RNA–Protein interactions for RNA: ENST00000357896.7

IFT20-202, Transcript of intraflagellar transport 20, humanhuman

TSL 1 (best) BASIC

Gene IFT20, Length 974 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT20-202ENST00000357896 CCM2Q9BSQ5 444 aa15.35■□□□□ 0.05
IFT20-202ENST00000357896 EPS8L2Q9H6S3 715 aa15.35■□□□□ 0.05
IFT20-202ENST00000357896 UGT1A7Q9HAW7 530 aa15.35■□□□□ 0.05
IFT20-202ENST00000357896 UGT1A10Q9HAW8 530 aa15.35■□□□□ 0.05
IFT20-202ENST00000357896 UGT1A8Q9HAW9 530 aa15.35■□□□□ 0.05
IFT20-202ENST00000357896 OLAHQ9NV23 265 aa15.35■□□□□ 0.05
IFT20-202ENST00000357896 SUCOQ9UBS9 1254 aaKnown RBP15.35■□□□□ 0.05
IFT20-202ENST00000357896 SPTBP11277 2137 aa15.35■□□□□ 0.05
IFT20-202ENST00000357896 GLYATL1P3A0A0U1RQE8 302 aa15.34■□□□□ 0.05
IFT20-202ENST00000357896 JRKO75564 520 aa15.34■□□□□ 0.05
IFT20-202ENST00000357896 AKT1P31749 480 aa15.34■□□□□ 0.05
IFT20-202ENST00000357896 OTUD4Q01804 1114 aaKnown RBP15.34■□□□□ 0.05
IFT20-202ENST00000357896 ZNF630Q2M218 657 aaPredicted RBP15.34■□□□□ 0.05
IFT20-202ENST00000357896 ATP13A4Q4VNC1 1196 aa15.34■□□□□ 0.05
IFT20-202ENST00000357896 VWA2Q5GFL6 755 aa15.34■□□□□ 0.05
IFT20-202ENST00000357896 C1orf189Q5VU69 101 aa15.34■□□□□ 0.05
IFT20-202ENST00000357896 PRAMEF13Q5VWM6 474 aa15.34■□□□□ 0.05
IFT20-202ENST00000357896 MTFR2Q6P444 385 aa15.34■□□□□ 0.05
IFT20-202ENST00000357896 FAM151BQ6UXP7 276 aa15.34■□□□□ 0.05
IFT20-202ENST00000357896 CDHR3Q6ZTQ4 885 aa15.34■□□□□ 0.05
IFT20-202ENST00000357896 PQLC3Q8N755 202 aa15.34■□□□□ 0.05
IFT20-202ENST00000357896 FAF2Q96CS3 445 aa15.34■□□□□ 0.05
IFT20-202ENST00000357896 CNDP1Q96KN2 507 aa15.34■□□□□ 0.05
IFT20-202ENST00000357896 CCDC168Q8NDH2 2452 aa15.34■□□□□ 0.05
IFT20-202ENST00000357896 MDC1Q14676 2089 aaKnown RBP15.33■□□□□ 0.04
IFT20-202ENST00000357896 C2orf74A8MZ97 194 aa15.33■□□□□ 0.04
IFT20-202ENST00000357896 MASP2O00187 686 aa15.33■□□□□ 0.04
IFT20-202ENST00000357896 UMODP07911 640 aa15.33■□□□□ 0.04
IFT20-202ENST00000357896 HTR1EP28566 365 aa15.33■□□□□ 0.04
IFT20-202ENST00000357896 TNNT3P45378 269 aaPredicted RBP15.33■□□□□ 0.04
IFT20-202ENST00000357896 MYL5Q02045 173 aa15.33■□□□□ 0.04
IFT20-202ENST00000357896 AP1B1Q10567 949 aa15.33■□□□□ 0.04
IFT20-202ENST00000357896 RPUSD3Q6P087 351 aaKnown RBP15.33■□□□□ 0.04
IFT20-202ENST00000357896 MRPL14Q6P1L8 145 aaKnown RBP15.33■□□□□ 0.04
IFT20-202ENST00000357896 BNC2Q6ZN30 1099 aaPredicted RBP15.33■□□□□ 0.04
IFT20-202ENST00000357896 HOOK3Q86VS8 718 aa15.33■□□□□ 0.04
IFT20-202ENST00000357896 CFAP206Q8IYR0 622 aa15.33■□□□□ 0.04
IFT20-202ENST00000357896 ITLN2Q8WWU7 325 aaPredicted RBP15.33■□□□□ 0.04
IFT20-202ENST00000357896 TBRG4Q969Z0 631 aaKnown RBP eCLIP15.33■□□□□ 0.04
IFT20-202ENST00000357896 RMDN2Q96LZ7 410 aa15.33■□□□□ 0.04
IFT20-202ENST00000357896 CEP41Q9BYV8 373 aa15.33■□□□□ 0.04
IFT20-202ENST00000357896 TFB2MQ9H5Q4 396 aaKnown RBP15.33■□□□□ 0.04
IFT20-202ENST00000357896 TXLNGQ9NUQ3 528 aa15.33■□□□□ 0.04
IFT20-202ENST00000357896 SMOXQ9NWM0 555 aa15.33■□□□□ 0.04
IFT20-202ENST00000357896 HACD3Q9P035 362 aa15.33■□□□□ 0.04
IFT20-202ENST00000357896 PKP3Q9Y446 797 aa15.33■□□□□ 0.04
IFT20-202ENST00000357896 BTN3A3O00478 584 aa15.32■□□□□ 0.04
IFT20-202ENST00000357896 PMPCBO75439 489 aa15.32■□□□□ 0.04
IFT20-202ENST00000357896 MT-CYBP00156 380 aaPredicted RBP15.32■□□□□ 0.04
IFT20-202ENST00000357896 POLBP06746 335 aa15.32■□□□□ 0.04
IFT20-202ENST00000357896 MMP11P24347 488 aa15.32■□□□□ 0.04
IFT20-202ENST00000357896 GJC1P36383 396 aa15.32■□□□□ 0.04
IFT20-202ENST00000357896 NKAIN1Q4KMZ8 207 aa15.32■□□□□ 0.04
IFT20-202ENST00000357896 SPNS3Q6ZMD2 512 aa15.32■□□□□ 0.04
IFT20-202ENST00000357896 DET1Q7L5Y6 550 aa15.32■□□□□ 0.04
IFT20-202ENST00000357896 APTXQ7Z2E3 356 aaKnown RBP15.32■□□□□ 0.04
IFT20-202ENST00000357896 MRGPRGQ86SM5 289 aa15.32■□□□□ 0.04
IFT20-202ENST00000357896 ZNF808Q8N4W9 903 aaPredicted RBP15.32■□□□□ 0.04
IFT20-202ENST00000357896 SPATA22Q8NHS9 363 aa15.32■□□□□ 0.04
IFT20-202ENST00000357896 CPLX3Q8WVH0 158 aa15.32■□□□□ 0.04
IFT20-202ENST00000357896 VPS50Q96JG6 964 aa15.32■□□□□ 0.04
IFT20-202ENST00000357896 LINC00615Q96LM1 132 aaPredicted RBP15.32■□□□□ 0.04
IFT20-202ENST00000357896 FERD3LQ96RJ6 166 aa15.32■□□□□ 0.04
IFT20-202ENST00000357896 KLHL25Q9H0H3 589 aa15.32■□□□□ 0.04
IFT20-202ENST00000357896 THAP2Q9H0W7 228 aa15.32■□□□□ 0.04
IFT20-202ENST00000357896 IL17CQ9P0M4 197 aa15.32■□□□□ 0.04
IFT20-202ENST00000357896 FAM8A1Q9UBU6 413 aa15.32■□□□□ 0.04
IFT20-202ENST00000357896 FBXL4Q9UKA2 621 aa15.32■□□□□ 0.04
IFT20-202ENST00000357896 CDYLQ9Y232 598 aa15.32■□□□□ 0.04
IFT20-202ENST00000357896 HEY1Q9Y5J3 304 aa15.32■□□□□ 0.04
IFT20-202ENST00000357896 MTORP42345 2549 aa15.32■□□□□ 0.04
IFT20-202ENST00000357896 BTN3A1O00481 513 aa15.31■□□□□ 0.04
IFT20-202ENST00000357896 ZSCAN9O15535 394 aaPredicted RBP15.31■□□□□ 0.04
IFT20-202ENST00000357896 GPR39O43194 453 aa15.31■□□□□ 0.04
IFT20-202ENST00000357896 EPOP01588 193 aa15.31■□□□□ 0.04
IFT20-202ENST00000357896 SNRPB2P08579 225 aaKnown RBP15.31■□□□□ 0.04
IFT20-202ENST00000357896 ATXN8OSP0DMR3 200 aa15.31■□□□□ 0.04
IFT20-202ENST00000357896 PVRP15151 417 aa15.31■□□□□ 0.04
IFT20-202ENST00000357896 CAPN3P20807 821 aa15.31■□□□□ 0.04
IFT20-202ENST00000357896 PDK1Q15118 436 aa15.31■□□□□ 0.04
IFT20-202ENST00000357896 PRKD1Q15139 912 aaPredicted RBP15.31■□□□□ 0.04
IFT20-202ENST00000357896 BCL7AQ4VC05 210 aa15.31■□□□□ 0.04
IFT20-202ENST00000357896 TLDC1Q6P9B6 456 aa15.31■□□□□ 0.04
IFT20-202ENST00000357896 RPTNQ6XPR3 784 aa15.31■□□□□ 0.04
IFT20-202ENST00000357896 AMIGO1Q86WK6 493 aa15.31■□□□□ 0.04
IFT20-202ENST00000357896 ZNF398Q8TD17 642 aa15.31■□□□□ 0.04
IFT20-202ENST00000357896 RNF157Q96PX1 679 aa15.31■□□□□ 0.04
IFT20-202ENST00000357896 CHRNA10Q9GZZ6 450 aa15.31■□□□□ 0.04
IFT20-202ENST00000357896 LHPPQ9H008 270 aa15.31■□□□□ 0.04
IFT20-202ENST00000357896 SPRTNQ9H040 489 aaPredicted RBP15.31■□□□□ 0.04
IFT20-202ENST00000357896 GLOD4Q9HC38 313 aa15.31■□□□□ 0.04
IFT20-202ENST00000357896 SLC6A20Q9NP91 592 aa15.31■□□□□ 0.04
IFT20-202ENST00000357896 CDC23Q9UJX2 597 aa15.31■□□□□ 0.04
IFT20-202ENST00000357896 A0A0A6YYK5 440 aaPredicted RBP15.3■□□□□ 0.04
IFT20-202ENST00000357896 LOC285095A0A1B0GVY8 99 aa15.3■□□□□ 0.04
IFT20-202ENST00000357896 H3BMH7 237 aa15.3■□□□□ 0.04
IFT20-202ENST00000357896 IFRD1O00458 451 aaPredicted RBP15.3■□□□□ 0.04
IFT20-202ENST00000357896 PCDH17O14917 1159 aa15.3■□□□□ 0.04
IFT20-202ENST00000357896 PPP1R12AO14974 1030 aaPredicted RBP15.3■□□□□ 0.04
IFT20-202ENST00000357896 CNOT3O75175 753 aaKnown RBP15.3■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms