RNA–Protein interactions for RNA: ENST00000361439.8

NSMCE1-201, Transcript of NSE1 homolog, SMC5-SMC6 complex component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NSMCE1, Length 1,067 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NSMCE1-201ENST00000361439 LILRA5A6NI73 299 aa13.5□□□□□ -0.25
NSMCE1-201ENST00000361439 OR52A4PA6NMU1 304 aa13.5□□□□□ -0.25
NSMCE1-201ENST00000361439 RHPN2P1A8MT19 583 aa13.5□□□□□ -0.25
NSMCE1-201ENST00000361439 PIAS1O75925 651 aa13.5□□□□□ -0.25
NSMCE1-201ENST00000361439 MATN4O95460 622 aa13.5□□□□□ -0.25
NSMCE1-201ENST00000361439 MPC1LP0DKB6 136 aa13.5□□□□□ -0.25
NSMCE1-201ENST00000361439 CRABP2P29373 138 aa13.5□□□□□ -0.25
NSMCE1-201ENST00000361439 HSD17B3P37058 310 aa13.5□□□□□ -0.25
NSMCE1-201ENST00000361439 SLC26A3P40879 764 aa13.5□□□□□ -0.25
NSMCE1-201ENST00000361439 CCNFP41002 786 aa13.5□□□□□ -0.25
NSMCE1-201ENST00000361439 SLC19A1P41440 591 aa13.5□□□□□ -0.25
NSMCE1-201ENST00000361439 PREPP48147 710 aa13.5□□□□□ -0.25
NSMCE1-201ENST00000361439 EPHA4P54764 986 aa13.5□□□□□ -0.25
NSMCE1-201ENST00000361439 SLC12A2P55011 1212 aa13.5□□□□□ -0.25
NSMCE1-201ENST00000361439 IL2P60568 153 aa13.5□□□□□ -0.25
NSMCE1-201ENST00000361439 E2F1Q01094 437 aa13.5□□□□□ -0.25
NSMCE1-201ENST00000361439 DNAJC3Q13217 504 aa13.5□□□□□ -0.25
NSMCE1-201ENST00000361439 EFTUD2Q15029 972 aaKnown RBP eCLIP13.5□□□□□ -0.253e-6■■■■■ 41.9
NSMCE1-201ENST00000361439 ZKSCAN8Q15776 578 aaPredicted RBP13.5□□□□□ -0.25
NSMCE1-201ENST00000361439 ADGRD1Q6QNK2 874 aa13.5□□□□□ -0.25
NSMCE1-201ENST00000361439 NKAPQ8N5F7 415 aaKnown RBP13.5□□□□□ -0.25
NSMCE1-201ENST00000361439 SIDT2Q8NBJ9 832 aaKnown RBP13.5□□□□□ -0.25
NSMCE1-201ENST00000361439 MYRIPQ8NFW9 859 aa13.5□□□□□ -0.25
NSMCE1-201ENST00000361439 OR5K2Q8NHB8 316 aa13.5□□□□□ -0.25
NSMCE1-201ENST00000361439 GIMAP7Q8NHV1 300 aa13.5□□□□□ -0.25
NSMCE1-201ENST00000361439 MAGEC3Q8TD91 643 aa13.5□□□□□ -0.25
NSMCE1-201ENST00000361439 HNRNPLLQ8WVV9 542 aaKnown RBP13.5□□□□□ -0.25
NSMCE1-201ENST00000361439 MTBPQ96DY7 904 aa13.5□□□□□ -0.25
NSMCE1-201ENST00000361439 RMDN2Q96LZ7 410 aa13.5□□□□□ -0.25
NSMCE1-201ENST00000361439 CAMK1GQ96NX5 476 aa13.5□□□□□ -0.25
NSMCE1-201ENST00000361439 CAMSAP3Q9P1Y5 1249 aaPredicted RBP13.5□□□□□ -0.25
NSMCE1-201ENST00000361439 LRIT1Q9P2V4 623 aa13.5□□□□□ -0.25
NSMCE1-201ENST00000361439 FAM8A1Q9UBU6 413 aa13.5□□□□□ -0.25
NSMCE1-201ENST00000361439 PSMD13Q9UNM6 376 aa13.5□□□□□ -0.25
NSMCE1-201ENST00000361439 MTO1Q9Y2Z2 717 aaKnown RBP13.5□□□□□ -0.25
NSMCE1-201ENST00000361439 PCNX2A6NKB5 2137 aa13.49□□□□□ -0.25
NSMCE1-201ENST00000361439 CCDC189A1A4V9 331 aa13.49□□□□□ -0.25
NSMCE1-201ENST00000361439 KRT37O76014 449 aa13.49□□□□□ -0.25
NSMCE1-201ENST00000361439 DKK1O94907 266 aa13.49□□□□□ -0.25
NSMCE1-201ENST00000361439 F7P08709 466 aaPredicted RBP13.49□□□□□ -0.25
NSMCE1-201ENST00000361439 STMN1P16949 149 aa13.49□□□□□ -0.25
NSMCE1-201ENST00000361439 ACADVLP49748 655 aa13.49□□□□□ -0.25
NSMCE1-201ENST00000361439 MAZP56270 477 aaKnown RBP13.49□□□□□ -0.25
NSMCE1-201ENST00000361439 RAB10P61026 200 aa13.49□□□□□ -0.25
NSMCE1-201ENST00000361439 GPLD1P80108 840 aa13.49□□□□□ -0.25
NSMCE1-201ENST00000361439 SQSTM1Q13501 440 aa13.49□□□□□ -0.25
NSMCE1-201ENST00000361439 PUM1Q14671 1186 aaKnown RBP eCLIP13.49□□□□□ -0.25
NSMCE1-201ENST00000361439 USP10Q14694 798 aaKnown RBP13.49□□□□□ -0.25
NSMCE1-201ENST00000361439 UAP1Q16222 522 aaPredicted RBP13.49□□□□□ -0.25
NSMCE1-201ENST00000361439 UBAP2Q5T6F2 1119 aaKnown RBP13.49□□□□□ -0.25
NSMCE1-201ENST00000361439 TMEM26Q6ZUK4 368 aa13.49□□□□□ -0.25
NSMCE1-201ENST00000361439 TDRPQ86YL5 185 aa13.49□□□□□ -0.25
NSMCE1-201ENST00000361439 FBXO15Q8NCQ5 510 aaPredicted RBP13.49□□□□□ -0.25
NSMCE1-201ENST00000361439 PHC3Q8NDX5 983 aa13.49□□□□□ -0.25
NSMCE1-201ENST00000361439 DEFB124Q8NES8 71 aa13.49□□□□□ -0.25
NSMCE1-201ENST00000361439 SPDYE1Q8NFV5 336 aaPredicted RBP13.49□□□□□ -0.25
NSMCE1-201ENST00000361439 IFI44Q8TCB0 444 aa13.49□□□□□ -0.25
NSMCE1-201ENST00000361439 PATE1Q8WXA2 126 aa13.49□□□□□ -0.25
NSMCE1-201ENST00000361439 ISL2Q96A47 359 aa13.49□□□□□ -0.25
NSMCE1-201ENST00000361439 ATXN7L3BQ96GX2 97 aa13.49□□□□□ -0.25
NSMCE1-201ENST00000361439 OLFM1Q99784 485 aa13.49□□□□□ -0.25
NSMCE1-201ENST00000361439 DPYSL5Q9BPU6 564 aa13.49□□□□□ -0.25
NSMCE1-201ENST00000361439 TRIT1Q9H3H1 467 aaKnown RBP13.49□□□□□ -0.25
NSMCE1-201ENST00000361439 KIR3DX1Q9H7L2 352 aa13.49□□□□□ -0.25
NSMCE1-201ENST00000361439 IMP3Q9NV31 184 aaKnown RBP13.49□□□□□ -0.25
NSMCE1-201ENST00000361439 PSMC3IPQ9P2W1 217 aaPredicted RBP13.49□□□□□ -0.25
NSMCE1-201ENST00000361439 GALPQ9UBC7 116 aa13.49□□□□□ -0.25
NSMCE1-201ENST00000361439 SLC39A10Q9ULF5 831 aa13.49□□□□□ -0.25
NSMCE1-201ENST00000361439 ASF1AQ9Y294 204 aa13.49□□□□□ -0.25
NSMCE1-201ENST00000361439 RNF215Q9Y6U7 377 aa13.49□□□□□ -0.25
NSMCE1-201ENST00000361439 CFAP54Q96N23 3096 aa13.48□□□□□ -0.25
NSMCE1-201ENST00000361439 DMXL1Q9Y485 3027 aa13.48□□□□□ -0.25
NSMCE1-201ENST00000361439 FAM221BA6H8Z2 402 aa13.48□□□□□ -0.25
NSMCE1-201ENST00000361439 PPM1DO15297 605 aa13.48□□□□□ -0.25
NSMCE1-201ENST00000361439 SLC16A5O15375 505 aa13.48□□□□□ -0.25
NSMCE1-201ENST00000361439 RFPL3O75679 317 aa13.48□□□□□ -0.25
NSMCE1-201ENST00000361439 KCNK5O95279 499 aa13.48□□□□□ -0.25
NSMCE1-201ENST00000361439 SNRPAP09012 282 aaKnown RBP13.48□□□□□ -0.25
NSMCE1-201ENST00000361439 ZNF37AP17032 561 aaPredicted RBP13.48□□□□□ -0.25
NSMCE1-201ENST00000361439 ABCG1P45844 678 aa13.48□□□□□ -0.25
NSMCE1-201ENST00000361439 TAS2R39P59534 338 aa13.48□□□□□ -0.25
NSMCE1-201ENST00000361439 SP140Q13342 867 aa13.48□□□□□ -0.25
NSMCE1-201ENST00000361439 KRT33BQ14525 404 aa13.48□□□□□ -0.25
NSMCE1-201ENST00000361439 NAA30Q147X3 362 aaPredicted RBP13.48□□□□□ -0.25
NSMCE1-201ENST00000361439 ACSBG2Q5FVE4 666 aa13.48□□□□□ -0.25
NSMCE1-201ENST00000361439 GUSBP11Q6P575 273 aa13.48□□□□□ -0.25
NSMCE1-201ENST00000361439 TTC23LQ6PF05 361 aa13.48□□□□□ -0.25
NSMCE1-201ENST00000361439 KLHL35Q6PF15 583 aa13.48□□□□□ -0.25
NSMCE1-201ENST00000361439 PAQR3Q6TCH7 311 aa13.48□□□□□ -0.25
NSMCE1-201ENST00000361439 EFL1Q7Z2Z2 1120 aaKnown RBP13.48□□□□□ -0.25
NSMCE1-201ENST00000361439 VRK3Q8IV63 474 aa13.48□□□□□ -0.25
NSMCE1-201ENST00000361439 DCUN1D3Q8IWE4 304 aa13.48□□□□□ -0.25
NSMCE1-201ENST00000361439 ACVR1CQ8NER5 493 aa13.48□□□□□ -0.25
NSMCE1-201ENST00000361439 DCAKDQ8WVC6 231 aa13.48□□□□□ -0.25
NSMCE1-201ENST00000361439 ASB11Q8WXH4 323 aa13.48□□□□□ -0.25
NSMCE1-201ENST00000361439 FAM136AQ96C01 138 aa13.48□□□□□ -0.25
NSMCE1-201ENST00000361439 SLC38A3Q99624 504 aa13.48□□□□□ -0.25
NSMCE1-201ENST00000361439 SLC30A3Q99726 388 aa13.48□□□□□ -0.25
NSMCE1-201ENST00000361439 ROPN1BQ9BZX4 212 aaPredicted RBP13.48□□□□□ -0.25
NSMCE1-201ENST00000361439 TFB2MQ9H5Q4 396 aaKnown RBP13.48□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms