RNA–Protein interactions for RNA: ENST00000357235.5

CDC42SE1-201, Transcript of CDC42 small effector 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDC42SE1, Length 3,045 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1-201ENST00000357235 LYPD8Q6UX82 237 aa8.11□□□□□ -1.11
CDC42SE1-201ENST00000357235 MILR1Q7Z6M3 343 aa8.11□□□□□ -1.11
CDC42SE1-201ENST00000357235 METTL23Q86XA0 190 aa8.11□□□□□ -1.11
CDC42SE1-201ENST00000357235 FAM109AQ8N4B1 249 aa8.11□□□□□ -1.11
CDC42SE1-201ENST00000357235 POC5Q8NA72 575 aa8.11□□□□□ -1.11
CDC42SE1-201ENST00000357235 OR2T11Q8NH01 316 aa8.11□□□□□ -1.11
CDC42SE1-201ENST00000357235 OR10A6Q8NH74 314 aa8.11□□□□□ -1.11
CDC42SE1-201ENST00000357235 IMP4Q96G21 291 aaKnown RBP8.11□□□□□ -1.11
CDC42SE1-201ENST00000357235 DACH2Q96NX9 599 aa8.11□□□□□ -1.11
CDC42SE1-201ENST00000357235 RPRD1AQ96P16 312 aaPredicted RBP8.11□□□□□ -1.11
CDC42SE1-201ENST00000357235 LRRC3Q9BY71 257 aa8.11□□□□□ -1.11
CDC42SE1-201ENST00000357235 MFSD1Q9H3U5 465 aa8.11□□□□□ -1.11
CDC42SE1-201ENST00000357235 NMUR1Q9HB89 426 aa8.11□□□□□ -1.11
CDC42SE1-201ENST00000357235 MRM3Q9HC36 420 aaKnown RBP8.11□□□□□ -1.11
CDC42SE1-201ENST00000357235 RPRD1BQ9NQG5 326 aaKnown RBP8.11□□□□□ -1.11
CDC42SE1-201ENST00000357235 HPS4Q9NQG7 708 aa8.11□□□□□ -1.11
CDC42SE1-201ENST00000357235 ABCB10Q9NRK6 738 aa8.11□□□□□ -1.11
CDC42SE1-201ENST00000357235 IKZF3Q9UKT9 509 aa8.11□□□□□ -1.11
CDC42SE1-201ENST00000357235 PDE10AQ9Y233 779 aa8.11□□□□□ -1.11
CDC42SE1-201ENST00000357235 LAMA3Q16787 3333 aa8.11□□□□□ -1.11
CDC42SE1-201ENST00000357235 SMIM35A0A1B0GVV1 85 aa8.11□□□□□ -1.11
CDC42SE1-201ENST00000357235 TCRBV5S2A0A599 114 aa8.11□□□□□ -1.11
CDC42SE1-201ENST00000357235 ERVH48-1M5A8F1 160 aa8.11□□□□□ -1.11
CDC42SE1-201ENST00000357235 LDB2O43679 373 aa8.11□□□□□ -1.11
CDC42SE1-201ENST00000357235 KCNJ13O60928 360 aa8.11□□□□□ -1.11
CDC42SE1-201ENST00000357235 GSTM1P09488 218 aa8.11□□□□□ -1.11
CDC42SE1-201ENST00000357235 G6PDP11413 515 aa8.11□□□□□ -1.11
CDC42SE1-201ENST00000357235 BMP4P12644 408 aa8.11□□□□□ -1.11
CDC42SE1-201ENST00000357235 FSHRP23945 695 aa8.11□□□□□ -1.11
CDC42SE1-201ENST00000357235 SERPINB10P48595 397 aa8.11□□□□□ -1.11
CDC42SE1-201ENST00000357235 CDKN1CP49918 316 aaPredicted RBP8.11□□□□□ -1.11
CDC42SE1-201ENST00000357235 ALDH3A2P51648 485 aa8.11□□□□□ -1.11
CDC42SE1-201ENST00000357235 DSTNP60981 165 aa8.11□□□□□ -1.11
CDC42SE1-201ENST00000357235 ADARB1P78563 741 aaKnown RBP8.11□□□□□ -1.11
CDC42SE1-201ENST00000357235 IL5RAQ01344 420 aa8.11□□□□□ -1.11
CDC42SE1-201ENST00000357235 DUSP7Q16829 419 aa8.11□□□□□ -1.11
CDC42SE1-201ENST00000357235 PTPRNQ16849 979 aa8.11□□□□□ -1.11
CDC42SE1-201ENST00000357235 RAP1GAP2Q684P5 730 aa8.11□□□□□ -1.11
CDC42SE1-201ENST00000357235 SPATA2LQ8IUW3 424 aaPredicted RBP8.11□□□□□ -1.11
CDC42SE1-201ENST00000357235 SCML4Q8N228 414 aa8.11□□□□□ -1.11
CDC42SE1-201ENST00000357235 MFSD4AQ8N468 514 aa8.11□□□□□ -1.11
CDC42SE1-201ENST00000357235 TMEM199Q8N511 208 aa8.11□□□□□ -1.11
CDC42SE1-201ENST00000357235 OR5H6Q8NGV6 325 aa8.11□□□□□ -1.11
CDC42SE1-201ENST00000357235 OR4L1Q8NH43 312 aa8.11□□□□□ -1.11
CDC42SE1-201ENST00000357235 METTL6Q8TCB7 284 aa8.11□□□□□ -1.11
CDC42SE1-201ENST00000357235 TTC9Q92623 222 aa8.11□□□□□ -1.11
CDC42SE1-201ENST00000357235 MAGED4Q96JG8 741 aa8.11□□□□□ -1.11
CDC42SE1-201ENST00000357235 ACAT2Q9BWD1 397 aa8.11□□□□□ -1.11
CDC42SE1-201ENST00000357235 YTHDF1Q9BYJ9 559 aaKnown RBP8.11□□□□□ -1.11
CDC42SE1-201ENST00000357235 SPC25Q9HBM1 224 aa8.11□□□□□ -1.11
CDC42SE1-201ENST00000357235 ZFP14Q9HCL3 533 aa8.11□□□□□ -1.11
CDC42SE1-201ENST00000357235 BPIFA1Q9NP55 256 aa8.11□□□□□ -1.11
CDC42SE1-201ENST00000357235 ABCC13Q9NSE7 274 aa8.11□□□□□ -1.11
CDC42SE1-201ENST00000357235 TAS2R13Q9NYV9 303 aa8.11□□□□□ -1.11
CDC42SE1-201ENST00000357235 RNF181Q9P0P0 153 aa8.11□□□□□ -1.11
CDC42SE1-201ENST00000357235 PNMA8BQ9ULN7 279 aaPredicted RBP8.11□□□□□ -1.11
CDC42SE1-201ENST00000357235 NEU3Q9UQ49 428 aa8.11□□□□□ -1.11
CDC42SE1-201ENST00000357235 BOLA1Q9Y3E2 137 aa8.11□□□□□ -1.11
CDC42SE1-201ENST00000357235 ASB1Q9Y576 335 aa8.11□□□□□ -1.11
CDC42SE1-201ENST00000357235 PTCH2Q9Y6C5 1203 aa8.11□□□□□ -1.11
CDC42SE1-201ENST00000357235 ISPDA4D126 451 aa8.1□□□□□ -1.11
CDC42SE1-201ENST00000357235 ARL5CA6NH57 179 aa8.1□□□□□ -1.11
CDC42SE1-201ENST00000357235 C16orf96A6NNT2 1141 aa8.1□□□□□ -1.11
CDC42SE1-201ENST00000357235 IQCF5A8MTL0 148 aa8.1□□□□□ -1.11
CDC42SE1-201ENST00000357235 FFAR3O14843 346 aa8.1□□□□□ -1.11
CDC42SE1-201ENST00000357235 GPR42O15529 346 aa8.1□□□□□ -1.11
CDC42SE1-201ENST00000357235 ABCB7O75027 752 aa8.1□□□□□ -1.11
CDC42SE1-201ENST00000357235 MATN4O95460 622 aa8.1□□□□□ -1.11
CDC42SE1-201ENST00000357235 GUCA1CO95843 209 aa8.1□□□□□ -1.11
CDC42SE1-201ENST00000357235 PRLP01236 227 aa8.1□□□□□ -1.11
CDC42SE1-201ENST00000357235 FGF4P08620 206 aa8.1□□□□□ -1.11
CDC42SE1-201ENST00000357235 CNPP09543 421 aaKnown RBP8.1□□□□□ -1.11
CDC42SE1-201ENST00000357235 MAGP20916 626 aa8.1□□□□□ -1.11
CDC42SE1-201ENST00000357235 FDXRP22570 491 aa8.1□□□□□ -1.11
CDC42SE1-201ENST00000357235 CRHBPP24387 322 aa8.1□□□□□ -1.11
CDC42SE1-201ENST00000357235 B2MP61769 119 aa8.1□□□□□ -1.11
CDC42SE1-201ENST00000357235 CDC42EP1Q00587 391 aa8.1□□□□□ -1.11
CDC42SE1-201ENST00000357235 RAD51Q06609 339 aa8.1□□□□□ -1.11
CDC42SE1-201ENST00000357235 DDR2Q16832 855 aa8.1□□□□□ -1.11
CDC42SE1-201ENST00000357235 PIK3R6Q5UE93 754 aa8.1□□□□□ -1.11
CDC42SE1-201ENST00000357235 C9orf131Q5VYM1 1079 aa8.1□□□□□ -1.11
CDC42SE1-201ENST00000357235 XAF1Q6GPH4 301 aa8.1□□□□□ -1.11
CDC42SE1-201ENST00000357235 GATAD2AQ86YP4 633 aa8.1□□□□□ -1.11
CDC42SE1-201ENST00000357235 TMEM86AQ8N2M4 240 aa8.1□□□□□ -1.11
CDC42SE1-201ENST00000357235 PAF1Q8N7H5 531 aa8.1□□□□□ -1.11
CDC42SE1-201ENST00000357235 EFHBQ8N7U6 833 aa8.1□□□□□ -1.11
CDC42SE1-201ENST00000357235 OR10T2Q8NGX3 314 aa8.1□□□□□ -1.11
CDC42SE1-201ENST00000357235 NPLOC4Q8TAT6 608 aa8.1□□□□□ -1.11
CDC42SE1-201ENST00000357235 CNIH3Q8TBE1 160 aa8.1□□□□□ -1.11
CDC42SE1-201ENST00000357235 FAM162AQ96A26 154 aa8.1□□□□□ -1.11
CDC42SE1-201ENST00000357235 ASB2Q96Q27 587 aa8.1□□□□□ -1.11
CDC42SE1-201ENST00000357235 ATOH8Q96SQ7 321 aa8.1□□□□□ -1.11
CDC42SE1-201ENST00000357235 SPON2Q9BUD6 331 aa8.1□□□□□ -1.11
CDC42SE1-201ENST00000357235 SLA2Q9H6Q3 261 aa8.1□□□□□ -1.11
CDC42SE1-201ENST00000357235 EPS8L2Q9H6S3 715 aa8.1□□□□□ -1.11
CDC42SE1-201ENST00000357235 C8orf4Q9NR00 106 aa8.1□□□□□ -1.11
CDC42SE1-201ENST00000357235 FAM105AQ9NUU6 356 aa8.1□□□□□ -1.11
CDC42SE1-201ENST00000357235 TOR4AQ9NXH8 423 aa8.1□□□□□ -1.11
CDC42SE1-201ENST00000357235 ADGRE2Q9UHX3 823 aa8.1□□□□□ -1.11
CDC42SE1-201ENST00000357235 INVSQ9Y283 1065 aa8.1□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms