RNA–Protein interactions for RNA: ENST00000366897.5

PRKN-205, Transcript of parkin RBR E3 ubiquitin protein ligase, humanhuman

TSL 1 (best) BASIC

Gene PRKN, Length 2,877 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKN-205ENST00000366897 PAGE2Q7Z2X7 111 aa13.36□□□□□ -0.27
PRKN-205ENST00000366897 ANKRD13BQ86YJ7 626 aa13.36□□□□□ -0.27
PRKN-205ENST00000366897 UMODL1-AS1Q8N2C9 162 aa13.36□□□□□ -0.27
PRKN-205ENST00000366897 EFHBQ8N7U6 833 aa13.36□□□□□ -0.27
PRKN-205ENST00000366897 TSPEARQ8WU66 669 aa13.36□□□□□ -0.27
PRKN-205ENST00000366897 ABCG8Q9H221 673 aa13.36□□□□□ -0.27
PRKN-205ENST00000366897 ITM2CQ9NQX7 267 aa13.36□□□□□ -0.27
PRKN-205ENST00000366897 ZIM2Q9NZV7 527 aa13.36□□□□□ -0.27
PRKN-205ENST00000366897 A0A0D9SEW6 157 aa13.36□□□□□ -0.27
PRKN-205ENST00000366897 PRMT5O14744 637 aaPredicted RBP13.36□□□□□ -0.27
PRKN-205ENST00000366897 GPR182O15218 404 aa13.36□□□□□ -0.27
PRKN-205ENST00000366897 ANGPTL1O95841 491 aa13.36□□□□□ -0.27
PRKN-205ENST00000366897 HOXD8P13378 290 aaPredicted RBP13.36□□□□□ -0.27
PRKN-205ENST00000366897 TGM1P22735 817 aa13.36□□□□□ -0.27
PRKN-205ENST00000366897 GRK4P32298 578 aa13.36□□□□□ -0.27
PRKN-205ENST00000366897 GDF5P43026 501 aa13.36□□□□□ -0.27
PRKN-205ENST00000366897 RGRP47804 291 aa13.36□□□□□ -0.27
PRKN-205ENST00000366897 CDC42EP1Q00587 391 aa13.36□□□□□ -0.27
PRKN-205ENST00000366897 SPANXN4Q5MJ08 99 aa13.36□□□□□ -0.27
PRKN-205ENST00000366897 GALNT7Q86SF2 657 aa13.36□□□□□ -0.27
PRKN-205ENST00000366897 TLK2Q86UE8 772 aa13.36□□□□□ -0.27
PRKN-205ENST00000366897 SPATA2LQ8IUW3 424 aaPredicted RBP13.36□□□□□ -0.27
PRKN-205ENST00000366897 ARHGAP39Q9C0H5 1083 aa13.36□□□□□ -0.27
PRKN-205ENST00000366897 SYTL2Q9HCH5 934 aa13.36□□□□□ -0.27
PRKN-205ENST00000366897 RASSF1Q9NS23 344 aa13.36□□□□□ -0.27
PRKN-205ENST00000366897 SLC25A37Q9NYZ2 338 aa13.36□□□□□ -0.27
PRKN-205ENST00000366897 SLC45A1Q9Y2W3 748 aa13.36□□□□□ -0.27
PRKN-205ENST00000366897 RAMP2O60895 175 aa13.35□□□□□ -0.27
PRKN-205ENST00000366897 TSPAN12O95859 305 aa13.35□□□□□ -0.27
PRKN-205ENST00000366897 UGT2B4P06133 528 aa13.35□□□□□ -0.27
PRKN-205ENST00000366897 ODC1P11926 461 aa13.35□□□□□ -0.27
PRKN-205ENST00000366897 MASP1P48740 699 aa13.35□□□□□ -0.27
PRKN-205ENST00000366897 TBX4P57082 545 aa13.35□□□□□ -0.27
PRKN-205ENST00000366897 ADAM17P78536 824 aa13.35□□□□□ -0.27
PRKN-205ENST00000366897 CDK5R2Q13319 367 aa13.35□□□□□ -0.27
PRKN-205ENST00000366897 TRIP4Q15650 581 aaPredicted RBP13.35□□□□□ -0.27
PRKN-205ENST00000366897 FXNQ16595 210 aa13.35□□□□□ -0.27
PRKN-205ENST00000366897 GPR142Q7Z601 462 aa13.35□□□□□ -0.27
PRKN-205ENST00000366897 NECAB2Q7Z6G3 386 aa13.35□□□□□ -0.27
PRKN-205ENST00000366897 ANKRD46Q86W74 232 aa13.35□□□□□ -0.27
PRKN-205ENST00000366897 ZNF548Q8NEK5 533 aaPredicted RBP13.35□□□□□ -0.27
PRKN-205ENST00000366897 OR4F6Q8NGB9 312 aa13.35□□□□□ -0.27
PRKN-205ENST00000366897 RORBQ92753 470 aa13.35□□□□□ -0.27
PRKN-205ENST00000366897 ABHD16BQ9H3Z7 469 aa13.35□□□□□ -0.27
PRKN-205ENST00000366897 SPC25Q9HBM1 224 aa13.35□□□□□ -0.27
PRKN-205ENST00000366897 A6NL46 340 aa13.35□□□□□ -0.27
PRKN-205ENST00000366897 BCKDKO14874 412 aa13.35□□□□□ -0.27
PRKN-205ENST00000366897 MLYCDO95822 493 aa13.35□□□□□ -0.27
PRKN-205ENST00000366897 CHRNA1P02708 482 aa13.35□□□□□ -0.27
