RNA–Protein interactions for RNA: ENST00000356435.9

PTPRD-202, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PTPRD, Length 9,472 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-202ENST00000356435 ACBD6Q9BR61 282 aa5.46□□□□□ -1.54
PTPRD-202ENST00000356435 PAIP1Q9H074 479 aaKnown RBP5.46□□□□□ -1.54
PTPRD-202ENST00000356435 ACSS3Q9H6R3 686 aa5.46□□□□□ -1.54
PTPRD-202ENST00000356435 PDP1Q9P0J1 537 aaPredicted RBP5.46□□□□□ -1.54
PTPRD-202ENST00000356435 NPIPA1Q9UND3 350 aa5.46□□□□□ -1.54
PTPRD-202ENST00000356435 KIF1AQ12756 1690 aa5.46□□□□□ -1.54
PTPRD-202ENST00000356435 KDM3BQ7LBC6 1761 aa5.46□□□□□ -1.54
PTPRD-202ENST00000356435 TTLL8A6PVC2 850 aa5.46□□□□□ -1.54
PTPRD-202ENST00000356435 INSIG1O15503 277 aa5.46□□□□□ -1.54
PTPRD-202ENST00000356435 VEGFDO43915 354 aa5.46□□□□□ -1.54
PTPRD-202ENST00000356435 COQ9O75208 318 aa5.46□□□□□ -1.54
PTPRD-202ENST00000356435 TULP3O75386 442 aa5.46□□□□□ -1.54
PTPRD-202ENST00000356435 PRAMEF12O95522 483 aa5.46□□□□□ -1.54
PTPRD-202ENST00000356435 CCNCP24863 283 aa5.46□□□□□ -1.54
PTPRD-202ENST00000356435 ARL3P36405 182 aa5.46□□□□□ -1.54
PTPRD-202ENST00000356435 YBEYP58557 167 aaPredicted RBP5.46□□□□□ -1.54
PTPRD-202ENST00000356435 MC1RQ01726 317 aa5.46□□□□□ -1.54
PTPRD-202ENST00000356435 RIN1Q13671 783 aa5.46□□□□□ -1.54
PTPRD-202ENST00000356435 TAF1AQ15573 450 aaPredicted RBP5.46□□□□□ -1.54
PTPRD-202ENST00000356435 TMEM44Q2T9K0 475 aa5.46□□□□□ -1.54
PTPRD-202ENST00000356435 EARS2Q5JPH6 523 aaKnown RBP5.46□□□□□ -1.54
PTPRD-202ENST00000356435 NUDT13Q86X67 352 aa5.46□□□□□ -1.54
PTPRD-202ENST00000356435 CLHC1Q8NHS4 586 aa5.46□□□□□ -1.54
PTPRD-202ENST00000356435 C1orf216Q8TAB5 229 aa5.46□□□□□ -1.54
PTPRD-202ENST00000356435 KLHL6Q8WZ60 621 aa5.46□□□□□ -1.54
PTPRD-202ENST00000356435 B3GALT6Q96L58 329 aa5.46□□□□□ -1.54
PTPRD-202ENST00000356435 DNAJA2O60884 412 aa5.46□□□□□ -1.54
PTPRD-202ENST00000356435 ACVR2AP27037 513 aa5.46□□□□□ -1.54
PTPRD-202ENST00000356435 HSD11B1P28845 292 aa5.46□□□□□ -1.54
PTPRD-202ENST00000356435 ZIK1Q3SY52 487 aaPredicted RBP5.46□□□□□ -1.54
PTPRD-202ENST00000356435 ADNP2Q6IQ32 1131 aa5.46□□□□□ -1.54
PTPRD-202ENST00000356435 C16orf46Q6P387 395 aa5.46□□□□□ -1.54
PTPRD-202ENST00000356435 RFWD3Q6PCD5 774 aa5.46□□□□□ -1.54
PTPRD-202ENST00000356435 DNM1P34Q6PK57 102 aa5.46□□□□□ -1.54
PTPRD-202ENST00000356435 HOPXQ9BPY8 73 aaPredicted RBP5.46□□□□□ -1.54
PTPRD-202ENST00000356435 TRMT61BQ9BVS5 477 aaKnown RBP5.46□□□□□ -1.54
PTPRD-202ENST00000356435 SMURF1Q9HCE7 757 aa5.46□□□□□ -1.54
PTPRD-202ENST00000356435 RAPGEFL1Q9UHV5 662 aa5.46□□□□□ -1.54
PTPRD-202ENST00000356435 PCDHGB7Q9Y5F8 929 aa5.46□□□□□ -1.54
PTPRD-202ENST00000356435 CLCA3PQ9Y6N3 262 aa5.46□□□□□ -1.54
PTPRD-202ENST00000356435 NUAK1O60285 661 aa5.46□□□□□ -1.54
PTPRD-202ENST00000356435 CBX6O95503 412 aa5.46□□□□□ -1.54
PTPRD-202ENST00000356435 FADS2O95864 444 aaKnown RBP5.46□□□□□ -1.54
PTPRD-202ENST00000356435 AGR2O95994 175 aa5.46□□□□□ -1.54
PTPRD-202ENST00000356435 ADH1BP00325 375 aa5.46□□□□□ -1.54
PTPRD-202ENST00000356435 ARF4P18085 180 aaPredicted RBP5.46□□□□□ -1.54
PTPRD-202ENST00000356435 NR4A1P22736 598 aa5.46□□□□□ -1.54
PTPRD-202ENST00000356435 NCBP2P52298 156 aaKnown RBP eCLIP5.46□□□□□ -1.54
PTPRD-202ENST00000356435 VLDLRP98155 873 aa5.46□□□□□ -1.54
PTPRD-202ENST00000356435 CRHR2Q13324 411 aa5.46□□□□□ -1.54
PTPRD-202ENST00000356435 HSDL1Q3SXM5 330 aa5.46□□□□□ -1.54
PTPRD-202ENST00000356435 CFAP206Q8IYR0 622 aa5.46□□□□□ -1.54
PTPRD-202ENST00000356435 C11orf65Q8NCR3 313 aa5.46□□□□□ -1.54
PTPRD-202ENST00000356435 C7orf43Q8WVR3 580 aa5.46□□□□□ -1.54
PTPRD-202ENST00000356435 SNX27Q96L92 541 aa5.46□□□□□ -1.54
PTPRD-202ENST00000356435 PDZD7Q9H5P4 517 aa5.46□□□□□ -1.54
PTPRD-202ENST00000356435 POLR3BQ9NW08 1133 aaPredicted RBP5.46□□□□□ -1.54
PTPRD-202ENST00000356435 B4GALT7Q9UBV7 327 aa5.46□□□□□ -1.54
PTPRD-202ENST00000356435 USP54Q70EL1 1684 aa5.46□□□□□ -1.54
PTPRD-202ENST00000356435 TPSB2P20231 275 aa5.46□□□□□ -1.54
PTPRD-202ENST00000356435 PER3P56645 1201 aa5.46□□□□□ -1.54
PTPRD-202ENST00000356435 ACTR1AP61163 376 aa5.46□□□□□ -1.54
PTPRD-202ENST00000356435 IFI35P80217 286 aaPredicted RBP5.46□□□□□ -1.54
PTPRD-202ENST00000356435 C2orf80Q0P641 193 aa5.46□□□□□ -1.54
PTPRD-202ENST00000356435 TPSAB1Q15661 275 aa5.46□□□□□ -1.54
PTPRD-202ENST00000356435 SLC1A5Q15758 541 aa5.46□□□□□ -1.54
PTPRD-202ENST00000356435 CARD16Q5EG05 197 aa5.46□□□□□ -1.54
PTPRD-202ENST00000356435 SCIMPQ6UWF3 145 aa5.46□□□□□ -1.54
PTPRD-202ENST00000356435 SLC34A3Q8N130 599 aa5.46□□□□□ -1.54
PTPRD-202ENST00000356435 UBE2J2Q8N2K1 259 aa5.46□□□□□ -1.54
PTPRD-202ENST00000356435 CPSF7Q8N684 471 aaKnown RBP5.46□□□□□ -1.54
PTPRD-202ENST00000356435 DGCR14Q96DF8 476 aaKnown RBP5.46□□□□□ -1.54
PTPRD-202ENST00000356435 NXPE2Q96DL1 559 aa5.46□□□□□ -1.54
PTPRD-202ENST00000356435 RBM4BQ9BQ04 359 aaKnown RBP5.46□□□□□ -1.54
PTPRD-202ENST00000356435 RBM4Q9BWF3 364 aaKnown RBP5.46□□□□□ -1.54
PTPRD-202ENST00000356435 CHID1Q9BWS9 393 aa5.46□□□□□ -1.54
PTPRD-202ENST00000356435 TBC1D10AQ9BXI6 508 aa5.46□□□□□ -1.54
PTPRD-202ENST00000356435 GDAP2Q9NXN4 497 aa5.46□□□□□ -1.54
PTPRD-202ENST00000356435 TUBA8Q9NY65 449 aaPredicted RBP5.46□□□□□ -1.54
PTPRD-202ENST00000356435 RDH8Q9NYR8 311 aa5.46□□□□□ -1.54
PTPRD-202ENST00000356435 ADAMTS3O15072 1205 aa5.45□□□□□ -1.54
PTPRD-202ENST00000356435 SLC31A1O15431 190 aa5.45□□□□□ -1.54
PTPRD-202ENST00000356435 REM1O75628 298 aa5.45□□□□□ -1.54
PTPRD-202ENST00000356435 OR7A10O76100 309 aa5.45□□□□□ -1.54
PTPRD-202ENST00000356435 MT-CYBP00156 380 aaPredicted RBP5.45□□□□□ -1.54
PTPRD-202ENST00000356435 RB1P06400 928 aa5.45□□□□□ -1.54
PTPRD-202ENST00000356435 ALOX5P09917 674 aa5.45□□□□□ -1.54
PTPRD-202ENST00000356435 CRISP3P54108 245 aa5.45□□□□□ -1.54
PTPRD-202ENST00000356435 ABATP80404 500 aa5.45□□□□□ -1.54
PTPRD-202ENST00000356435 LCP2Q13094 533 aa5.45□□□□□ -1.54
PTPRD-202ENST00000356435 PRKD1Q15139 912 aaPredicted RBP5.45□□□□□ -1.54
PTPRD-202ENST00000356435 TMEM126BQ8IUX1 230 aa5.45□□□□□ -1.54
PTPRD-202ENST00000356435 SLC9A9Q8IVB4 645 aa5.45□□□□□ -1.54
PTPRD-202ENST00000356435 CHERPQ8IWX8 916 aaKnown RBP5.45□□□□□ -1.54
PTPRD-202ENST00000356435 OR4C6Q8NH72 309 aa5.45□□□□□ -1.54
PTPRD-202ENST00000356435 KLRG1Q96E93 195 aa5.45□□□□□ -1.54
PTPRD-202ENST00000356435 RTKNQ9BST9 563 aa5.45□□□□□ -1.54
PTPRD-202ENST00000356435 TRMT13Q9NUP7 481 aaKnown RBP5.45□□□□□ -1.54
PTPRD-202ENST00000356435 SALL4Q9UJQ4 1053 aa5.45□□□□□ -1.54
PTPRD-202ENST00000356435 PCDHB3Q9Y5E6 796 aa5.45□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 72.1 ms