RNA–Protein interactions for RNA: ENST00000357409.9

VPS13A-202, Transcript of vacuolar protein sorting 13 homolog A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VPS13A, Length 9,967 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13A-202ENST00000357409 LPGAT1Q92604 370 aa7.24□□□□□ -1.25
VPS13A-202ENST00000357409 HSFY1Q96LI6 401 aa7.24□□□□□ -1.25
VPS13A-202ENST00000357409 OR51B5Q9H339 312 aa7.24□□□□□ -1.25
VPS13A-202ENST00000357409 DNAJC27Q9NZQ0 273 aa7.24□□□□□ -1.25
VPS13A-202ENST00000357409 COMMD9Q9P000 198 aa7.24□□□□□ -1.25
VPS13A-202ENST00000357409 CYP3A7-CYP3A51PA0A087WV96 503 aa7.24□□□□□ -1.25
VPS13A-202ENST00000357409 PIP5K1BO14986 540 aa7.24□□□□□ -1.25
VPS13A-202ENST00000357409 WARSP23381 471 aaKnown RBP7.24□□□□□ -1.25
VPS13A-202ENST00000357409 CYP3A7P24462 503 aa7.24□□□□□ -1.25
VPS13A-202ENST00000357409 ASMTP46597 345 aa7.24□□□□□ -1.25
VPS13A-202ENST00000357409 VEGFBP49765 207 aa7.24□□□□□ -1.25
VPS13A-202ENST00000357409 HNMTP50135 292 aa7.24□□□□□ -1.25
VPS13A-202ENST00000357409 NCBP2P52298 156 aaKnown RBP eCLIP7.24□□□□□ -1.253e-12■■□□□ 13
VPS13A-202ENST00000357409 CDK16Q00536 496 aa7.24□□□□□ -1.25
VPS13A-202ENST00000357409 LGALS3BPQ08380 585 aa7.24□□□□□ -1.25
VPS13A-202ENST00000357409 NDUFA9Q16795 377 aa7.24□□□□□ -1.25
VPS13A-202ENST00000357409 NEK5Q6P3R8 708 aa7.24□□□□□ -1.25
VPS13A-202ENST00000357409 ZNF781Q8N8C0 355 aa7.24□□□□□ -1.25
VPS13A-202ENST00000357409 ZFP28Q8NHY6 868 aa7.24□□□□□ -1.25
VPS13A-202ENST00000357409 SCAMP4Q969E2 229 aa7.24□□□□□ -1.25
VPS13A-202ENST00000357409 SLC39A3Q9BRY0 314 aa7.24□□□□□ -1.25
VPS13A-202ENST00000357409 AZIN1O14977 448 aa7.24□□□□□ -1.25
VPS13A-202ENST00000357409 SCO2O43819 266 aa7.24□□□□□ -1.25
VPS13A-202ENST00000357409 POP7O75817 140 aaKnown RBP7.24□□□□□ -1.25
VPS13A-202ENST00000357409 MYL9P24844 172 aa7.24□□□□□ -1.25
VPS13A-202ENST00000357409 OR1E2P47887 323 aa7.24□□□□□ -1.25
VPS13A-202ENST00000357409 BCAP31P51572 246 aa7.24□□□□□ -1.25
VPS13A-202ENST00000357409 PPIDQ08752 370 aaKnown RBP7.24□□□□□ -1.25
VPS13A-202ENST00000357409 STK11Q15831 433 aa7.24□□□□□ -1.25
VPS13A-202ENST00000357409 TPRG1Q6ZUI0 275 aa7.24□□□□□ -1.25
VPS13A-202ENST00000357409 ZNF627Q7L945 461 aa7.24□□□□□ -1.25
VPS13A-202ENST00000357409 LYSMD3Q7Z3D4 306 aa7.24□□□□□ -1.25
VPS13A-202ENST00000357409 DGLUCYQ7Z3D6 616 aa7.24□□□□□ -1.25
VPS13A-202ENST00000357409 CDH24Q86UP0 819 aa7.24□□□□□ -1.25
VPS13A-202ENST00000357409 PJA1Q8NG27 643 aa7.24□□□□□ -1.25
VPS13A-202ENST00000357409 MRPL48Q96GC5 212 aaKnown RBP7.24□□□□□ -1.25
VPS13A-202ENST00000357409 ASB2Q96Q27 587 aa7.24□□□□□ -1.25
VPS13A-202ENST00000357409 C2orf78A6NCI8 922 aa7.24□□□□□ -1.25
VPS13A-202ENST00000357409 E7EQ34 232 aa7.24□□□□□ -1.25
VPS13A-202ENST00000357409 BMP6P22004 513 aa7.24□□□□□ -1.25
VPS13A-202ENST00000357409 GTF2H2Q13888 395 aa7.24□□□□□ -1.25
VPS13A-202ENST00000357409 LTC4SQ16873 150 aa7.24□□□□□ -1.25
VPS13A-202ENST00000357409 GTF2H2CQ6P1K8 395 aa7.24□□□□□ -1.25
VPS13A-202ENST00000357409 PEX5LQ8IYB4 626 aa7.24□□□□□ -1.25
VPS13A-202ENST00000357409 CLEC4DQ8WXI8 215 aa7.24□□□□□ -1.25
VPS13A-202ENST00000357409 ITCHQ96J02 903 aa7.24□□□□□ -1.25
VPS13A-202ENST00000357409 FOXN4Q96NZ1 517 aa7.24□□□□□ -1.25
VPS13A-202ENST00000357409 HIST1H2AAQ96QV6 131 aa7.24□□□□□ -1.25
VPS13A-202ENST00000357409 CLEC4MQ9H2X3 399 aaPredicted RBP7.24□□□□□ -1.25
VPS13A-202ENST00000357409 NLGN3Q9NZ94 848 aa7.24□□□□□ -1.25
VPS13A-202ENST00000357409 CLUHO75153 1309 aa7.24□□□□□ -1.25
VPS13A-202ENST00000357409 ZNF878C9JN71 531 aa7.24□□□□□ -1.25
VPS13A-202ENST00000357409 FOXP2O15409 715 aa7.24□□□□□ -1.25
VPS13A-202ENST00000357409 SNX4O95219 450 aa7.24□□□□□ -1.25
VPS13A-202ENST00000357409 BCHEP06276 602 aa7.24□□□□□ -1.25
VPS13A-202ENST00000357409 PRKACGP22612 351 aa7.24□□□□□ -1.25
VPS13A-202ENST00000357409 GLDCP23378 1020 aa7.24□□□□□ -1.25
VPS13A-202ENST00000357409 IL12RB1P42701 662 aa7.24□□□□□ -1.25
VPS13A-202ENST00000357409 INO80DQ53TQ3 878 aaPredicted RBP7.24□□□□□ -1.25
VPS13A-202ENST00000357409 OR4F3Q6IEY1 312 aa7.24□□□□□ -1.25
VPS13A-202ENST00000357409 TMEM214Q6NUQ4 689 aaKnown RBP7.24□□□□□ -1.25
VPS13A-202ENST00000357409 KIAA1211LQ6NV74 962 aa7.24□□□□□ -1.25
VPS13A-202ENST00000357409 TRMT10BQ6PF06 316 aaKnown RBP7.24□□□□□ -1.25
VPS13A-202ENST00000357409 GALNT7Q86SF2 657 aa7.24□□□□□ -1.25
VPS13A-202ENST00000357409 RHBDD1Q8TEB9 315 aa7.24□□□□□ -1.25
VPS13A-202ENST00000357409 C11orf24Q96F05 449 aaPredicted RBP7.24□□□□□ -1.25
VPS13A-202ENST00000357409 RNF17Q9BXT8 1623 aaKnown RBP7.24□□□□□ -1.25
VPS13A-202ENST00000357409 RXFP1Q9HBX9 757 aa7.24□□□□□ -1.25
VPS13A-202ENST00000357409 ATRNL1Q5VV63 1379 aa7.23□□□□□ -1.25
VPS13A-202ENST00000357409 SLC33A1O00400 549 aaPredicted RBP7.23□□□□□ -1.25
VPS13A-202ENST00000357409 MGRN1O60291 552 aa7.23□□□□□ -1.25
VPS13A-202ENST00000357409 SERPINB7O75635 380 aa7.23□□□□□ -1.25
VPS13A-202ENST00000357409 RPP40O75818 363 aaKnown RBP7.23□□□□□ -1.25
VPS13A-202ENST00000357409 SOX14O95416 240 aa7.23□□□□□ -1.25
VPS13A-202ENST00000357409 CYP1A2P05177 515 aa7.23□□□□□ -1.25
VPS13A-202ENST00000357409 UQCRBP14927 111 aa7.23□□□□□ -1.25
VPS13A-202ENST00000357409 MYOGP15173 224 aa7.23□□□□□ -1.25
VPS13A-202ENST00000357409 GRK6P43250 576 aa7.23□□□□□ -1.25
VPS13A-202ENST00000357409 PSME3P61289 254 aa7.23□□□□□ -1.25
VPS13A-202ENST00000357409 CDKL1Q00532 357 aa7.23□□□□□ -1.25
VPS13A-202ENST00000357409 CREMQ03060 361 aa7.23□□□□□ -1.25
VPS13A-202ENST00000357409 ASB18Q6ZVZ8 466 aa7.23□□□□□ -1.25
VPS13A-202ENST00000357409 IL20RAQ9UHF4 553 aa7.23□□□□□ -1.25
VPS13A-202ENST00000357409 LOC730098B7Z3J9 87 aa7.23□□□□□ -1.25
VPS13A-202ENST00000357409 CAND1Q86VP6 1230 aaKnown RBP7.23□□□□□ -1.25
VPS13A-202ENST00000357409 HSPBAP1Q96EW2 488 aa7.23□□□□□ -1.25
VPS13A-202ENST00000357409 HIC2Q96JB3 615 aa7.23□□□□□ -1.25
VPS13A-202ENST00000357409 LIN28AQ9H9Z2 209 aaKnown RBP7.23□□□□□ -1.25
VPS13A-202ENST00000357409 HCFC1R1Q9NWW0 138 aa7.23□□□□□ -1.25
VPS13A-202ENST00000357409 TPRKBQ9Y3C4 175 aa7.23□□□□□ -1.25
VPS13A-202ENST00000357409 TSPAN4O14817 238 aa7.23□□□□□ -1.25
VPS13A-202ENST00000357409 SLC35G6P0C7Q6 338 aa7.23□□□□□ -1.25
VPS13A-202ENST00000357409 AGXTP21549 392 aa7.23□□□□□ -1.25
VPS13A-202ENST00000357409 CNTFP26441 200 aa7.23□□□□□ -1.25
VPS13A-202ENST00000357409 OR12D2P58182 307 aa7.23□□□□□ -1.25
VPS13A-202ENST00000357409 FRG1Q14331 258 aaKnown RBP7.23□□□□□ -1.25
VPS13A-202ENST00000357409 MEX3DQ86XN8 651 aaKnown RBP7.23□□□□□ -1.25
VPS13A-202ENST00000357409 CREG2Q8IUH2 290 aa7.23□□□□□ -1.25
VPS13A-202ENST00000357409 OR5T2Q8NGG2 359 aa7.23□□□□□ -1.25
VPS13A-202ENST00000357409 STYXQ8WUJ0 223 aa7.23□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 55.1 ms