RNA–Protein interactions for RNA: ENST00000357980.8

TPM1-205, Transcript of tropomyosin 1, humanhuman

TSL 2 BASIC

Gene TPM1, Length 1,800 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-205ENST00000357980 DNMT3AQ9Y6K1 912 aaPredicted RBP16.68■□□□□ 0.26
TPM1-205ENST00000357980 ARHGEF33A8MVX0 844 aa16.68■□□□□ 0.26
TPM1-205ENST00000357980 SLCO1B7G3V0H7 640 aa16.68■□□□□ 0.26
TPM1-205ENST00000357980 H3BM21 787 aa16.68■□□□□ 0.26
TPM1-205ENST00000357980 IGHV4-34P06331 123 aa16.68■□□□□ 0.26
TPM1-205ENST00000357980 OXTRP30559 389 aa16.68■□□□□ 0.26
TPM1-205ENST00000357980 MAPK9P45984 424 aa16.68■□□□□ 0.26
TPM1-205ENST00000357980 CCR5P51681 352 aa16.68■□□□□ 0.26
TPM1-205ENST00000357980 CLDN2P57739 230 aa16.68■□□□□ 0.26
TPM1-205ENST00000357980 DMTNQ08495 405 aa16.68■□□□□ 0.26
TPM1-205ENST00000357980 AMZ2Q86W34 360 aa16.68■□□□□ 0.26
TPM1-205ENST00000357980 FITM2Q8N6M3 262 aa16.68■□□□□ 0.26
TPM1-205ENST00000357980 SKA1Q96BD8 255 aa16.68■□□□□ 0.26
TPM1-205ENST00000357980 SCARF2Q96GP6 870 aaPredicted RBP16.68■□□□□ 0.26
TPM1-205ENST00000357980 EGFL8Q99944 293 aa16.68■□□□□ 0.26
TPM1-205ENST00000357980 TM7SF3Q9NS93 570 aa16.68■□□□□ 0.26
TPM1-205ENST00000357980 ARL15Q9NXU5 204 aa16.68■□□□□ 0.26
TPM1-205ENST00000357980 WSB2Q9NYS7 404 aaPredicted RBP16.68■□□□□ 0.26
TPM1-205ENST00000357980 VTI1BQ9UEU0 232 aa16.68■□□□□ 0.26
TPM1-205ENST00000357980 CACNB4O00305 520 aaPredicted RBP16.67■□□□□ 0.26
TPM1-205ENST00000357980 KMOO15229 486 aa16.67■□□□□ 0.26
TPM1-205ENST00000357980 DCTN3O75935 186 aa16.67■□□□□ 0.26
TPM1-205ENST00000357980 ANXA5P08758 320 aa16.67■□□□□ 0.26
TPM1-205ENST00000357980 CYP2A7P20853 494 aa16.67■□□□□ 0.26
TPM1-205ENST00000357980 RPS9P46781 194 aaKnown RBP16.67■□□□□ 0.26
TPM1-205ENST00000357980 IDH3AP50213 366 aa16.67■□□□□ 0.26
TPM1-205ENST00000357980 CCR3P51677 355 aa16.67■□□□□ 0.26
TPM1-205ENST00000357980 AP1S2P56377 157 aa16.67■□□□□ 0.26
TPM1-205ENST00000357980 KIAA1024LP59773 190 aa16.67■□□□□ 0.26
TPM1-205ENST00000357980 ABRQ12979 859 aa16.67■□□□□ 0.26
TPM1-205ENST00000357980 RPA4Q13156 261 aa16.67■□□□□ 0.26
TPM1-205ENST00000357980 TUBB3Q13509 450 aa16.67■□□□□ 0.26
TPM1-205ENST00000357980 EEF1AKMT2Q5JPI9 291 aaKnown RBP16.67■□□□□ 0.26
TPM1-205ENST00000357980 VWA5B1Q5TIE3 1220 aa16.67■□□□□ 0.26
TPM1-205ENST00000357980 METTL2BQ6P1Q9 378 aaKnown RBP16.67■□□□□ 0.26
TPM1-205ENST00000357980 EPGNQ6UW88 154 aa16.67■□□□□ 0.26
TPM1-205ENST00000357980 SPEM1Q8N4L4 309 aa16.67■□□□□ 0.26
TPM1-205ENST00000357980 TMEM145Q8NBT3 493 aa16.67■□□□□ 0.26
TPM1-205ENST00000357980 TRPC4APQ8TEL6 797 aa16.67■□□□□ 0.26
TPM1-205ENST00000357980 AGAP11Q8TF27 550 aa16.67■□□□□ 0.26
TPM1-205ENST00000357980 BMFQ96LC9 184 aa16.67■□□□□ 0.26
TPM1-205ENST00000357980 TRIM54Q9BYV2 358 aa16.67■□□□□ 0.26
TPM1-205ENST00000357980 OR52A5Q9H2C5 316 aa16.67■□□□□ 0.26
TPM1-205ENST00000357980 RMI1Q9H9A7 625 aa16.67■□□□□ 0.26
TPM1-205ENST00000357980 SEMA4BQ9NPR2 832 aaPredicted RBP16.67■□□□□ 0.26
TPM1-205ENST00000357980 HEY2Q9UBP5 337 aa16.67■□□□□ 0.26
TPM1-205ENST00000357980 CA5BQ9Y2D0 317 aa16.67■□□□□ 0.26
TPM1-205ENST00000357980 PLXND1Q9Y4D7 1925 aa16.67■□□□□ 0.26
TPM1-205ENST00000357980 ATXN2Q99700 1313 aaKnown RBP16.67■□□□□ 0.26
TPM1-205ENST00000357980 A0A1B0GTL3 188 aa16.66■□□□□ 0.26
TPM1-205ENST00000357980 KLHL33A6NCF5 533 aa16.66■□□□□ 0.26
TPM1-205ENST00000357980 H0Y8X5 98 aa16.66■□□□□ 0.26
TPM1-205ENST00000357980 FPGTO14772 594 aa16.66■□□□□ 0.26
TPM1-205ENST00000357980 ZNF217O75362 1048 aa16.66■□□□□ 0.26
TPM1-205ENST00000357980 APBB3O95704 486 aa16.66■□□□□ 0.26
TPM1-205ENST00000357980 MLYCDO95822 493 aa16.66■□□□□ 0.26
TPM1-205ENST00000357980 JUNP05412 331 aaKnown RBP16.66■□□□□ 0.26
TPM1-205ENST00000357980 SERPINB3P29508 390 aa16.66■□□□□ 0.26
TPM1-205ENST00000357980 CD6P30203 668 aa16.66■□□□□ 0.26
TPM1-205ENST00000357980 GGT5P36269 586 aa16.66■□□□□ 0.26
TPM1-205ENST00000357980 HSPA7P48741 367 aa16.66■□□□□ 0.26
TPM1-205ENST00000357980 PFN3P60673 137 aa16.66■□□□□ 0.26
TPM1-205ENST00000357980 ZXDCQ2QGD7 858 aaPredicted RBP16.66■□□□□ 0.26
TPM1-205ENST00000357980 KIAA0895LQ68EN5 471 aa16.66■□□□□ 0.26
TPM1-205ENST00000357980 GCNT7Q6ZNI0 430 aa16.66■□□□□ 0.26
TPM1-205ENST00000357980 KIRREL3Q8IZU9 778 aa16.66■□□□□ 0.26
TPM1-205ENST00000357980 MCOLN3Q8TDD5 553 aa16.66■□□□□ 0.26
TPM1-205ENST00000357980 STON2Q8WXE9 905 aa16.66■□□□□ 0.26
TPM1-205ENST00000357980 LRRC37BQ96QE4 947 aa16.66■□□□□ 0.26
TPM1-205ENST00000357980 CD244Q9BZW8 370 aa16.66■□□□□ 0.26
TPM1-205ENST00000357980 MID1IP1Q9NPA3 183 aa16.66■□□□□ 0.26
TPM1-205ENST00000357980 CD320Q9NPF0 282 aa16.66■□□□□ 0.26
TPM1-205ENST00000357980 WWOXQ9NZC7 414 aa16.66■□□□□ 0.26
TPM1-205ENST00000357980 ZNHIT2Q9UHR6 403 aa16.66■□□□□ 0.26
TPM1-205ENST00000357980 LRP4O75096 1905 aa16.66■□□□□ 0.26
TPM1-205ENST00000357980 IGHV1OR15-9A0A0B4J2B8 117 aa16.66■□□□□ 0.26
TPM1-205ENST00000357980 KRT87PA6NCN2 255 aa16.66■□□□□ 0.26
TPM1-205ENST00000357980 HGSO14964 777 aaPredicted RBP16.66■□□□□ 0.26
TPM1-205ENST00000357980 FGF4P08620 206 aa16.66■□□□□ 0.26
TPM1-205ENST00000357980 ACADLP28330 430 aa16.66■□□□□ 0.26
TPM1-205ENST00000357980 AKT2P31751 481 aa16.66■□□□□ 0.26
TPM1-205ENST00000357980 HNMTP50135 292 aa16.66■□□□□ 0.26
TPM1-205ENST00000357980 DMPKQ09013 629 aa16.66■□□□□ 0.26
TPM1-205ENST00000357980 METRNLQ641Q3 311 aa16.66■□□□□ 0.26
TPM1-205ENST00000357980 YTHDF3Q7Z739 585 aaKnown RBP16.66■□□□□ 0.26
TPM1-205ENST00000357980 MTDHQ86UE4 582 aaKnown RBP16.66■□□□□ 0.26
TPM1-205ENST00000357980 ALYREFQ86V81 257 aaKnown RBP16.66■□□□□ 0.26
TPM1-205ENST00000357980 TCAIMQ8N3R3 496 aa16.66■□□□□ 0.26
TPM1-205ENST00000357980 FRMD1Q8N878 549 aa16.66■□□□□ 0.26
TPM1-205ENST00000357980 CFAP61Q8NHU2 1237 aa16.66■□□□□ 0.26
TPM1-205ENST00000357980 FAR2Q96K12 515 aa16.66■□□□□ 0.26
TPM1-205ENST00000357980 ZNF382Q96SR6 550 aa16.66■□□□□ 0.26
TPM1-205ENST00000357980 HGH1Q9BTY7 390 aa16.66■□□□□ 0.26
TPM1-205ENST00000357980 TPSD1Q9BZJ3 242 aa16.66■□□□□ 0.26
TPM1-205ENST00000357980 FGF22Q9HCT0 170 aa16.66■□□□□ 0.26
TPM1-205ENST00000357980 ZNF225Q9UK10 706 aa16.66■□□□□ 0.26
TPM1-205ENST00000357980 TRAF6Q9Y4K3 522 aa16.66■□□□□ 0.26
TPM1-205ENST00000357980 CATP04040 527 aaKnown RBP16.65■□□□□ 0.26
TPM1-205ENST00000357980 HIST1H2AGP0C0S8 130 aaPredicted RBP16.65■□□□□ 0.26
TPM1-205ENST00000357980 HIST1H2ADP20671 130 aa16.65■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms