RNA–Protein interactions for RNA: ENST00000362011.6

SHISA4-201, Transcript of shisa family member 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SHISA4, Length 1,341 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHISA4-201ENST00000362011 LILRA3Q8N6C8 439 aaPredicted RBP20.21■□□□□ 0.83
SHISA4-201ENST00000362011 C1orf216Q8TAB5 229 aa20.21■□□□□ 0.83
SHISA4-201ENST00000362011 KIAA1191Q96A73 305 aa20.21■□□□□ 0.83
SHISA4-201ENST00000362011 PTERQ96BW5 349 aa20.21■□□□□ 0.83
SHISA4-201ENST00000362011 PAIP2Q9BPZ3 127 aaKnown RBP20.21■□□□□ 0.83
SHISA4-201ENST00000362011 ALG9Q9H6U8 611 aa20.21■□□□□ 0.83
SHISA4-201ENST00000362011 MLXIPLQ9NP71 852 aa20.21■□□□□ 0.83
SHISA4-201ENST00000362011 TM7SF3Q9NS93 570 aa20.21■□□□□ 0.83
SHISA4-201ENST00000362011 TK2O00142 265 aa20.2■□□□□ 0.82
SHISA4-201ENST00000362011 BCAT2O15382 392 aaPredicted RBP20.2■□□□□ 0.82
SHISA4-201ENST00000362011 RASGRP1O95267 797 aa20.2■□□□□ 0.82
SHISA4-201ENST00000362011 TNFP01375 233 aa20.2■□□□□ 0.82
SHISA4-201ENST00000362011 PREPP48147 710 aa20.2■□□□□ 0.82
SHISA4-201ENST00000362011 WDR4P57081 412 aaKnown RBP20.2■□□□□ 0.82
SHISA4-201ENST00000362011 RPA4Q13156 261 aa20.2■□□□□ 0.82
SHISA4-201ENST00000362011 FZD2Q14332 565 aa20.2■□□□□ 0.82
SHISA4-201ENST00000362011 CYHR1Q6ZMK1 362 aa20.2■□□□□ 0.82
SHISA4-201ENST00000362011 HID1Q8IV36 788 aa20.2■□□□□ 0.82
SHISA4-201ENST00000362011 SLC22A15Q8IZD6 547 aa20.2■□□□□ 0.82
SHISA4-201ENST00000362011 RHEBL1Q8TAI7 183 aa20.2■□□□□ 0.82
SHISA4-201ENST00000362011 RDH11Q8TC12 318 aa20.2■□□□□ 0.82
SHISA4-201ENST00000362011 SKA1Q96BD8 255 aa20.2■□□□□ 0.82
SHISA4-201ENST00000362011 KLC4Q9NSK0 619 aa20.2■□□□□ 0.82
SHISA4-201ENST00000362011 DNAJC16Q9Y2G8 782 aa20.2■□□□□ 0.82
SHISA4-201ENST00000362011 CHD6Q8TD26 2715 aa20.2■□□□□ 0.82
SHISA4-201ENST00000362011 H3BM21 787 aa20.19■□□□□ 0.82
SHISA4-201ENST00000362011 TLR4O00206 839 aa20.19■□□□□ 0.82
SHISA4-201ENST00000362011 CDC7O00311 574 aa20.19■□□□□ 0.82
SHISA4-201ENST00000362011 KCNK5O95279 499 aa20.19■□□□□ 0.82
SHISA4-201ENST00000362011 DHRS4L1P0CG22 281 aa20.19■□□□□ 0.82
SHISA4-201ENST00000362011 ITPKAP23677 461 aa20.19■□□□□ 0.82
SHISA4-201ENST00000362011 EIF2B5Q13144 721 aaKnown RBP20.19■□□□□ 0.82
SHISA4-201ENST00000362011 OR4D1Q15615 310 aa20.19■□□□□ 0.82
SHISA4-201ENST00000362011 TSNQ15631 228 aaKnown RBP20.19■□□□□ 0.82
SHISA4-201ENST00000362011 XKR5Q6UX68 686 aa20.19■□□□□ 0.82
SHISA4-201ENST00000362011 FAM83HQ6ZRV2 1179 aaPredicted RBP20.19■□□□□ 0.82
SHISA4-201ENST00000362011 ADAMTSL2Q86TH1 951 aa20.19■□□□□ 0.82
SHISA4-201ENST00000362011 PARGQ86W56 976 aa20.19■□□□□ 0.82
SHISA4-201ENST00000362011 STAG3L4Q8TBR4 150 aa20.19■□□□□ 0.82
SHISA4-201ENST00000362011 SKA2Q8WVK7 121 aaPredicted RBP20.19■□□□□ 0.82
SHISA4-201ENST00000362011 DYDC1Q8WWB3 177 aa20.19■□□□□ 0.82
SHISA4-201ENST00000362011 DPEP2Q9H4A9 486 aa20.19■□□□□ 0.82
SHISA4-201ENST00000362011 CPSF2Q9P2I0 782 aaKnown RBP20.19■□□□□ 0.82
SHISA4-201ENST00000362011 IKZF3Q9UKT9 509 aa20.19■□□□□ 0.82
SHISA4-201ENST00000362011 RNF112Q9ULX5 631 aa20.19■□□□□ 0.82
SHISA4-201ENST00000362011 KCNK6Q9Y257 313 aa20.19■□□□□ 0.82
SHISA4-201ENST00000362011 DGKBQ9Y6T7 804 aa20.19■□□□□ 0.82
SHISA4-201ENST00000362011 PCM1Q15154 2024 aa20.19■□□□□ 0.82
SHISA4-201ENST00000362011 SDK1Q7Z5N4 2213 aa20.18■□□□□ 0.82
SHISA4-201ENST00000362011 KERAO60938 352 aa20.18■□□□□ 0.82
SHISA4-201ENST00000362011 C8GP07360 202 aa20.18■□□□□ 0.82
SHISA4-201ENST00000362011 TAC1P20366 129 aa20.18■□□□□ 0.82
SHISA4-201ENST00000362011 PDHA2P29803 388 aa20.18■□□□□ 0.82
SHISA4-201ENST00000362011 MAPK9P45984 424 aa20.18■□□□□ 0.82
SHISA4-201ENST00000362011 IL9RQ01113 521 aa20.18■□□□□ 0.82
SHISA4-201ENST00000362011 TEAD4Q15561 434 aa20.18■□□□□ 0.82
SHISA4-201ENST00000362011 METRNLQ641Q3 311 aa20.18■□□□□ 0.82
SHISA4-201ENST00000362011 LAYNQ6UX15 382 aa20.18■□□□□ 0.82
SHISA4-201ENST00000362011 TAX1BP1Q86VP1 789 aa20.18■□□□□ 0.82
SHISA4-201ENST00000362011 ATOH8Q96SQ7 321 aa20.18■□□□□ 0.82
SHISA4-201ENST00000362011 OSGEPL1Q9H4B0 414 aa20.18■□□□□ 0.82
SHISA4-201ENST00000362011 SMOC1Q9H4F8 434 aa20.18■□□□□ 0.82
SHISA4-201ENST00000362011 COPG2Q9UBF2 871 aa20.18■□□□□ 0.82
SHISA4-201ENST00000362011 ACSL5Q9ULC5 683 aa20.18■□□□□ 0.82
SHISA4-201ENST00000362011 PNMA8BQ9ULN7 279 aaPredicted RBP20.18■□□□□ 0.82
SHISA4-201ENST00000362011 PLEKHM1Q9Y4G2 1056 aa20.18■□□□□ 0.82
SHISA4-201ENST00000362011 ATXN2Q99700 1313 aaKnown RBP20.18■□□□□ 0.82
SHISA4-201ENST00000362011 A0A1B0GTW7 788 aa20.17■□□□□ 0.82
SHISA4-201ENST00000362011 SYCE1LA8MT33 242 aa20.17■□□□□ 0.82
SHISA4-201ENST00000362011 TARM1B6A8C7 271 aa20.17■□□□□ 0.82
SHISA4-201ENST00000362011 SCAMP1O15126 338 aa20.17■□□□□ 0.82
SHISA4-201ENST00000362011 VILLO15195 856 aa20.17■□□□□ 0.82
SHISA4-201ENST00000362011 SBK3P0C264 359 aa20.17■□□□□ 0.82
SHISA4-201ENST00000362011 MYL2P10916 166 aa20.17■□□□□ 0.82
SHISA4-201ENST00000362011 CPA3P15088 417 aa20.17■□□□□ 0.82
SHISA4-201ENST00000362011 GNSP15586 552 aa20.17■□□□□ 0.82
SHISA4-201ENST00000362011 SERPINB4P48594 390 aa20.17■□□□□ 0.82
SHISA4-201ENST00000362011 BLKP51451 505 aa20.17■□□□□ 0.82
SHISA4-201ENST00000362011 AFF3P51826 1226 aaKnown RBP20.17■□□□□ 0.82
SHISA4-201ENST00000362011 HK3P52790 923 aa20.17■□□□□ 0.82
SHISA4-201ENST00000362011 GYS2P54840 703 aa20.17■□□□□ 0.82
SHISA4-201ENST00000362011 C21orf59P57076 290 aa20.17■□□□□ 0.82
SHISA4-201ENST00000362011 SP140Q13342 867 aa20.17■□□□□ 0.82
SHISA4-201ENST00000362011 LRP8Q14114 963 aa20.17■□□□□ 0.82
SHISA4-201ENST00000362011 ZYG11AQ6WRX3 759 aa20.17■□□□□ 0.82
SHISA4-201ENST00000362011 FRA10AC1Q70Z53 315 aa20.17■□□□□ 0.82
SHISA4-201ENST00000362011 PHACTR4Q8IZ21 702 aa20.17■□□□□ 0.82
SHISA4-201ENST00000362011 TMEM151AQ8N4L1 468 aa20.17■□□□□ 0.82
SHISA4-201ENST00000362011 EXT2Q93063 718 aa20.17■□□□□ 0.82
SHISA4-201ENST00000362011 FOPNLQ96NB1 174 aa20.17■□□□□ 0.82
SHISA4-201ENST00000362011 TRNAU1APQ9NX07 287 aaKnown RBP20.17■□□□□ 0.82
SHISA4-201ENST00000362011 SUSD2Q9UGT4 822 aa20.17■□□□□ 0.82
SHISA4-201ENST00000362011 SUPT3HB4E1H0 165 aa20.16■□□□□ 0.82
SHISA4-201ENST00000362011 SLC16A5O15375 505 aa20.16■□□□□ 0.82
SHISA4-201ENST00000362011 BIRC5O15392 142 aa20.16■□□□□ 0.82
SHISA4-201ENST00000362011 SMIM24O75264 130 aa20.16■□□□□ 0.82
SHISA4-201ENST00000362011 SUPT3HO75486 399 aa20.16■□□□□ 0.82
SHISA4-201ENST00000362011 BPGMP07738 259 aa20.16■□□□□ 0.82
SHISA4-201ENST00000362011 IDSP22304 550 aa20.16■□□□□ 0.82
SHISA4-201ENST00000362011 MDH1P40925 334 aaKnown RBP20.16■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms