RNA–Protein interactions for RNA: ENST00000357568.7

CAPN3-205, Transcript of calpain 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CAPN3, Length 2,669 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-205ENST00000357568 ZNF544Q6NX49 715 aa10.47□□□□□ -0.73
CAPN3-205ENST00000357568 NOTUMQ6P988 496 aa10.47□□□□□ -0.73
CAPN3-205ENST00000357568 PAGE2Q7Z2X7 111 aa10.47□□□□□ -0.73
CAPN3-205ENST00000357568 GPR149Q86SP6 731 aa10.47□□□□□ -0.73
CAPN3-205ENST00000357568 GALNT6Q8NCL4 622 aa10.47□□□□□ -0.73
CAPN3-205ENST00000357568 OR2T12Q8NG77 320 aa10.47□□□□□ -0.73
CAPN3-205ENST00000357568 OR7G1Q8NGA0 311 aa10.47□□□□□ -0.73
CAPN3-205ENST00000357568 OR56A4Q8NGH8 313 aa10.47□□□□□ -0.73
CAPN3-205ENST00000357568 PSMA8Q8TAA3 256 aa10.47□□□□□ -0.73
CAPN3-205ENST00000357568 CAPSLQ8WWF8 208 aa10.47□□□□□ -0.73
CAPN3-205ENST00000357568 SLC38A4Q969I6 547 aa10.47□□□□□ -0.73
CAPN3-205ENST00000357568 ZHX1-C8orf76Q96EF9 292 aa10.47□□□□□ -0.73
CAPN3-205ENST00000357568 CELF6Q96J87 481 aaKnown RBP10.47□□□□□ -0.73
CAPN3-205ENST00000357568 AGAP4Q96P64 663 aa10.47□□□□□ -0.73
CAPN3-205ENST00000357568 APOL4Q9BPW4 351 aa10.47□□□□□ -0.73
CAPN3-205ENST00000357568 ACOT13Q9NPJ3 140 aa10.47□□□□□ -0.73
CAPN3-205ENST00000357568 NOD1Q9Y239 953 aa10.47□□□□□ -0.73
CAPN3-205ENST00000357568 RBMX2Q9Y388 322 aaKnown RBP10.47□□□□□ -0.73
CAPN3-205ENST00000357568 ANKRD36A6QL64 1941 aa10.47□□□□□ -0.73
CAPN3-205ENST00000357568 LCHNA4D1U4 455 aa10.47□□□□□ -0.73
CAPN3-205ENST00000357568 OR2A25A4D2G3 310 aa10.47□□□□□ -0.73
CAPN3-205ENST00000357568 DFFAO00273 331 aa10.47□□□□□ -0.73
CAPN3-205ENST00000357568 IDH3BO43837 385 aa10.47□□□□□ -0.73
CAPN3-205ENST00000357568 PMPCBO75439 489 aa10.47□□□□□ -0.73
CAPN3-205ENST00000357568 BEST1O76090 585 aa10.47□□□□□ -0.73
CAPN3-205ENST00000357568 RECQL5O94762 991 aaPredicted RBP10.47□□□□□ -0.73
CAPN3-205ENST00000357568 SIX3O95343 332 aaPredicted RBP10.47□□□□□ -0.73
CAPN3-205ENST00000357568 KRT8P05787 483 aa10.47□□□□□ -0.73
CAPN3-205ENST00000357568 SLC2A3P11169 496 aa10.47□□□□□ -0.73
CAPN3-205ENST00000357568 CD9P21926 228 aa10.47□□□□□ -0.73
CAPN3-205ENST00000357568 HOXA11P31270 313 aaPredicted RBP10.47□□□□□ -0.73
CAPN3-205ENST00000357568 TGFBR2P37173 567 aa10.47□□□□□ -0.73
CAPN3-205ENST00000357568 CHRNA4P43681 627 aa10.47□□□□□ -0.73
CAPN3-205ENST00000357568 VBP1P61758 197 aa10.47□□□□□ -0.73
CAPN3-205ENST00000357568 TIAL1Q01085 375 aaKnown RBP eCLIP10.47□□□□□ -0.73
CAPN3-205ENST00000357568 TRAF3Q13114 568 aa10.47□□□□□ -0.73
CAPN3-205ENST00000357568 EIF4EBP2Q13542 120 aaPredicted RBP10.47□□□□□ -0.73
CAPN3-205ENST00000357568 TOR1AIP1Q5JTV8 583 aa10.47□□□□□ -0.73
CAPN3-205ENST00000357568 C6orf136Q5SQH8 315 aa10.47□□□□□ -0.73
CAPN3-205ENST00000357568 VARS2Q5ST30 1063 aaKnown RBP10.47□□□□□ -0.73
CAPN3-205ENST00000357568 STEAP3Q658P3 488 aa10.47□□□□□ -0.73
CAPN3-205ENST00000357568 MRNIPQ6NTE8 343 aa10.47□□□□□ -0.73
CAPN3-205ENST00000357568 USP43Q70EL4 1123 aa10.47□□□□□ -0.73
CAPN3-205ENST00000357568 VASH1Q7L8A9 365 aaPredicted RBP10.47□□□□□ -0.73
CAPN3-205ENST00000357568 BHLHA9Q7RTU4 235 aa10.47□□□□□ -0.73
CAPN3-205ENST00000357568 B3GNT8Q7Z7M8 397 aa10.47□□□□□ -0.73
CAPN3-205ENST00000357568 POC5Q8NA72 575 aa10.47□□□□□ -0.73
CAPN3-205ENST00000357568 TADA1Q96BN2 335 aa10.47□□□□□ -0.73
CAPN3-205ENST00000357568 ZNF419Q96HQ0 510 aaPredicted RBP10.47□□□□□ -0.73
CAPN3-205ENST00000357568 ZNF382Q96SR6 550 aa10.47□□□□□ -0.73
CAPN3-205ENST00000357568 AARSD1Q9BTE6 412 aaKnown RBP10.47□□□□□ -0.73
CAPN3-205ENST00000357568 CCDC90BQ9GZT6 254 aa10.47□□□□□ -0.73
CAPN3-205ENST00000357568 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP10.47□□□□□ -0.73
CAPN3-205ENST00000357568 RABL2AQ9UBK7 228 aaPredicted RBP10.47□□□□□ -0.73
CAPN3-205ENST00000357568 OPTCQ9UBM4 332 aa10.47□□□□□ -0.73
CAPN3-205ENST00000357568 MKLN1Q9UL63 735 aa10.47□□□□□ -0.73
CAPN3-205ENST00000357568 NEUROG3Q9Y4Z2 214 aa10.47□□□□□ -0.73
CAPN3-205ENST00000357568 TIMM22Q9Y584 194 aa10.47□□□□□ -0.73
CAPN3-205ENST00000357568 TRIP12Q14669 1992 aaPredicted RBP10.46□□□□□ -0.73
CAPN3-205ENST00000357568 PNMA8CA0A1B0GUJ8 204 aa10.46□□□□□ -0.73
CAPN3-205ENST00000357568 EFCAB9A8MZ26 197 aa10.46□□□□□ -0.73
CAPN3-205ENST00000357568 FAM220BPB1ANY3 271 aa10.46□□□□□ -0.73
CAPN3-205ENST00000357568 C9JVG2 144 aa10.46□□□□□ -0.73
CAPN3-205ENST00000357568 PITPNM1O00562 1244 aa10.46□□□□□ -0.73
CAPN3-205ENST00000357568 GNGT2O14610 69 aa10.46□□□□□ -0.73
CAPN3-205ENST00000357568 KIAA0355O15063 1070 aa10.46□□□□□ -0.73
CAPN3-205ENST00000357568 GSTA4O15217 222 aa10.46□□□□□ -0.73
CAPN3-205ENST00000357568 CD3EAPO15446 510 aaKnown RBP10.46□□□□□ -0.73
CAPN3-205ENST00000357568 HS6ST1O60243 411 aa10.46□□□□□ -0.73
CAPN3-205ENST00000357568 VTNP04004 478 aa10.46□□□□□ -0.73
CAPN3-205ENST00000357568 CLTBP09497 229 aa10.46□□□□□ -0.73
CAPN3-205ENST00000357568 MYCLP1P12525 358 aaPredicted RBP10.46□□□□□ -0.73
CAPN3-205ENST00000357568 PCSK2P16519 638 aa10.46□□□□□ -0.73
CAPN3-205ENST00000357568 MAGEA2P43356 314 aa10.46□□□□□ -0.73
CAPN3-205ENST00000357568 MASP1P48740 699 aa10.46□□□□□ -0.73
CAPN3-205ENST00000357568 ATN1P54259 1190 aaPredicted RBP10.46□□□□□ -0.73
CAPN3-205ENST00000357568 TLE2Q04725 743 aa10.46□□□□□ -0.73
CAPN3-205ENST00000357568 TYSND1Q2T9J0 566 aa10.46□□□□□ -0.73
CAPN3-205ENST00000357568 ATP6AP1LQ52LC2 224 aa10.46□□□□□ -0.73
CAPN3-205ENST00000357568 CATSPEREQ5SY80 951 aa10.46□□□□□ -0.73
CAPN3-205ENST00000357568 TMEM236Q5W0B7 351 aa10.46□□□□□ -0.73
CAPN3-205ENST00000357568 AMER2Q8N7J2 671 aa10.46□□□□□ -0.73
CAPN3-205ENST00000357568 SETD6Q8TBK2 473 aa10.46□□□□□ -0.73
CAPN3-205ENST00000357568 RHBDF1Q96CC6 855 aa10.46□□□□□ -0.73
CAPN3-205ENST00000357568 PDLIM5Q96HC4 596 aaKnown RBP10.46□□□□□ -0.73
CAPN3-205ENST00000357568 KCNA7Q96RP8 456 aa10.46□□□□□ -0.73
CAPN3-205ENST00000357568 EMILIN2Q9BXX0 1053 aa10.46□□□□□ -0.73
CAPN3-205ENST00000357568 TRIM8Q9BZR9 551 aa10.46□□□□□ -0.73
CAPN3-205ENST00000357568 SMOC2Q9H3U7 446 aa10.46□□□□□ -0.73
CAPN3-205ENST00000357568 TRMT13Q9NUP7 481 aaKnown RBP10.46□□□□□ -0.73
CAPN3-205ENST00000357568 SLAMF8Q9P0V8 285 aa10.46□□□□□ -0.73
CAPN3-205ENST00000357568 ERVK-18Q9QC07 812 aa10.46□□□□□ -0.73
CAPN3-205ENST00000357568 RAPGEFL1Q9UHV5 662 aa10.46□□□□□ -0.73
CAPN3-205ENST00000357568 USP22Q9UPT9 525 aa10.46□□□□□ -0.73
CAPN3-205ENST00000357568 PTGES3LE9PB15 166 aa10.46□□□□□ -0.74
CAPN3-205ENST00000357568 E9PQ18 207 aa10.46□□□□□ -0.74
CAPN3-205ENST00000357568 PPP6CO00743 305 aa10.46□□□□□ -0.74
CAPN3-205ENST00000357568 RAD51BO15315 384 aa10.46□□□□□ -0.74
CAPN3-205ENST00000357568 RECQL4O94761 1208 aa10.46□□□□□ -0.74
CAPN3-205ENST00000357568 APOA1P02647 267 aa10.46□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms