0.6
RD3-201ENST00000367002 EIF2B5Q13144 721 aaKnown RBP11.28□□□□□ -0.6
RD3-201ENST00000367002 CEACAM7Q14002 265 aa11.28□□□□□ -0.6
RD3-201ENST00000367002 PDE12Q6L8Q7 609 aaKnown RBP11.28□□□□□ -0.6
RD3-201ENST00000367002 FAM131AQ6UXB0 335 aa11.28□□□□□ -0.6
RD3-201ENST00000367002 COLGALT2Q8IYK4 626 aa11.28□□□□□ -0.6
RD3-201ENST00000367002 C2CD4AQ8NCU7 369 aaPredicted RBP11.28□□□□□ -0.6
RD3-201ENST00000367002 KIAA1191Q96A73 305 aa11.28□□□□□ -0.6
RD3-201ENST00000367002 FAM210AQ96ND0 272 aa11.28□□□□□ -0.6
RD3-201ENST00000367002 OXCT2Q9BYC2 517 aaPredicted RBP11.28□□□□□ -0.6
RD3-201ENST00000367002 ABCB9Q9NP78 766 aa11.28□□□□□ -0.6
RD3-201ENST00000367002 EQTNQ9NQ60 294 aa11.28□□□□□ -0.6
RD3-201ENST00000367002 PDLIM7Q9NR12 457 aa11.28□□□□□ -0.6
RD3-201ENST00000367002 AASDHPPTQ9NRN7 309 aa11.28□□□□□ -0.6
RD3-201ENST00000367002 FNIP2Q9P278 1114 aa11.28□□□□□ -0.6
RD3-201ENST00000367002 GPSM3Q9Y4H4 160 aa11.28□□□□□ -0.6
RD3-201ENST00000367002 PER2O15055 1255 aa11.27□□□□□ -0.6
RD3-201ENST00000367002 PLOD3O60568 738 aa11.27□□□□□ -0.6
RD3-201ENST00000367002 GLUD1P00367 558 aa11.27□□□□□ -0.6
RD3-201ENST00000367002 ALPIP09923 528 aa11.27□□□□□ -0.6
RD3-201ENST00000367002 PCSK2P16519 638 aa11.27□□□□□ -0.6
RD3-201ENST00000367002 STC1P52823 247 aa11.27□□□□□ -0.6
RD3-201ENST00000367002 TAS2R41P59536 307 aa11.27□□□□□ -0.6
RD3-201ENST00000367002 ZBTB6Q15916 424 aa11.27□□□□□ -0.6
RD3-201ENST00000367002 LYSMD3Q7Z3D4 306 aa11.27□□□□□ -0.6
RD3-201ENST00000367002 SNX20Q7Z614 316 aa11.27□□□□□ -0.6
RD3-201ENST00000367002 ADGRG6Q86SQ4 1221 aa11.27□□□□□ -0.6
RD3-201ENST00000367002 TP53INP2Q8IXH6 220 aa11.27□□□□□ -0.6
RD3-201ENST00000367002 OR8D1Q8WZ84 308 aa11.27□□□□□ -0.6
RD3-201ENST00000367002 EXOSC8Q96B26 276 aaKnown RBP11.27□□□□□ -0.6
RD3-201ENST00000367002 CXorf40BQ96DE9 158 aa11.27□□□□□ -0.6
RD3-201ENST00000367002 PRDM8Q9NQV8 689 aa11.27□□□□□ -0.6
RD3-201ENST00000367002 SEMA3GQ9NS98 782 aa11.27□□□□□ -0.6
RD3-201ENST00000367002 SESN1Q9Y6P5 492 aa11.27□□□□□ -0.6
RD3-201ENST00000367002 RGPD1P0DJD0 1748 aa11.27□□□□□ -0.61
RD3-201ENST00000367002 ZNF99A8MXY4 864 aaPredicted RBP11.27□□□□□ -0.61
RD3-201ENST00000367002 CHRM5P08912 532 aaPredicted RBP11.27□□□□□ -0.61
RD3-201ENST00000367002 FMO3P31513 532 aa11.27□□□□□ -0.61
RD3-201ENST00000367002 RPL26P61254 145 aaKnown RBP11.27□□□□□ -0.61
RD3-201ENST00000367002 BIKQ13323 160 aa11.27□□□□□ -0.61
RD3-201ENST00000367002 TEAD4Q15561 434 aa11.27□□□□□ -0.61
RD3-201ENST00000367002 DPY19L1Q2PZI1 675 aa11.27□□□□□ -0.61
RD3-201ENST00000367002 C14orf80Q86SX3 495 aa11.27□□□□□ -0.61
RD3-201ENST00000367002 DUSP26Q9BV47 211 aa11.27□□□□□ -0.61
RD3-201ENST00000367002 NDOR1Q9UHB4 597 aa11.27□□□□□ -0.61
RD3-201ENST00000367002 TMA7Q9Y2S6 64 aaKnown RBP11.27□□□□□ -0.61
RD3-201ENST00000367002 CITO14578 2027 aa11.27□□□□□ -0.61
RD3-201ENST00000367002 MYOCOSA0A1B0GUC4 107 aa11.27□□□□□ -0.61
RD3-201ENST00000367002 A0A1W2PPW3 197 aa11.27□□□□□ -0.61
RD3-201ENST00000367002 ILVBLA1L0T0 632 aa11.27□□□□□ -0.61
RD3-201ENST00000367002 SAGE2PA6NJ88 616 aa11.27□□□□□ -0.61
RD3-201ENST00000367002 J3QRK9 145 aa11.27□□□□□ -0.61
RD3-201ENST00000367002 CLIC1O00299 241 aa11.27□□□□□ -0.61
RD3-201ENST00000367002 TBX1O43435 398 aa11.27□□□□□ -0.61
RD3-201ENST00000367002 HTRA2O43464 458 aaPredicted RBP11.27□□□□□ -0.61
RD3-201ENST00000367002 C8GP07360 202 aa11.27□□□□□ -0.61
RD3-201ENST00000367002 SLC35E2BP0CK96 405 aa11.27□□□□□ -0.61
RD3-201ENST00000367002 G6PDP11413 515 aa11.27□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms