RNA–Protein interactions for RNA: ENST00000360264.7

CUX1-203, Transcript of cut like homeobox 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CUX1, Length 13,762 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX1-203ENST00000360264 RGS8P57771 180 aaPredicted RBP9.54□□□□□ -0.88
CUX1-203ENST00000360264 GLYATQ6IB77 296 aa9.54□□□□□ -0.88
CUX1-203ENST00000360264 SPAG16Q8N0X2 631 aa9.54□□□□□ -0.88
CUX1-203ENST00000360264 MARK4Q96L34 752 aa9.54□□□□□ -0.88
CUX1-203ENST00000360264 CCDC115Q96NT0 180 aa9.54□□□□□ -0.88
CUX1-203ENST00000360264 IFT52Q9Y366 437 aa9.54□□□□□ -0.88
CUX1-203ENST00000360264 COL6A6A6NMZ7 2263 aa9.54□□□□□ -0.88
CUX1-203ENST00000360264 SCN3AQ9NY46 2000 aa9.54□□□□□ -0.88
CUX1-203ENST00000360264 FAM240BA0A1B0GVZ2 78 aa9.54□□□□□ -0.88
CUX1-203ENST00000360264 PTP4A2Q12974 167 aa9.54□□□□□ -0.88
CUX1-203ENST00000360264 EIF2S3LQ2VIR3 472 aaKnown RBP9.54□□□□□ -0.88
CUX1-203ENST00000360264 CFAP206Q8IYR0 622 aa9.54□□□□□ -0.88
CUX1-203ENST00000360264 GRPEL2Q8TAA5 225 aa9.54□□□□□ -0.88
CUX1-203ENST00000360264 RCN3Q96D15 328 aa9.54□□□□□ -0.88
CUX1-203ENST00000360264 MRPL45Q9BRJ2 306 aaKnown RBP9.54□□□□□ -0.88
CUX1-203ENST00000360264 CRTAC1Q9NQ79 661 aa9.54□□□□□ -0.88
CUX1-203ENST00000360264 SDHAF3Q9NRP4 125 aa9.54□□□□□ -0.88
CUX1-203ENST00000360264 COQ9O75208 318 aa9.54□□□□□ -0.88
CUX1-203ENST00000360264 PRAMEF1O95521 474 aa9.54□□□□□ -0.88
CUX1-203ENST00000360264 PEPDP12955 493 aa9.54□□□□□ -0.88
CUX1-203ENST00000360264 GJA1P17302 382 aa9.54□□□□□ -0.88
CUX1-203ENST00000360264 MMP8P22894 467 aa9.54□□□□□ -0.88
CUX1-203ENST00000360264 PDHA2P29803 388 aa9.54□□□□□ -0.88
CUX1-203ENST00000360264 FLT3LGP49771 235 aa9.54□□□□□ -0.88
CUX1-203ENST00000360264 FMO1Q01740 532 aa9.54□□□□□ -0.88
CUX1-203ENST00000360264 TIGD2Q4W5G0 525 aa9.54□□□□□ -0.88
CUX1-203ENST00000360264 SPIN4Q56A73 249 aa9.54□□□□□ -0.88
CUX1-203ENST00000360264 VANGL1Q8TAA9 524 aaPredicted RBP9.54□□□□□ -0.88
CUX1-203ENST00000360264 NR4A3Q92570 626 aa9.54□□□□□ -0.88
CUX1-203ENST00000360264 CYP2S1Q96SQ9 504 aa9.54□□□□□ -0.88
CUX1-203ENST00000360264 GPR21Q99679 349 aa9.54□□□□□ -0.88
CUX1-203ENST00000360264 WRAP53Q9BUR4 548 aaKnown RBP9.54□□□□□ -0.88
CUX1-203ENST00000360264 ZSCAN5DPP0CG00 497 aa9.54□□□□□ -0.88
CUX1-203ENST00000360264 TATDN1Q6P1N9 297 aa9.54□□□□□ -0.88
CUX1-203ENST00000360264 MYO7BQ6PIF6 2116 aa9.54□□□□□ -0.88
CUX1-203ENST00000360264 SDR16C5Q8N3Y7 309 aa9.54□□□□□ -0.88
CUX1-203ENST00000360264 ENY2Q9NPA8 101 aa9.54□□□□□ -0.88
CUX1-203ENST00000360264 PRH1P02810 166 aa9.54□□□□□ -0.88
CUX1-203ENST00000360264 ANPEPP15144 967 aa9.54□□□□□ -0.88
CUX1-203ENST00000360264 TLR1Q15399 786 aa9.54□□□□□ -0.88
CUX1-203ENST00000360264 SLC29A4Q7RTT9 530 aa9.54□□□□□ -0.88
CUX1-203ENST00000360264 B3GAT2Q9NPZ5 323 aa9.54□□□□□ -0.88
CUX1-203ENST00000360264 ARL5CA6NH57 179 aa9.54□□□□□ -0.88
CUX1-203ENST00000360264 HSD11B1P28845 292 aa9.54□□□□□ -0.88
CUX1-203ENST00000360264 KCTD15Q96SI1 283 aaPredicted RBP9.54□□□□□ -0.88
CUX1-203ENST00000360264 LGMNQ99538 433 aa9.54□□□□□ -0.88
CUX1-203ENST00000360264 TBL1XR1Q9BZK7 514 aa9.54□□□□□ -0.88
CUX1-203ENST00000360264 CDT1Q9H211 546 aa9.54□□□□□ -0.88
CUX1-203ENST00000360264 SSU72Q9NP77 194 aaKnown RBP9.54□□□□□ -0.88
CUX1-203ENST00000360264 EQTNQ9NQ60 294 aa9.54□□□□□ -0.88
CUX1-203ENST00000360264 ZNF451Q9Y4E5 1061 aa9.54□□□□□ -0.88
CUX1-203ENST00000360264 AP2A2O94973 939 aa9.54□□□□□ -0.88
CUX1-203ENST00000360264 KLK3P07288 261 aaPredicted RBP9.54□□□□□ -0.88
CUX1-203ENST00000360264 CRADDP78560 199 aa9.54□□□□□ -0.88
CUX1-203ENST00000360264 RAB2BQ8WUD1 216 aa9.54□□□□□ -0.88
CUX1-203ENST00000360264 DHRS1Q96LJ7 313 aa9.54□□□□□ -0.88
CUX1-203ENST00000360264 PPM1MQ96MI6 270 aa9.54□□□□□ -0.88
CUX1-203ENST00000360264 OSER1Q9NX31 292 aa9.54□□□□□ -0.88
CUX1-203ENST00000360264 OR1I1O60431 355 aa9.53□□□□□ -0.88
CUX1-203ENST00000360264 TRMUO75648 421 aaKnown RBP9.53□□□□□ -0.88
CUX1-203ENST00000360264 PDYNP01213 254 aa9.53□□□□□ -0.88
CUX1-203ENST00000360264 TACR2P21452 398 aa9.53□□□□□ -0.88
CUX1-203ENST00000360264 GRHL2Q6ISB3 625 aa9.53□□□□□ -0.88
CUX1-203ENST00000360264 TNS4Q8IZW8 715 aa9.53□□□□□ -0.88
CUX1-203ENST00000360264 NCSTNQ92542 709 aa9.53□□□□□ -0.88
CUX1-203ENST00000360264 TP53INP1Q96A56 240 aa9.53□□□□□ -0.88
CUX1-203ENST00000360264 DLG5Q8TDM6 1919 aa9.53□□□□□ -0.88
CUX1-203ENST00000360264 ATF6P18850 670 aa9.53□□□□□ -0.88
CUX1-203ENST00000360264 FOXM1Q08050 763 aa9.53□□□□□ -0.88
CUX1-203ENST00000360264 DLG2Q15700 870 aa9.53□□□□□ -0.88
CUX1-203ENST00000360264 PQLC1Q8N2U9 271 aa9.53□□□□□ -0.88
CUX1-203ENST00000360264 OTUB2Q96DC9 234 aa9.53□□□□□ -0.88
CUX1-203ENST00000360264 UNC93B1Q9H1C4 597 aa9.53□□□□□ -0.88
CUX1-203ENST00000360264 IRAK2O43187 625 aa9.53□□□□□ -0.88
CUX1-203ENST00000360264 KRT36O76013 467 aa9.53□□□□□ -0.88
CUX1-203ENST00000360264 BPNT1O95861 308 aa9.53□□□□□ -0.88
CUX1-203ENST00000360264 ZBTB48P10074 688 aaPredicted RBP9.53□□□□□ -0.88
CUX1-203ENST00000360264 CLCN4P51793 760 aa9.53□□□□□ -0.88
CUX1-203ENST00000360264 ZSCAN4Q8NAM6 433 aaPredicted RBP9.53□□□□□ -0.88
CUX1-203ENST00000360264 INO80EQ8NBZ0 244 aaPredicted RBP9.53□□□□□ -0.88
CUX1-203ENST00000360264 TCEAL3Q969E4 200 aa9.53□□□□□ -0.88
CUX1-203ENST00000360264 RGMAQ96B86 450 aa9.53□□□□□ -0.88
CUX1-203ENST00000360264 EXOC2Q96KP1 924 aa9.53□□□□□ -0.88
CUX1-203ENST00000360264 CD320Q9NPF0 282 aa9.53□□□□□ -0.88
CUX1-203ENST00000360264 TBC1D24Q9ULP9 559 aa9.53□□□□□ -0.88
CUX1-203ENST00000360264 CLEC3AO75596 197 aa9.53□□□□□ -0.88
CUX1-203ENST00000360264 LINGO3P0C6S8 592 aa9.53□□□□□ -0.88
CUX1-203ENST00000360264 MAPK10P53779 464 aa9.53□□□□□ -0.88
CUX1-203ENST00000360264 MFSD5Q6N075 450 aa9.53□□□□□ -0.88
CUX1-203ENST00000360264 C8orf48Q96LL4 319 aa9.53□□□□□ -0.88
CUX1-203ENST00000360264 NPAS2Q99743 824 aa9.53□□□□□ -0.88
CUX1-203ENST00000360264 PRELID2Q8N945 189 aa9.53□□□□□ -0.88
CUX1-203ENST00000360264 C1orf109Q9NX04 203 aa9.53□□□□□ -0.88
CUX1-203ENST00000360264 RPL36Q9Y3U8 105 aaKnown RBP9.53□□□□□ -0.88
CUX1-203ENST00000360264 MAP2K7O14733 419 aa9.53□□□□□ -0.88
CUX1-203ENST00000360264 RB1P06400 928 aa9.53□□□□□ -0.88
CUX1-203ENST00000360264 HOXA10P31260 410 aaPredicted RBP9.53□□□□□ -0.88
CUX1-203ENST00000360264 TTMPQ5BVD1 217 aa9.53□□□□□ -0.88
CUX1-203ENST00000360264 GALNTL5Q7Z4T8 443 aa9.53□□□□□ -0.88
CUX1-203ENST00000360264 RBM23Q86U06 439 aaKnown RBP9.53□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms