RNA–Protein interactions for RNA: ENST00000361545.9

CLIP2-202, Transcript of CAP-Gly domain containing linker protein 2, humanhuman

TSL 1 (best) BASIC

Gene CLIP2, Length 5,445 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP2-202ENST00000361545 TNFP01375 233 aa18.28■□□□□ 0.52
CLIP2-202ENST00000361545 IFNGP01579 166 aa18.28■□□□□ 0.52
CLIP2-202ENST00000361545 CHN2P52757 468 aa18.28■□□□□ 0.52
CLIP2-202ENST00000361545 PNLIPRP1P54315 467 aa18.28■□□□□ 0.52
CLIP2-202ENST00000361545 CLDN19Q8N6F1 224 aa18.28■□□□□ 0.52
CLIP2-202ENST00000361545 PIH1D2Q8WWB5 315 aa18.28■□□□□ 0.52
CLIP2-202ENST00000361545 LENG8Q96PV6 779 aaPredicted RBP18.28■□□□□ 0.52
CLIP2-202ENST00000361545 MIPEPQ99797 713 aa18.28■□□□□ 0.52
CLIP2-202ENST00000361545 RAPGEFL1Q9UHV5 662 aa18.28■□□□□ 0.52
CLIP2-202ENST00000361545 CHD2O14647 1828 aaKnown RBP18.27■□□□□ 0.52
CLIP2-202ENST00000361545 TSC22D2O75157 780 aa18.27■□□□□ 0.52
CLIP2-202ENST00000361545 ZSWIM7Q19AV6 140 aa18.27■□□□□ 0.52
CLIP2-202ENST00000361545 RPTNQ6XPR3 784 aa18.27■□□□□ 0.52
CLIP2-202ENST00000361545 YTHDF3Q7Z739 585 aaKnown RBP18.27■□□□□ 0.52
CLIP2-202ENST00000361545 NEK6Q9HC98 313 aa18.27■□□□□ 0.52
CLIP2-202ENST00000361545 KCNK6Q9Y257 313 aa18.27■□□□□ 0.52
CLIP2-202ENST00000361545 TMEM98Q9Y2Y6 226 aa18.27■□□□□ 0.52
CLIP2-202ENST00000361545 KCTD3Q9Y597 815 aa18.27■□□□□ 0.52
CLIP2-202ENST00000361545 KDELR3O43731 214 aa18.27■□□□□ 0.52
CLIP2-202ENST00000361545 CTSKP43235 329 aa18.27■□□□□ 0.52
CLIP2-202ENST00000361545 ITPRIPL2Q3MIP1 535 aa18.27■□□□□ 0.52
CLIP2-202ENST00000361545 NEK5Q6P3R8 708 aa18.27■□□□□ 0.52
CLIP2-202ENST00000361545 RBM15BQ8NDT2 890 aaKnown RBP18.27■□□□□ 0.52
CLIP2-202ENST00000361545 KAT2AQ92830 837 aa18.27■□□□□ 0.52
CLIP2-202ENST00000361545 ADAMTS10Q9H324 1103 aa18.27■□□□□ 0.52
CLIP2-202ENST00000361545 PRDM8Q9NQV8 689 aa18.27■□□□□ 0.52
CLIP2-202ENST00000361545 PDP1Q9P0J1 537 aaPredicted RBP18.27■□□□□ 0.52
CLIP2-202ENST00000361545 A0A0J9YVX5 310 aa18.27■□□□□ 0.52
CLIP2-202ENST00000361545 A8MU76 341 aa18.27■□□□□ 0.52
CLIP2-202ENST00000361545 MGRN1O60291 552 aa18.27■□□□□ 0.52
CLIP2-202ENST00000361545 POP7O75817 140 aaKnown RBP18.27■□□□□ 0.52
CLIP2-202ENST00000361545 STATHP02808 62 aa18.27■□□□□ 0.52
CLIP2-202ENST00000361545 CREB1P16220 341 aa18.27■□□□□ 0.52
CLIP2-202ENST00000361545 MTHFRP42898 656 aa18.27■□□□□ 0.52
CLIP2-202ENST00000361545 PDK3Q15120 406 aa18.27■□□□□ 0.52
CLIP2-202ENST00000361545 RFX4Q33E94 735 aa18.27■□□□□ 0.52
CLIP2-202ENST00000361545 REP15Q6BDI9 236 aa18.27■□□□□ 0.52
CLIP2-202ENST00000361545 C11orf65Q8NCR3 313 aa18.27■□□□□ 0.52
CLIP2-202ENST00000361545 TSPAN14Q8NG11 270 aa18.27■□□□□ 0.52
CLIP2-202ENST00000361545 LGALS13Q9UHV8 139 aa18.27■□□□□ 0.52
CLIP2-202ENST00000361545 ERVK-11Q9UQG0 969 aa18.27■□□□□ 0.52
CLIP2-202ENST00000361545 PITRM1Q5JRX3 1037 aa18.27■□□□□ 0.51
CLIP2-202ENST00000361545 CCM2Q9BSQ5 444 aa18.27■□□□□ 0.51
CLIP2-202ENST00000361545 BCL2L14Q9BZR8 327 aa18.27■□□□□ 0.51
CLIP2-202ENST00000361545 DAPK2Q9UIK4 370 aa18.27■□□□□ 0.51
CLIP2-202ENST00000361545 ATP1B2P14415 290 aaPredicted RBP18.26■□□□□ 0.51
CLIP2-202ENST00000361545 IL12BP29460 328 aa18.26■□□□□ 0.51
CLIP2-202ENST00000361545 SLBPQ14493 270 aaKnown RBP eCLIP18.26■□□□□ 0.51
CLIP2-202ENST00000361545 FAM174BQ3ZCQ3 159 aa18.26■□□□□ 0.51
CLIP2-202ENST00000361545 FAM91A1Q658Y4 838 aa18.26■□□□□ 0.51
CLIP2-202ENST00000361545 SLC39A5Q6ZMH5 540 aa18.26■□□□□ 0.51
CLIP2-202ENST00000361545 TBC1D21Q8IYX1 336 aa18.26■□□□□ 0.51
CLIP2-202ENST00000361545 KLHL25Q9H0H3 589 aa18.26■□□□□ 0.51
CLIP2-202ENST00000361545 TFB2MQ9H5Q4 396 aaKnown RBP18.26■□□□□ 0.51
CLIP2-202ENST00000361545 IL23AQ9NPF7 189 aa18.26■□□□□ 0.51
CLIP2-202ENST00000361545 HAS3O00219 553 aa18.26■□□□□ 0.51
CLIP2-202ENST00000361545 GPR32O75388 356 aa18.26■□□□□ 0.51
CLIP2-202ENST00000361545 SIX3O95343 332 aaPredicted RBP18.26■□□□□ 0.51
CLIP2-202ENST00000361545 PRPS2P11908 318 aa18.26■□□□□ 0.51
CLIP2-202ENST00000361545 C14orf80Q86SX3 495 aa18.26■□□□□ 0.51
CLIP2-202ENST00000361545 DCAF4L2Q8NA75 395 aa18.26■□□□□ 0.51
CLIP2-202ENST00000361545 PXYLP1Q8TE99 480 aa18.26■□□□□ 0.51
CLIP2-202ENST00000361545 SGIP1Q9BQI5 828 aa18.26■□□□□ 0.51
CLIP2-202ENST00000361545 RUVBL1Q9Y265 456 aaKnown RBP18.26■□□□□ 0.51
CLIP2-202ENST00000361545 TGFB1P01137 390 aa18.26■□□□□ 0.51
CLIP2-202ENST00000361545 RPS14P62263 151 aaKnown RBP18.26■□□□□ 0.51
CLIP2-202ENST00000361545 MED22Q15528 200 aa18.26■□□□□ 0.51
CLIP2-202ENST00000361545 TMC8Q8IU68 726 aa18.26■□□□□ 0.51
CLIP2-202ENST00000361545 ENKURQ8TC29 256 aa18.26■□□□□ 0.51
CLIP2-202ENST00000361545 MRPL39Q9NYK5 338 aaKnown RBP18.26■□□□□ 0.51
CLIP2-202ENST00000361545 STON1Q9Y6Q2 735 aa18.26■□□□□ 0.51
CLIP2-202ENST00000361545 SPEF2Q9C093 1822 aa18.26■□□□□ 0.51
CLIP2-202ENST00000361545 MAGEB17A8MXT2 336 aa18.26■□□□□ 0.51
CLIP2-202ENST00000361545 IQCJ-SCHIP1C9J366 451 aaPredicted RBP18.26■□□□□ 0.51
CLIP2-202ENST00000361545 CHRNGP07510 517 aa18.26■□□□□ 0.51
CLIP2-202ENST00000361545 CASP9P55211 416 aa18.26■□□□□ 0.51
CLIP2-202ENST00000361545 PHF19Q5T6S3 580 aa18.26■□□□□ 0.51
CLIP2-202ENST00000361545 PEX5LQ8IYB4 626 aa18.26■□□□□ 0.51
CLIP2-202ENST00000361545 SFRP1Q8N474 314 aa18.26■□□□□ 0.51
CLIP2-202ENST00000361545 LRRC15Q8TF66 581 aa18.26■□□□□ 0.51
CLIP2-202ENST00000361545 SLC22A18Q96BI1 424 aa18.26■□□□□ 0.51
CLIP2-202ENST00000361545 ADAP2Q9NPF8 381 aa18.26■□□□□ 0.51
CLIP2-202ENST00000361545 NECTIN3Q9NQS3 549 aa18.26■□□□□ 0.51
CLIP2-202ENST00000361545 FAM86C2PA6NEL3 165 aa18.25■□□□□ 0.51
CLIP2-202ENST00000361545 PGM3O95394 542 aa18.25■□□□□ 0.51
CLIP2-202ENST00000361545 IFNW1P05000 195 aa18.25■□□□□ 0.51
CLIP2-202ENST00000361545 GIMD1P0DJR0 217 aa18.25■□□□□ 0.51
CLIP2-202ENST00000361545 CCR8P51685 355 aa18.25■□□□□ 0.51
CLIP2-202ENST00000361545 TDRPQ86YL5 185 aa18.25■□□□□ 0.51
CLIP2-202ENST00000361545 OR10A6Q8NH74 314 aa18.25■□□□□ 0.51
CLIP2-202ENST00000361545 ANKHQ9HCJ1 492 aa18.25■□□□□ 0.51
CLIP2-202ENST00000361545 XKRYO14609 159 aa18.25■□□□□ 0.51
CLIP2-202ENST00000361545 EDNRBP24530 442 aa18.25■□□□□ 0.51
CLIP2-202ENST00000361545 TPRG1Q6ZUI0 275 aa18.25■□□□□ 0.51
CLIP2-202ENST00000361545 BANPQ8N9N5 519 aa18.25■□□□□ 0.51
CLIP2-202ENST00000361545 FAM110BQ8TC76 370 aa18.25■□□□□ 0.51
CLIP2-202ENST00000361545 LPGAT1Q92604 370 aa18.25■□□□□ 0.51
CLIP2-202ENST00000361545 PNMA8CA0A1B0GUJ8 204 aa18.25■□□□□ 0.51
CLIP2-202ENST00000361545 PRMT3O60678 531 aa18.25■□□□□ 0.51
CLIP2-202ENST00000361545 KERAO60938 352 aa18.25■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms