RNA–Protein interactions for RNA: ENST00000358894.10

COL20A1-201, Transcript of collagen type XX alpha 1 chain, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene COL20A1, Length 4,172 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL20A1-201ENST00000358894 NOGQ13253 232 aa12.05□□□□□ -0.48
COL20A1-201ENST00000358894 C6orf136Q5SQH8 315 aa12.05□□□□□ -0.48
COL20A1-201ENST00000358894 KLHL35Q6PF15 583 aa12.05□□□□□ -0.48
COL20A1-201ENST00000358894 THAP5Q7Z6K1 395 aa12.05□□□□□ -0.48
COL20A1-201ENST00000358894 MARVELD2Q8N4S9 558 aa12.05□□□□□ -0.48
COL20A1-201ENST00000358894 TAMM41Q96BW9 452 aa12.05□□□□□ -0.48
COL20A1-201ENST00000358894 C3orf30Q96M34 536 aa12.05□□□□□ -0.48
COL20A1-201ENST00000358894 ASAH2Q9NR71 780 aa12.05□□□□□ -0.48
COL20A1-201ENST00000358894 HTR3EA5X5Y0 456 aa12.05□□□□□ -0.48
COL20A1-201ENST00000358894 I6L893 689 aaPredicted RBP12.05□□□□□ -0.48
COL20A1-201ENST00000358894 TNFRSF21O75509 655 aa12.05□□□□□ -0.48
COL20A1-201ENST00000358894 NADKO95544 446 aaPredicted RBP12.05□□□□□ -0.48
COL20A1-201ENST00000358894 INHAP05111 366 aa12.05□□□□□ -0.48
COL20A1-201ENST00000358894 MYCLP1P12525 358 aaPredicted RBP12.05□□□□□ -0.48
COL20A1-201ENST00000358894 ZNF24P17028 368 aa12.05□□□□□ -0.48
COL20A1-201ENST00000358894 CAPN3P20807 821 aa12.05□□□□□ -0.48
COL20A1-201ENST00000358894 MAGEA11P43364 429 aa12.05□□□□□ -0.48
COL20A1-201ENST00000358894 LAPTM5Q13571 262 aa12.05□□□□□ -0.48
COL20A1-201ENST00000358894 GK3PQ14409 553 aa12.05□□□□□ -0.48
COL20A1-201ENST00000358894 PTGR1Q14914 329 aa12.05□□□□□ -0.48
COL20A1-201ENST00000358894 CHRNA6Q15825 494 aa12.05□□□□□ -0.48
COL20A1-201ENST00000358894 NELL1Q92832 810 aa12.05□□□□□ -0.48
COL20A1-201ENST00000358894 MARCH7Q9H992 704 aa12.05□□□□□ -0.48
COL20A1-201ENST00000358894 INTS7Q9NVH2 962 aaKnown RBP12.05□□□□□ -0.48
COL20A1-201ENST00000358894 NLE1Q9NVX2 485 aaPredicted RBP12.05□□□□□ -0.48
COL20A1-201ENST00000358894 OSER1Q9NX31 292 aa12.05□□□□□ -0.48
COL20A1-201ENST00000358894 USE1Q9NZ43 259 aa12.05□□□□□ -0.48
COL20A1-201ENST00000358894 YIPF1Q9Y548 306 aa12.05□□□□□ -0.48
COL20A1-201ENST00000358894 SSC5DA1L4H1 1573 aa12.05□□□□□ -0.48
COL20A1-201ENST00000358894 COCHO43405 550 aa12.04□□□□□ -0.48
COL20A1-201ENST00000358894 CYP2A6P11509 494 aaPredicted RBP12.04□□□□□ -0.48
COL20A1-201ENST00000358894 FDXRP22570 491 aa12.04□□□□□ -0.48
COL20A1-201ENST00000358894 PGFP49763 221 aa12.04□□□□□ -0.48
COL20A1-201ENST00000358894 TUBB3Q13509 450 aa12.04□□□□□ -0.48
COL20A1-201ENST00000358894 NAE1Q13564 534 aa12.04□□□□□ -0.48
COL20A1-201ENST00000358894 OGFOD2Q6N063 350 aa12.04□□□□□ -0.48
COL20A1-201ENST00000358894 ERAP2Q6P179 960 aa12.04□□□□□ -0.48
COL20A1-201ENST00000358894 NSMCE3Q96MG7 304 aa12.04□□□□□ -0.48
COL20A1-201ENST00000358894 FOCADQ5VW36 1801 aa12.04□□□□□ -0.48
COL20A1-201ENST00000358894 NME4O00746 187 aa12.04□□□□□ -0.48
COL20A1-201ENST00000358894 TFECO14948 347 aaPredicted RBP12.04□□□□□ -0.48
COL20A1-201ENST00000358894 GPR39O43194 453 aa12.04□□□□□ -0.48
COL20A1-201ENST00000358894 WBP4O75554 376 aaKnown RBP12.04□□□□□ -0.48
COL20A1-201ENST00000358894 EIF2S1P05198 315 aaKnown RBP12.04□□□□□ -0.48
COL20A1-201ENST00000358894 PORP16435 677 aaPredicted RBP12.04□□□□□ -0.48
COL20A1-201ENST00000358894 ST13P50502 369 aaKnown RBP12.04□□□□□ -0.48
COL20A1-201ENST00000358894 CYP4F3Q08477 520 aa12.04□□□□□ -0.48
COL20A1-201ENST00000358894 CHIT1Q13231 466 aa12.04□□□□□ -0.48
COL20A1-201ENST00000358894 MYLK3Q32MK0 819 aa12.04□□□□□ -0.48
COL20A1-201ENST00000358894 HSF5Q4G112 596 aaPredicted RBP12.04□□□□□ -0.48
COL20A1-201ENST00000358894 DENND5AQ6IQ26 1287 aa12.04□□□□□ -0.48
COL20A1-201ENST00000358894 GOLGA7Q7Z5G4 137 aa12.04□□□□□ -0.48
COL20A1-201ENST00000358894 MRPL10Q7Z7H8 261 aaKnown RBP12.04□□□□□ -0.48
COL20A1-201ENST00000358894 PHC3Q8NDX5 983 aa12.04□□□□□ -0.48
COL20A1-201ENST00000358894 BIRC7Q96CA5 298 aa12.04□□□□□ -0.48
COL20A1-201ENST00000358894 MTERF1Q99551 399 aaKnown RBP12.04□□□□□ -0.48
COL20A1-201ENST00000358894 SLC29A1Q99808 456 aa12.04□□□□□ -0.48
COL20A1-201ENST00000358894 KATNBL1Q9H079 304 aa12.04□□□□□ -0.48
COL20A1-201ENST00000358894 MUC13Q9H3R2 512 aa12.04□□□□□ -0.48
COL20A1-201ENST00000358894 C1orf109Q9NX04 203 aa12.04□□□□□ -0.48
COL20A1-201ENST00000358894 GMPR2Q9P2T1 348 aaKnown RBP12.04□□□□□ -0.48
COL20A1-201ENST00000358894 POLR2AP24928 1970 aaKnown RBP12.04□□□□□ -0.48
COL20A1-201ENST00000358894 hCG_2039718K7EN88 272 aa12.04□□□□□ -0.48
COL20A1-201ENST00000358894 K7EPI3 171 aa12.04□□□□□ -0.48
COL20A1-201ENST00000358894 CXCR6O00574 342 aa12.04□□□□□ -0.48
COL20A1-201ENST00000358894 SNPHO15079 494 aa12.04□□□□□ -0.48
COL20A1-201ENST00000358894 LDB2O43679 373 aa12.04□□□□□ -0.48
COL20A1-201ENST00000358894 KDELR3O43731 214 aa12.04□□□□□ -0.48
COL20A1-201ENST00000358894 COL6A1P12109 1028 aa12.04□□□□□ -0.48
COL20A1-201ENST00000358894 EEFSECP57772 596 aaKnown RBP12.04□□□□□ -0.48
COL20A1-201ENST00000358894 RPS14P62263 151 aaKnown RBP12.04□□□□□ -0.48
COL20A1-201ENST00000358894 XKR4Q5GH76 650 aa12.04□□□□□ -0.48
COL20A1-201ENST00000358894 SPANXN4Q5MJ08 99 aa12.04□□□□□ -0.48
COL20A1-201ENST00000358894 LYPLAL1Q5VWZ2 237 aa12.04□□□□□ -0.48
COL20A1-201ENST00000358894 SULT1C3Q6IMI6 304 aa12.04□□□□□ -0.48
COL20A1-201ENST00000358894 NANOGP8Q6NSW7 305 aa12.04□□□□□ -0.48
COL20A1-201ENST00000358894 C17orf99Q6UX52 265 aa12.04□□□□□ -0.48
COL20A1-201ENST00000358894 GATAD2AQ86YP4 633 aa12.04□□□□□ -0.48
COL20A1-201ENST00000358894 FNDC8Q8TC99 324 aa12.04□□□□□ -0.48
COL20A1-201ENST00000358894 TDRD1Q9BXT4 1180 aaKnown RBP12.04□□□□□ -0.48
COL20A1-201ENST00000358894 NANOGQ9H9S0 305 aa12.04□□□□□ -0.48
COL20A1-201ENST00000358894 TRPC4Q9UBN4 977 aa12.04□□□□□ -0.48
COL20A1-201ENST00000358894 FBXO9Q9UK97 447 aaPredicted RBP12.04□□□□□ -0.48
COL20A1-201ENST00000358894 DUSP12Q9UNI6 340 aa12.04□□□□□ -0.48
COL20A1-201ENST00000358894 HHLA1C9JL84 531 aa12.04□□□□□ -0.48
COL20A1-201ENST00000358894 OAZ2O95190 189 aa12.04□□□□□ -0.48
COL20A1-201ENST00000358894 PRDX3P30048 256 aaKnown RBP12.04□□□□□ -0.48
COL20A1-201ENST00000358894 HNF4AP41235 474 aa12.04□□□□□ -0.48
COL20A1-201ENST00000358894 CDKL1Q00532 357 aa12.04□□□□□ -0.48
COL20A1-201ENST00000358894 FGD3Q5JSP0 725 aa12.04□□□□□ -0.48
COL20A1-201ENST00000358894 CLLU1OSQ5K130 101 aa12.04□□□□□ -0.48
COL20A1-201ENST00000358894 ELMSAN1Q6PJG2 1045 aa12.04□□□□□ -0.48
COL20A1-201ENST00000358894 ERI1Q8IV48 349 aaKnown RBP12.04□□□□□ -0.48
COL20A1-201ENST00000358894 TMBIM1Q969X1 311 aa12.04□□□□□ -0.48
COL20A1-201ENST00000358894 SMAD5Q99717 465 aaKnown RBP12.04□□□□□ -0.48
COL20A1-201ENST00000358894 HCSTQ9UBK5 93 aa12.04□□□□□ -0.48
COL20A1-201ENST00000358894 TMCC3Q9ULS5 477 aa12.04□□□□□ -0.48
COL20A1-201ENST00000358894 KIF13BQ9NQT8 1826 aa12.04□□□□□ -0.48
COL20A1-201ENST00000358894 A0A1W2PPW3 197 aa12.03□□□□□ -0.48
COL20A1-201ENST00000358894 LOC730098B7Z3J9 87 aa12.03□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms