RNA–Protein interactions for RNA: ENST00000361716.7

VAMP1-201, Transcript of vesicle associated membrane protein 1, humanhuman

TSL 1 (best) BASIC

Gene VAMP1, Length 3,449 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP1-201ENST00000361716 C7P10643 843 aa12.5□□□□□ -0.41
VAMP1-201ENST00000361716 SLC26A3P40879 764 aa12.5□□□□□ -0.41
VAMP1-201ENST00000361716 AFF1P51825 1210 aaKnown RBP12.5□□□□□ -0.41
VAMP1-201ENST00000361716 LILRA4P59901 499 aa12.5□□□□□ -0.41
VAMP1-201ENST00000361716 GALNT3Q14435 633 aa12.5□□□□□ -0.41
VAMP1-201ENST00000361716 UNC50Q53HI1 259 aa12.5□□□□□ -0.41
VAMP1-201ENST00000361716 ZNF484Q5JVG2 852 aa12.5□□□□□ -0.41
VAMP1-201ENST00000361716 GET4Q7L5D6 327 aaPredicted RBP12.5□□□□□ -0.41
VAMP1-201ENST00000361716 CAMKK1Q8N5S9 505 aa12.5□□□□□ -0.41
VAMP1-201ENST00000361716 CLHC1Q8NHS4 586 aa12.5□□□□□ -0.41
VAMP1-201ENST00000361716 SENP8Q96LD8 212 aa12.5□□□□□ -0.41
VAMP1-201ENST00000361716 FBXO8Q9NRD0 319 aa12.5□□□□□ -0.41
VAMP1-201ENST00000361716 POLR3BQ9NW08 1133 aaPredicted RBP12.5□□□□□ -0.41
VAMP1-201ENST00000361716 FAM8A1Q9UBU6 413 aa12.5□□□□□ -0.41
VAMP1-201ENST00000361716 RNF112Q9ULX5 631 aa12.5□□□□□ -0.41
VAMP1-201ENST00000361716 NUP214P35658 2090 aaPredicted RBP12.5□□□□□ -0.41
VAMP1-201ENST00000361716 TCRBV5S2A0A599 114 aa12.49□□□□□ -0.41
VAMP1-201ENST00000361716 FKBP9O95302 570 aa12.49□□□□□ -0.41
VAMP1-201ENST00000361716 MYL3P08590 195 aa12.49□□□□□ -0.41
VAMP1-201ENST00000361716 UBL4AP11441 157 aa12.49□□□□□ -0.41
VAMP1-201ENST00000361716 PRDX3P30048 256 aaKnown RBP12.49□□□□□ -0.41
VAMP1-201ENST00000361716 POU6F2P78424 691 aaPredicted RBP12.49□□□□□ -0.41
VAMP1-201ENST00000361716 FCHO2Q0JRZ9 810 aa12.49□□□□□ -0.41
VAMP1-201ENST00000361716 SLAMF1Q13291 335 aa12.49□□□□□ -0.41
VAMP1-201ENST00000361716 ZNF181Q2M3W8 571 aa12.49□□□□□ -0.41
VAMP1-201ENST00000361716 ZNF678Q5SXM1 525 aa12.49□□□□□ -0.41
VAMP1-201ENST00000361716 BLOC1S3Q6QNY0 202 aa12.49□□□□□ -0.41
VAMP1-201ENST00000361716 HACD2Q6Y1H2 254 aa12.49□□□□□ -0.41
VAMP1-201ENST00000361716 BEND5Q7L4P6 421 aa12.49□□□□□ -0.41
VAMP1-201ENST00000361716 AMIGO1Q86WK6 493 aa12.49□□□□□ -0.41
VAMP1-201ENST00000361716 CIR1Q86X95 450 aaPredicted RBP12.49□□□□□ -0.41
VAMP1-201ENST00000361716 OR6F1Q8NGZ6 308 aa12.49□□□□□ -0.41
VAMP1-201ENST00000361716 SH3RF2Q8TEC5 729 aa12.49□□□□□ -0.41
VAMP1-201ENST00000361716 SKA2Q8WVK7 121 aaPredicted RBP12.49□□□□□ -0.41
VAMP1-201ENST00000361716 ISL2Q96A47 359 aa12.49□□□□□ -0.41
VAMP1-201ENST00000361716 UGT2B28Q9BY64 529 aa12.49□□□□□ -0.41
VAMP1-201ENST00000361716 A0A096LPI6 279 aa12.49□□□□□ -0.41
VAMP1-201ENST00000361716 A0A0U1RQS6 177 aa12.49□□□□□ -0.41
VAMP1-201ENST00000361716 LOC105371267A0A1B0GV96 52 aa12.49□□□□□ -0.41
VAMP1-201ENST00000361716 hCG_2039718K7EN88 272 aa12.49□□□□□ -0.41
VAMP1-201ENST00000361716 ERVH48-1M5A8F1 160 aa12.49□□□□□ -0.41
VAMP1-201ENST00000361716 NOS1APO75052 506 aaPredicted RBP12.49□□□□□ -0.41
VAMP1-201ENST00000361716 CYP11A1P05108 521 aa12.49□□□□□ -0.41
VAMP1-201ENST00000361716 IMPDH1P20839 514 aa12.49□□□□□ -0.41
VAMP1-201ENST00000361716 C21orf33P30042 268 aaPredicted RBP12.49□□□□□ -0.41
VAMP1-201ENST00000361716 GRK3P35626 688 aa12.49□□□□□ -0.41
VAMP1-201ENST00000361716 IDH2P48735 452 aaKnown RBP12.49□□□□□ -0.41
VAMP1-201ENST00000361716 MASP1P48740 699 aa12.49□□□□□ -0.41
VAMP1-201ENST00000361716 RAB25P57735 213 aa12.49□□□□□ -0.41
VAMP1-201ENST00000361716 TUBA1BP68363 451 aa12.49□□□□□ -0.41
VAMP1-201ENST00000361716 SV2CQ496J9 727 aa12.49□□□□□ -0.41
VAMP1-201ENST00000361716 ZNF648Q5T619 568 aaPredicted RBP12.49□□□□□ -0.41
VAMP1-201ENST00000361716 CYHR1Q6ZMK1 362 aa12.49□□□□□ -0.41
VAMP1-201ENST00000361716 TUBA1AQ71U36 451 aa12.49□□□□□ -0.41
VAMP1-201ENST00000361716 B3GNT8Q7Z7M8 397 aa12.49□□□□□ -0.41
VAMP1-201ENST00000361716 CDH24Q86UP0 819 aa12.49□□□□□ -0.41
VAMP1-201ENST00000361716 FAM217AQ8IXS0 508 aa12.49□□□□□ -0.41
VAMP1-201ENST00000361716 GTF2H4Q92759 462 aa12.49□□□□□ -0.41
VAMP1-201ENST00000361716 PCED1BQ96HM7 432 aa12.49□□□□□ -0.41
VAMP1-201ENST00000361716 LRRC3Q9BY71 257 aa12.49□□□□□ -0.41
VAMP1-201ENST00000361716 OR51E2Q9H255 320 aa12.49□□□□□ -0.41
VAMP1-201ENST00000361716 ABCD2Q9UBJ2 740 aa12.49□□□□□ -0.41
VAMP1-201ENST00000361716 TRHDEQ9UKU6 1024 aa12.49□□□□□ -0.41
VAMP1-201ENST00000361716 TRIM64BA6NI03 449 aa12.49□□□□□ -0.41
VAMP1-201ENST00000361716 SMLR1H3BR10 107 aa12.49□□□□□ -0.41
VAMP1-201ENST00000361716 I6L893 689 aaPredicted RBP12.49□□□□□ -0.41
VAMP1-201ENST00000361716 RGS13O14921 159 aa12.49□□□□□ -0.41
VAMP1-201ENST00000361716 GUCA1CO95843 209 aa12.49□□□□□ -0.41
VAMP1-201ENST00000361716 ARHGDIAP52565 204 aa12.49□□□□□ -0.41
VAMP1-201ENST00000361716 DSC2Q02487 901 aa12.49□□□□□ -0.41
VAMP1-201ENST00000361716 TMEM179BQ7Z7N9 219 aa12.49□□□□□ -0.41
VAMP1-201ENST00000361716 TAC4Q86UU9 113 aa12.49□□□□□ -0.41
VAMP1-201ENST00000361716 PROSER1Q86XN7 944 aa12.49□□□□□ -0.41
VAMP1-201ENST00000361716 PHF10Q8WUB8 498 aaKnown RBP12.49□□□□□ -0.41
VAMP1-201ENST00000361716 GFM1Q96RP9 751 aaKnown RBP12.49□□□□□ -0.41
VAMP1-201ENST00000361716 CARS2Q9HA77 564 aaKnown RBP12.49□□□□□ -0.41
VAMP1-201ENST00000361716 GLOD4Q9HC38 313 aa12.49□□□□□ -0.41
VAMP1-201ENST00000361716 C8orf4Q9NR00 106 aa12.49□□□□□ -0.41
VAMP1-201ENST00000361716 ADARB2Q9NS39 739 aaKnown RBP12.49□□□□□ -0.41
VAMP1-201ENST00000361716 MAGEL2Q9UJ55 1249 aa12.49□□□□□ -0.41
VAMP1-201ENST00000361716 ISPDA4D126 451 aa12.48□□□□□ -0.41
VAMP1-201ENST00000361716 MOXD2PA6NHM9 499 aa12.48□□□□□ -0.41
VAMP1-201ENST00000361716 SNTNA6NMZ2 147 aa12.48□□□□□ -0.41
VAMP1-201ENST00000361716 DFNA5O60443 496 aa12.48□□□□□ -0.41
VAMP1-201ENST00000361716 PTTG1O95997 202 aa12.48□□□□□ -0.41
VAMP1-201ENST00000361716 ISL1P61371 349 aa12.48□□□□□ -0.41
VAMP1-201ENST00000361716 POU4F1Q01851 419 aa12.48□□□□□ -0.41
VAMP1-201ENST00000361716 MXD1Q05195 221 aa12.48□□□□□ -0.41
VAMP1-201ENST00000361716 NR6A1Q15406 480 aa12.48□□□□□ -0.41
VAMP1-201ENST00000361716 PAMR1Q6UXH9 720 aa12.48□□□□□ -0.41
VAMP1-201ENST00000361716 UNC93AQ86WB7 457 aa12.48□□□□□ -0.41
VAMP1-201ENST00000361716 MTMR14Q8NCE2 650 aa12.48□□□□□ -0.41
VAMP1-201ENST00000361716 HCAR2Q8TDS4 363 aa12.48□□□□□ -0.41
VAMP1-201ENST00000361716 CLSTN3Q9BQT9 956 aa12.48□□□□□ -0.41
VAMP1-201ENST00000361716 SLC39A8Q9C0K1 460 aa12.48□□□□□ -0.41
VAMP1-201ENST00000361716 SLC7A5P2Q9GIP4 190 aa12.48□□□□□ -0.41
VAMP1-201ENST00000361716 CD274Q9NZQ7 290 aa12.48□□□□□ -0.41
VAMP1-201ENST00000361716 DNAJB9Q9UBS3 223 aa12.48□□□□□ -0.41
VAMP1-201ENST00000361716 AFF4Q9UHB7 1163 aaKnown RBP12.48□□□□□ -0.41
VAMP1-201ENST00000361716 SCN1AP35498 2009 aa12.48□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms