RNA–Protein interactions for RNA: ENST00000358901.10

VCP-201, Transcript of valosin containing protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VCP, Length 4,370 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCP-201ENST00000358901 TBX1O43435 398 aa13.5□□□□□ -0.25
VCP-201ENST00000358901 CLIC3O95833 236 aa13.5□□□□□ -0.25
VCP-201ENST00000358901 ZNF12P17014 697 aa13.5□□□□□ -0.25
VCP-201ENST00000358901 FMO3P31513 532 aa13.5□□□□□ -0.25
VCP-201ENST00000358901 CTNNB1P35222 781 aa13.5□□□□□ -0.25
VCP-201ENST00000358901 CASP9P55211 416 aa13.5□□□□□ -0.25
VCP-201ENST00000358901 SRSF11Q05519 484 aaKnown RBP13.5□□□□□ -0.25
VCP-201ENST00000358901 SH3D19Q5HYK7 790 aa13.5□□□□□ -0.25
VCP-201ENST00000358901 SLC2A7Q6PXP3 512 aa13.5□□□□□ -0.25
VCP-201ENST00000358901 CLDN19Q8N6F1 224 aa13.5□□□□□ -0.25
VCP-201ENST00000358901 TXNDC5Q8NBS9 432 aaKnown RBP13.5□□□□□ -0.25
VCP-201ENST00000358901 OR8D1Q8WZ84 308 aa13.5□□□□□ -0.25
VCP-201ENST00000358901 TMBIM1Q969X1 311 aa13.5□□□□□ -0.25
VCP-201ENST00000358901 MIPEPQ99797 713 aa13.5□□□□□ -0.25
VCP-201ENST00000358901 C3orf14Q9HBI5 128 aa13.5□□□□□ -0.25
VCP-201ENST00000358901 ZNF222Q9UK12 451 aa13.5□□□□□ -0.25
VCP-201ENST00000358901 PCDHGA11Q9Y5H2 935 aa13.5□□□□□ -0.25
VCP-201ENST00000358901 NDUFB5O43674 189 aa13.5□□□□□ -0.25
VCP-201ENST00000358901 PRKAR1AP10644 381 aa13.5□□□□□ -0.25
VCP-201ENST00000358901 CTSEP14091 401 aa13.5□□□□□ -0.25
VCP-201ENST00000358901 GMPRP36959 345 aa13.5□□□□□ -0.25
VCP-201ENST00000358901 PGGT1BP53609 377 aa13.5□□□□□ -0.25
VCP-201ENST00000358901 DCST1Q5T197 706 aa13.5□□□□□ -0.25
VCP-201ENST00000358901 CXXC5Q7LFL8 322 aaKnown RBP13.5□□□□□ -0.25
VCP-201ENST00000358901 OR5K1Q8NHB7 308 aa13.5□□□□□ -0.25
VCP-201ENST00000358901 ADAMTS15Q8TE58 950 aa13.5□□□□□ -0.25
VCP-201ENST00000358901 WRAP53Q9BUR4 548 aaKnown RBP13.5□□□□□ -0.25
VCP-201ENST00000358901 KIFC1Q9BW19 673 aa13.5□□□□□ -0.25
VCP-201ENST00000358901 TXLNGYQ9BZA5 131 aa13.5□□□□□ -0.25
VCP-201ENST00000358901 ACTR3BQ9P1U1 418 aa13.5□□□□□ -0.25
VCP-201ENST00000358901 MAP10Q9P2G4 905 aa13.5□□□□□ -0.25
VCP-201ENST00000358901 SDK1Q7Z5N4 2213 aa13.5□□□□□ -0.25
VCP-201ENST00000358901 SNX4O95219 450 aa13.5□□□□□ -0.25
VCP-201ENST00000358901 GNAZP19086 355 aa13.5□□□□□ -0.25
VCP-201ENST00000358901 MAPK12P53778 367 aa13.5□□□□□ -0.25
VCP-201ENST00000358901 UFM1P61960 85 aa13.5□□□□□ -0.25
VCP-201ENST00000358901 PTPRCAPQ14761 206 aa13.5□□□□□ -0.25
VCP-201ENST00000358901 SPRYD7Q5W111 196 aa13.5□□□□□ -0.25
VCP-201ENST00000358901 KCNA7Q96RP8 456 aa13.5□□□□□ -0.25
VCP-201ENST00000358901 MAT2BQ9NZL9 334 aa13.5□□□□□ -0.25
VCP-201ENST00000358901 RUVBL1Q9Y265 456 aaKnown RBP13.5□□□□□ -0.25
VCP-201ENST00000358901 TELO2Q9Y4R8 837 aa13.5□□□□□ -0.25
VCP-201ENST00000358901 SAGE2PA6NJ88 616 aa13.49□□□□□ -0.25
VCP-201ENST00000358901 SLC38A8A6NNN8 435 aa13.49□□□□□ -0.25
VCP-201ENST00000358901 POP4O95707 220 aaKnown RBP13.49□□□□□ -0.25
VCP-201ENST00000358901 GLUD1P00367 558 aa13.49□□□□□ -0.25
VCP-201ENST00000358901 CDH1P12830 882 aa13.49□□□□□ -0.25
VCP-201ENST00000358901 ZNF730Q6ZMV8 503 aa13.49□□□□□ -0.25
VCP-201ENST00000358901 PACRGLQ8N7B6 248 aa13.49□□□□□ -0.25
VCP-201ENST00000358901 KLHL32Q96NJ5 620 aa13.49□□□□□ -0.25
VCP-201ENST00000358901 NKIRAS2Q9NYR9 191 aa13.49□□□□□ -0.25
VCP-201ENST00000358901 MAP1BP46821 2468 aaKnown RBP13.49□□□□□ -0.25
VCP-201ENST00000358901 ZNF99A8MXY4 864 aaPredicted RBP13.49□□□□□ -0.25
VCP-201ENST00000358901 PER2O15055 1255 aa13.49□□□□□ -0.25
VCP-201ENST00000358901 ERN1O75460 977 aaKnown RBP13.49□□□□□ -0.25
VCP-201ENST00000358901 OR5F1O95221 314 aa13.49□□□□□ -0.25
VCP-201ENST00000358901 KCNE1P15382 129 aa13.49□□□□□ -0.25
VCP-201ENST00000358901 WNT7BP56706 349 aa13.49□□□□□ -0.25
VCP-201ENST00000358901 SF1Q15637 639 aaKnown RBP13.49□□□□□ -0.25
VCP-201ENST00000358901 ZFP69Q49AA0 526 aa13.49□□□□□ -0.25
VCP-201ENST00000358901 FBXO22Q8NEZ5 403 aa13.49□□□□□ -0.25
VCP-201ENST00000358901 EEF1AKMT1Q8WVE0 214 aa13.49□□□□□ -0.25
VCP-201ENST00000358901 A0A1W2PP18 115 aa13.49□□□□□ -0.25
VCP-201ENST00000358901 CARNS1A5YM72 827 aa13.49□□□□□ -0.25
VCP-201ENST00000358901 J3QRK9 145 aa13.49□□□□□ -0.25
VCP-201ENST00000358901 RGS20O76081 388 aa13.49□□□□□ -0.25
VCP-201ENST00000358901 KCNQ1P51787 676 aa13.49□□□□□ -0.25
VCP-201ENST00000358901 SLC10A2Q12908 348 aaPredicted RBP13.49□□□□□ -0.25
VCP-201ENST00000358901 CBX3Q13185 183 aa13.49□□□□□ -0.25
VCP-201ENST00000358901 CCL14Q16627 93 aa13.49□□□□□ -0.25
VCP-201ENST00000358901 IFI44LQ53G44 452 aa13.49□□□□□ -0.25
VCP-201ENST00000358901 RAB6CQ53S08 254 aa13.49□□□□□ -0.25
VCP-201ENST00000358901 XKR5Q6UX68 686 aa13.49□□□□□ -0.25
VCP-201ENST00000358901 ERMP1Q7Z2K6 904 aa13.49□□□□□ -0.25
VCP-201ENST00000358901 CYP2U1Q7Z449 544 aa13.49□□□□□ -0.25
VCP-201ENST00000358901 ZSCAN2Q7Z7L9 614 aaPredicted RBP13.49□□□□□ -0.25
VCP-201ENST00000358901 ZNF655Q8N720 491 aaPredicted RBP13.49□□□□□ -0.25
VCP-201ENST00000358901 SLC43A3Q8NBI5 491 aa13.49□□□□□ -0.25
VCP-201ENST00000358901 OR10G6Q8NH81 332 aa13.49□□□□□ -0.25
VCP-201ENST00000358901 TOP1MTQ969P6 601 aa13.49□□□□□ -0.25
VCP-201ENST00000358901 FBXL8Q96CD0 374 aa13.49□□□□□ -0.25
VCP-201ENST00000358901 DUSP26Q9BV47 211 aa13.49□□□□□ -0.25
VCP-201ENST00000358901 RAB6CQ9H0N0 254 aa13.49□□□□□ -0.25
VCP-201ENST00000358901 LMAN2LQ9H0V9 348 aa13.49□□□□□ -0.25
VCP-201ENST00000358901 CCSER2Q9H7U1 834 aa13.49□□□□□ -0.25
VCP-201ENST00000358901 EXD2Q9NVH0 621 aa13.49□□□□□ -0.25
VCP-201ENST00000358901 FAM72CH0Y354 149 aa13.48□□□□□ -0.25
VCP-201ENST00000358901 ZW10O43264 779 aa13.48□□□□□ -0.25
VCP-201ENST00000358901 ALPIP09923 528 aa13.48□□□□□ -0.25
VCP-201ENST00000358901 VARSP26640 1264 aaKnown RBP13.48□□□□□ -0.25
VCP-201ENST00000358901 GDF5P43026 501 aa13.48□□□□□ -0.25
VCP-201ENST00000358901 TEAD4Q15561 434 aa13.48□□□□□ -0.25
VCP-201ENST00000358901 FAM72AQ5TYM5 149 aa13.48□□□□□ -0.25
VCP-201ENST00000358901 FAM46CQ5VWP2 391 aa13.48□□□□□ -0.25
VCP-201ENST00000358901 FAM72DQ6L9T8 149 aa13.48□□□□□ -0.25
VCP-201ENST00000358901 FAM72BQ86X60 149 aa13.48□□□□□ -0.25
VCP-201ENST00000358901 NLGN2Q8NFZ4 835 aa13.48□□□□□ -0.25
VCP-201ENST00000358901 CRYGNQ8WXF5 182 aa13.48□□□□□ -0.25
VCP-201ENST00000358901 TAMM41Q96BW9 452 aa13.48□□□□□ -0.25
VCP-201ENST00000358901 FCRL3Q96P31 734 aaPredicted RBP13.48□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms