RNA–Protein interactions for RNA: ENST00000366159.8

TNFRSF1A-202, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 1 (best) BASIC

Gene TNFRSF1A, Length 1,339 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-202ENST00000366159 PITPNM3Q9BZ71 974 aa13.29□□□□□ -0.28
TNFRSF1A-202ENST00000366159 MVB12BQ9H7P6 319 aa13.29□□□□□ -0.28
TNFRSF1A-202ENST00000366159 VPS37BQ9H9H4 285 aa13.29□□□□□ -0.28
TNFRSF1A-202ENST00000366159 LHX9Q9NQ69 397 aa13.29□□□□□ -0.28
TNFRSF1A-202ENST00000366159 C1GALT1Q9NS00 363 aa13.29□□□□□ -0.28
TNFRSF1A-202ENST00000366159 SLC2A6Q9UGQ3 507 aa13.29□□□□□ -0.28
TNFRSF1A-202ENST00000366159 PADI1Q9ULC6 663 aa13.29□□□□□ -0.28
TNFRSF1A-202ENST00000366159 MYO18BQ8IUG5 2567 aa13.29□□□□□ -0.28
TNFRSF1A-202ENST00000366159 SPTA1P02549 2419 aa13.29□□□□□ -0.28
TNFRSF1A-202ENST00000366159 SLC5A10A0PJK1 596 aa13.28□□□□□ -0.28
TNFRSF1A-202ENST00000366159 HEATR9A2RTY3 570 aa13.28□□□□□ -0.28
TNFRSF1A-202ENST00000366159 MATN2O00339 956 aa13.28□□□□□ -0.28
TNFRSF1A-202ENST00000366159 BTN3A1O00481 513 aa13.28□□□□□ -0.28
TNFRSF1A-202ENST00000366159 LIN7AO14910 233 aaPredicted RBP13.28□□□□□ -0.28
TNFRSF1A-202ENST00000366159 CCNYL3P0C7X3 344 aa13.28□□□□□ -0.28
TNFRSF1A-202ENST00000366159 TPBGLP0DKB5 382 aa13.28□□□□□ -0.28
TNFRSF1A-202ENST00000366159 TCN2P20062 427 aa13.28□□□□□ -0.28
TNFRSF1A-202ENST00000366159 ADRA1DP25100 572 aa13.28□□□□□ -0.28
TNFRSF1A-202ENST00000366159 PRDX3P30048 256 aaKnown RBP13.28□□□□□ -0.28
TNFRSF1A-202ENST00000366159 PREPP48147 710 aa13.28□□□□□ -0.28
TNFRSF1A-202ENST00000366159 NFKB2Q00653 900 aa13.28□□□□□ -0.28
TNFRSF1A-202ENST00000366159 RPS6KA1Q15418 735 aa13.28□□□□□ -0.28
TNFRSF1A-202ENST00000366159 CCNG2Q16589 344 aa13.28□□□□□ -0.28
TNFRSF1A-202ENST00000366159 TSTD2Q5T7W7 516 aa13.28□□□□□ -0.28
TNFRSF1A-202ENST00000366159 FBXO38Q6PIJ6 1188 aa13.28□□□□□ -0.28
TNFRSF1A-202ENST00000366159 ZNF534Q76KX8 674 aa13.28□□□□□ -0.28
TNFRSF1A-202ENST00000366159 ADGRF3Q8IZF5 1079 aa13.28□□□□□ -0.28
TNFRSF1A-202ENST00000366159 DNAAF3Q8N9W5 541 aa13.28□□□□□ -0.28
TNFRSF1A-202ENST00000366159 SLC38A9Q8NBW4 561 aa13.28□□□□□ -0.28
TNFRSF1A-202ENST00000366159 OR52E1Q8NGJ3 308 aa13.28□□□□□ -0.28
TNFRSF1A-202ENST00000366159 OR8K5Q8NH50 307 aa13.28□□□□□ -0.28
TNFRSF1A-202ENST00000366159 LCN9Q8WX39 176 aa13.28□□□□□ -0.28
TNFRSF1A-202ENST00000366159 TFGQ92734 400 aaPredicted RBP13.28□□□□□ -0.28
TNFRSF1A-202ENST00000366159 PEX13Q92968 403 aa13.28□□□□□ -0.28
TNFRSF1A-202ENST00000366159 HDAC10Q969S8 669 aa13.28□□□□□ -0.28
TNFRSF1A-202ENST00000366159 STAMBPL1Q96FJ0 436 aa13.28□□□□□ -0.28
TNFRSF1A-202ENST00000366159 LATS2Q9NRM7 1088 aa13.28□□□□□ -0.28
TNFRSF1A-202ENST00000366159 KCND1Q9NSA2 647 aa13.28□□□□□ -0.28
TNFRSF1A-202ENST00000366159 SMARCAL1Q9NZC9 954 aa13.28□□□□□ -0.28
TNFRSF1A-202ENST00000366159 LNPEPQ9UIQ6 1025 aa13.28□□□□□ -0.28
TNFRSF1A-202ENST00000366159 KCND3Q9UK17 655 aa13.28□□□□□ -0.28
TNFRSF1A-202ENST00000366159 ZNF148Q9UQR1 794 aa13.28□□□□□ -0.28
TNFRSF1A-202ENST00000366159 DRG1Q9Y295 367 aaKnown RBP13.28□□□□□ -0.28
TNFRSF1A-202ENST00000366159 KCNMB2Q9Y691 235 aa13.28□□□□□ -0.28
TNFRSF1A-202ENST00000366159 FLNBO75369 2602 aaKnown RBP13.27□□□□□ -0.28
TNFRSF1A-202ENST00000366159 CCDC78A2IDD5 438 aa13.27□□□□□ -0.29
TNFRSF1A-202ENST00000366159 SLC9B1P1A6NJY1 282 aa13.27□□□□□ -0.29
TNFRSF1A-202ENST00000366159 C21orf140B9A014 251 aa13.27□□□□□ -0.29
TNFRSF1A-202ENST00000366159 BHMG1C9JSJ3 638 aaPredicted RBP13.27□□□□□ -0.29
TNFRSF1A-202ENST00000366159 QSOX1O00391 747 aa13.27□□□□□ -0.29
TNFRSF1A-202ENST00000366159 SLC28A2O43868 658 aa13.27□□□□□ -0.29
TNFRSF1A-202ENST00000366159 ZIC2O95409 532 aaPredicted RBP13.27□□□□□ -0.29
TNFRSF1A-202ENST00000366159 GOT2P00505 430 aaKnown RBP13.27□□□□□ -0.29
TNFRSF1A-202ENST00000366159 IFNB1P01574 187 aa13.27□□□□□ -0.29
TNFRSF1A-202ENST00000366159 NTRK1P04629 796 aa13.27□□□□□ -0.29
TNFRSF1A-202ENST00000366159 ZSCAN5DPP0CG00 497 aa13.27□□□□□ -0.29
TNFRSF1A-202ENST00000366159 RPL22P35268 128 aaKnown RBP13.27□□□□□ -0.29
TNFRSF1A-202ENST00000366159 ARCN1P48444 511 aaKnown RBP13.27□□□□□ -0.29
TNFRSF1A-202ENST00000366159 SNX1Q13596 522 aa13.27□□□□□ -0.29
TNFRSF1A-202ENST00000366159 GPR19Q15760 415 aa13.27□□□□□ -0.29
TNFRSF1A-202ENST00000366159 ZNF789Q5FWF6 425 aa13.27□□□□□ -0.29
TNFRSF1A-202ENST00000366159 CT55Q8WUE5 264 aa13.27□□□□□ -0.29
TNFRSF1A-202ENST00000366159 APOBEC4Q8WW27 367 aaKnown RBP13.27□□□□□ -0.29
TNFRSF1A-202ENST00000366159 LRFN5Q96NI6 719 aa13.27□□□□□ -0.29
TNFRSF1A-202ENST00000366159 TLR10Q9BXR5 811 aa13.27□□□□□ -0.29
TNFRSF1A-202ENST00000366159 FAM117AQ9C073 453 aa13.27□□□□□ -0.29
TNFRSF1A-202ENST00000366159 SRMSQ9H3Y6 488 aa13.27□□□□□ -0.29
TNFRSF1A-202ENST00000366159 RAB6BQ9NRW1 208 aa13.27□□□□□ -0.29
TNFRSF1A-202ENST00000366159 PAK5Q9P286 719 aa13.27□□□□□ -0.29
TNFRSF1A-202ENST00000366159 GOLGA6L6A8MZA4 724 aa13.26□□□□□ -0.29
TNFRSF1A-202ENST00000366159 IFRD1O00458 451 aaPredicted RBP13.26□□□□□ -0.29
TNFRSF1A-202ENST00000366159 OR1I1O60431 355 aa13.26□□□□□ -0.29
TNFRSF1A-202ENST00000366159 CREG1O75629 220 aa13.26□□□□□ -0.29
TNFRSF1A-202ENST00000366159 ST6GAL1P15907 406 aa13.26□□□□□ -0.29
TNFRSF1A-202ENST00000366159 PRKAA1Q13131 559 aa13.26□□□□□ -0.29
TNFRSF1A-202ENST00000366159 DNASE1L3Q13609 305 aa13.26□□□□□ -0.29
TNFRSF1A-202ENST00000366159 KRT33BQ14525 404 aa13.26□□□□□ -0.29
TNFRSF1A-202ENST00000366159 SEMA3AQ14563 771 aa13.26□□□□□ -0.29
TNFRSF1A-202ENST00000366159 DEFB109BQ30KR1 87 aa13.26□□□□□ -0.29
TNFRSF1A-202ENST00000366159 TMTC4Q5T4D3 741 aa13.26□□□□□ -0.29
TNFRSF1A-202ENST00000366159 LYPLAL1Q5VWZ2 237 aa13.26□□□□□ -0.29
TNFRSF1A-202ENST00000366159 ARMC6Q6NXE6 501 aa13.26□□□□□ -0.29
TNFRSF1A-202ENST00000366159 C16orf46Q6P387 395 aa13.26□□□□□ -0.29
TNFRSF1A-202ENST00000366159 FAM199XQ6PEV8 388 aaPredicted RBP13.26□□□□□ -0.29
TNFRSF1A-202ENST00000366159 NLRP9Q7RTR0 991 aa13.26□□□□□ -0.29
TNFRSF1A-202ENST00000366159 AMIGO1Q86WK6 493 aa13.26□□□□□ -0.29
TNFRSF1A-202ENST00000366159 LRRC8AQ8IWT6 810 aa13.26□□□□□ -0.29
TNFRSF1A-202ENST00000366159 OR4L1Q8NH43 312 aa13.26□□□□□ -0.29
TNFRSF1A-202ENST00000366159 FLVCR1-AS1Q8TAF5 88 aa13.26□□□□□ -0.29
TNFRSF1A-202ENST00000366159 TRAPPC9Q96Q05 1148 aa13.26□□□□□ -0.29
TNFRSF1A-202ENST00000366159 ALS2CR12Q96Q35 445 aa13.26□□□□□ -0.29
TNFRSF1A-202ENST00000366159 RUFY1Q96T51 708 aa13.26□□□□□ -0.29
TNFRSF1A-202ENST00000366159 GPR87Q9BY21 358 aa13.26□□□□□ -0.29
TNFRSF1A-202ENST00000366159 SYTL2Q9HCH5 934 aa13.26□□□□□ -0.29
TNFRSF1A-202ENST00000366159 EIF2B3Q9NR50 452 aaKnown RBP13.26□□□□□ -0.29
TNFRSF1A-202ENST00000366159 ICKQ9UPZ9 632 aa13.26□□□□□ -0.29
TNFRSF1A-202ENST00000366159 CDYLQ9Y232 598 aa13.26□□□□□ -0.29
TNFRSF1A-202ENST00000366159 ZKSCAN5Q9Y2L8 839 aa13.26□□□□□ -0.29
TNFRSF1A-202ENST00000366159 TCAF1Q9Y4C2 921 aa13.26□□□□□ -0.29
TNFRSF1A-202ENST00000366159 PCDHB3Q9Y5E6 796 aa13.26□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 173.1 ms