PRKN-205ENST00000366897 CD6P30203 668 aa13.35□□□□□ -0.27
PRKN-205ENST00000366897 OR1E1P30953 314 aa13.35□□□□□ -0.27
PRKN-205ENST00000366897 CYP4F3Q08477 520 aa13.35□□□□□ -0.27
PRKN-205ENST00000366897 PWP1Q13610 501 aa13.35□□□□□ -0.27
PRKN-205ENST00000366897 GTF2H3Q13889 308 aa13.35□□□□□ -0.27
PRKN-205ENST00000366897 SLC39A12Q504Y0 691 aa13.35□□□□□ -0.27
PRKN-205ENST00000366897 METTL23Q86XA0 190 aa13.35□□□□□ -0.27
PRKN-205ENST00000366897 MSRB3Q8IXL7 192 aa13.35□□□□□ -0.27
PRKN-205ENST00000366897 TTC9BQ8N6N2 239 aa13.35□□□□□ -0.27
PRKN-205ENST00000366897 BRSK1Q8TDC3 778 aa13.35□□□□□ -0.27
PRKN-205ENST00000366897 RHBDF1Q96CC6 855 aa13.35□□□□□ -0.27
PRKN-205ENST00000366897 ITPKCQ96DU7 683 aa13.35□□□□□ -0.27
PRKN-205ENST00000366897 ACBD6Q9BR61 282 aa13.35□□□□□ -0.27
PRKN-205ENST00000366897 SCHIP1Q9P0W5 487 aaPredicted RBP13.35□□□□□ -0.27
PRKN-205ENST00000366897 TMEFF2Q9UIK5 374 aaPredicted RBP13.35□□□□□ -0.27
PRKN-205ENST00000366897 CXCR6O00574 342 aa13.34□□□□□ -0.27
PRKN-205ENST00000366897 TNFRSF10BO14763 440 aa13.34□□□□□ -0.27
PRKN-205ENST00000366897 TLR5O60602 858 aa13.34□□□□□ -0.27
PRKN-205ENST00000366897 MYCLP1P12525 358 aaPredicted RBP13.34□□□□□ -0.27
PRKN-205ENST00000366897 SELENBP1Q13228 472 aa13.34□□□□□ -0.27
PRKN-205ENST00000366897 SF3B4Q15427 424 aaKnown RBP eCLIP13.34□□□□□ -0.27
PRKN-205ENST00000366897 NPTX1Q15818 432 aa13.34□□□□□ -0.27
PRKN-205ENST00000366897 DCP2Q8IU60 420 aaKnown RBP13.34□□□□□ -0.27
PRKN-205ENST00000366897 DPP10Q8N608 796 aa13.34□□□□□ -0.27
PRKN-205ENST00000366897 MDGA1Q8NFP4 955 aa13.34□□□□□ -0.27
PRKN-205ENST00000366897 SLC13A3Q8WWT9 602 aa13.34□□□□□ -0.27
PRKN-205ENST00000366897 MTFMTQ96DP5 389 aaKnown RBP13.34□□□□□ -0.27
PRKN-205ENST00000366897 NUSAP1Q9BXS6 441 aaKnown RBP13.34□□□□□ -0.27
PRKN-205ENST00000366897 UGT2B28Q9BY64 529 aa13.34□□□□□ -0.27
PRKN-205ENST00000366897 POLR1EQ9GZS1 481 aaKnown RBP13.34□□□□□ -0.27
PRKN-205ENST00000366897 SCUBE2Q9NQ36 999 aa13.34□□□□□ -0.27
PRKN-205ENST00000366897 PRDM5Q9NQX1 630 aaPredicted RBP13.34□□□□□ -0.27
PRKN-205ENST00000366897 FKBPLQ9UIM3 349 aa13.34□□□□□ -0.27
PRKN-205ENST00000366897 INTS6Q9UL03 887 aaKnown RBP13.34□□□□□ -0.27
PRKN-205ENST00000366897 PCDHB14Q9Y5E9 798 aa13.34□□□□□ -0.27
PRKN-205ENST00000366897 ANKRD28O15084 1053 aa13.34□□□□□ -0.27
PRKN-205ENST00000366897 LSM1O15116 133 aaKnown RBP13.34□□□□□ -0.27
PRKN-205ENST00000366897 SERPINA1P01009 418 aa13.34□□□□□ -0.27
PRKN-205ENST00000366897 MT-ND2P03891 347 aa13.34□□□□□ -0.27
PRKN-205ENST00000366897 RHOQP17081 205 aa13.34□□□□□ -0.27
PRKN-205ENST00000366897 ITIH1P19827 911 aa13.34□□□□□ -0.27
PRKN-205ENST00000366897 ACVR1Q04771 509 aa13.34□□□□□ -0.27
PRKN-205ENST00000366897 PON2Q15165 354 aa13.34□□□□□ -0.27
PRKN-205ENST00000366897 SPATS1Q496A3 300 aa13.34□□□□□ -0.27
PRKN-205ENST00000366897 BEND5Q7L4P6 421 aa13.34□□□□□ -0.27
PRKN-205ENST00000366897 GLT6D1Q7Z4J2 308 aa13.34□□□□□ -0.27
PRKN-205ENST00000366897 B3GNT8Q7Z7M8 397 aa13.34□□□□□ -0.27
PRKN-205ENST00000366897 CYP4Z1Q86W10 505 aa13.34□□□□□ -0.27
PRKN-205ENST00000366897 ZNF683Q8IZ20 524 aa13.34□□□□□ -0.27
PRKN-205ENST00000366897 NETO1Q8TDF5 533 aa13.34□□□□□ -0.27
PRKN-205ENST00000366897 ELMO1Q92556 727 aa13.34□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms