RNA–Protein interactions for RNA: ENST00000355155.5

VPS13B-201, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

TSL 1 (best) BASIC

Gene VPS13B, Length 2,822 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-201ENST00000355155 KCNE1BA0A087WTH5 132 aa16.84■□□□□ 0.29
VPS13B-201ENST00000355155 MMP20O60882 483 aa16.84■□□□□ 0.29
VPS13B-201ENST00000355155 STK16O75716 305 aa16.84■□□□□ 0.29
VPS13B-201ENST00000355155 NTSR1P30989 418 aa16.84■□□□□ 0.29
VPS13B-201ENST00000355155 CPA2P48052 419 aa16.84■□□□□ 0.29
VPS13B-201ENST00000355155 MRPS21P82921 87 aaKnown RBP16.84■□□□□ 0.29
VPS13B-201ENST00000355155 RBBP7Q16576 425 aa16.84■□□□□ 0.29
VPS13B-201ENST00000355155 ZXDCQ2QGD7 858 aaPredicted RBP16.84■□□□□ 0.29
VPS13B-201ENST00000355155 TRMT5Q32P41 509 aaKnown RBP16.84■□□□□ 0.29
VPS13B-201ENST00000355155 NXNQ6DKJ4 435 aa16.84■□□□□ 0.29
VPS13B-201ENST00000355155 PGAM4Q8N0Y7 254 aa16.84■□□□□ 0.29
VPS13B-201ENST00000355155 OR4F6Q8NGB9 312 aa16.84■□□□□ 0.29
VPS13B-201ENST00000355155 OR52B6Q8NGF0 335 aa16.84■□□□□ 0.29
VPS13B-201ENST00000355155 MCUR1Q96AQ8 359 aa16.84■□□□□ 0.29
VPS13B-201ENST00000355155 KCNA7Q96RP8 456 aa16.84■□□□□ 0.29
VPS13B-201ENST00000355155 TEX101Q9BY14 249 aa16.84■□□□□ 0.29
VPS13B-201ENST00000355155 DPEP2Q9H4A9 486 aa16.84■□□□□ 0.29
VPS13B-201ENST00000355155 RIC8BQ9NVN3 520 aa16.84■□□□□ 0.29
VPS13B-201ENST00000355155 AIG1Q9NVV5 245 aa16.84■□□□□ 0.29
VPS13B-201ENST00000355155 WWOXQ9NZC7 414 aa16.84■□□□□ 0.29
VPS13B-201ENST00000355155 GRXCR2A6NFK2 248 aa16.83■□□□□ 0.29
VPS13B-201ENST00000355155 PEX11AO75192 247 aa16.83■□□□□ 0.29
VPS13B-201ENST00000355155 OR4F21O95013 312 aa16.83■□□□□ 0.29
VPS13B-201ENST00000355155 IDO1P14902 403 aa16.83■□□□□ 0.29
VPS13B-201ENST00000355155 DRD1P21728 446 aa16.83■□□□□ 0.29
VPS13B-201ENST00000355155 GCKP35557 465 aa16.83■□□□□ 0.29
VPS13B-201ENST00000355155 HSPA7P48741 367 aa16.83■□□□□ 0.29
VPS13B-201ENST00000355155 RPA4Q13156 261 aa16.83■□□□□ 0.29
VPS13B-201ENST00000355155 SNX32Q86XE0 403 aa16.83■□□□□ 0.29
VPS13B-201ENST00000355155 HIC2Q96JB3 615 aa16.83■□□□□ 0.29
VPS13B-201ENST00000355155 IPPKQ9H8X2 491 aa16.83■□□□□ 0.29
VPS13B-201ENST00000355155 A8MUI8 341 aa16.83■□□□□ 0.28
VPS13B-201ENST00000355155 PSMD12O00232 456 aaPredicted RBP16.83■□□□□ 0.28
VPS13B-201ENST00000355155 PLRG1O43660 514 aaKnown RBP16.83■□□□□ 0.28
VPS13B-201ENST00000355155 ACPPP15309 386 aa16.83■□□□□ 0.28
VPS13B-201ENST00000355155 STX5Q13190 355 aa16.83■□□□□ 0.28
VPS13B-201ENST00000355155 C18orf21Q32NC0 220 aaPredicted RBP16.83■□□□□ 0.28
VPS13B-201ENST00000355155 MAP7D1Q3KQU3 841 aa16.83■□□□□ 0.28
VPS13B-201ENST00000355155 POM121L1PQ3SYA9 428 aa16.83■□□□□ 0.28
VPS13B-201ENST00000355155 COL13A1Q5TAT6 717 aaPredicted RBP16.83■□□□□ 0.28
VPS13B-201ENST00000355155 PNCKQ6P2M8 343 aa16.83■□□□□ 0.28
VPS13B-201ENST00000355155 POU5F2Q8N7G0 328 aa16.83■□□□□ 0.28
VPS13B-201ENST00000355155 MCOLN3Q8TDD5 553 aa16.83■□□□□ 0.28
VPS13B-201ENST00000355155 TTYH1Q9H313 450 aaPredicted RBP16.83■□□□□ 0.28
VPS13B-201ENST00000355155 GIPC1O14908 333 aa16.83■□□□□ 0.28
VPS13B-201ENST00000355155 HGFP14210 728 aa16.83■□□□□ 0.28
VPS13B-201ENST00000355155 TRIM23P36406 574 aa16.83■□□□□ 0.28
VPS13B-201ENST00000355155 GPR1P46091 355 aa16.83■□□□□ 0.28
VPS13B-201ENST00000355155 MTTPP55157 894 aa16.83■□□□□ 0.28
VPS13B-201ENST00000355155 ERVK-8P63133 956 aa16.83■□□□□ 0.28
VPS13B-201ENST00000355155 KIAA1161Q6NSJ0 714 aa16.83■□□□□ 0.28
VPS13B-201ENST00000355155 NEK5Q6P3R8 708 aa16.83■□□□□ 0.28
VPS13B-201ENST00000355155 TMEM220Q6QAJ8 160 aa16.83■□□□□ 0.28
VPS13B-201ENST00000355155 Q6ZSR9 355 aa16.83■□□□□ 0.28
VPS13B-201ENST00000355155 DET1Q7L5Y6 550 aa16.83■□□□□ 0.28
VPS13B-201ENST00000355155 KYQ8NBH2 561 aa16.83■□□□□ 0.28
VPS13B-201ENST00000355155 OR2L2Q8NH16 312 aa16.83■□□□□ 0.28
VPS13B-201ENST00000355155 ATL1Q8WXF7 558 aa16.83■□□□□ 0.28
VPS13B-201ENST00000355155 CCDC138Q96M89 665 aa16.83■□□□□ 0.28
VPS13B-201ENST00000355155 EFCAB1Q9HAE3 211 aa16.83■□□□□ 0.28
VPS13B-201ENST00000355155 MID1O15344 667 aa16.82■□□□□ 0.28
VPS13B-201ENST00000355155 LZTS3O60299 673 aaPredicted RBP16.82■□□□□ 0.28
VPS13B-201ENST00000355155 EPB42P16452 691 aa16.82■□□□□ 0.28
VPS13B-201ENST00000355155 LRP8Q14114 963 aa16.82■□□□□ 0.28
VPS13B-201ENST00000355155 BOP1Q14137 746 aaKnown RBP16.82■□□□□ 0.28
VPS13B-201ENST00000355155 ADGRE1Q14246 886 aa16.82■□□□□ 0.28
VPS13B-201ENST00000355155 C11orf96Q7Z7L8 435 aa16.82■□□□□ 0.28
VPS13B-201ENST00000355155 FUNDC1Q8IVP5 155 aa16.82■□□□□ 0.28
VPS13B-201ENST00000355155 NAT14Q8WUY8 206 aa16.82■□□□□ 0.28
VPS13B-201ENST00000355155 SLC25A23Q9BV35 468 aa16.82■□□□□ 0.28
VPS13B-201ENST00000355155 C1QTNF2Q9BXJ5 285 aa16.82■□□□□ 0.28
VPS13B-201ENST00000355155 ZIM2Q9NZV7 527 aa16.82■□□□□ 0.28
VPS13B-201ENST00000355155 COQ6Q9Y2Z9 468 aa16.82■□□□□ 0.28
VPS13B-201ENST00000355155 MTX2O75431 263 aa16.82■□□□□ 0.28
VPS13B-201ENST00000355155 HOXC4P09017 264 aaPredicted RBP16.82■□□□□ 0.28
VPS13B-201ENST00000355155 CCNG1P51959 295 aa16.82■□□□□ 0.28
VPS13B-201ENST00000355155 EMX2Q04743 252 aa16.82■□□□□ 0.28
VPS13B-201ENST00000355155 HSPA14Q0VDF9 509 aa16.82■□□□□ 0.28
VPS13B-201ENST00000355155 FASTKQ14296 549 aaKnown RBP16.82■□□□□ 0.28
VPS13B-201ENST00000355155 TMEM259Q4ZIN3 620 aa16.82■□□□□ 0.28
VPS13B-201ENST00000355155 TP53I13Q8NBR0 393 aaPredicted RBP16.82■□□□□ 0.28
VPS13B-201ENST00000355155 OR2T11Q8NH01 316 aa16.82■□□□□ 0.28
VPS13B-201ENST00000355155 HM13Q8TCT9 377 aa16.82■□□□□ 0.28
VPS13B-201ENST00000355155 PPP1R36Q96LQ0 422 aa16.82■□□□□ 0.28
VPS13B-201ENST00000355155 ATXN10Q9UBB4 475 aa16.82■□□□□ 0.28
VPS13B-201ENST00000355155 SLC7A8Q9UHI5 535 aa16.82■□□□□ 0.28
VPS13B-201ENST00000355155 FZD4Q9ULV1 537 aa16.82■□□□□ 0.28
VPS13B-201ENST00000355155 ANTXRLA6NF34 631 aa16.81■□□□□ 0.28
VPS13B-201ENST00000355155 K7ESM1 405 aa16.81■□□□□ 0.28
VPS13B-201ENST00000355155 SLC28A1O00337 649 aa16.81■□□□□ 0.28
VPS13B-201ENST00000355155 SNRPB2P08579 225 aaKnown RBP16.81■□□□□ 0.28
VPS13B-201ENST00000355155 HIST1H2AGP0C0S8 130 aaPredicted RBP16.81■□□□□ 0.28
VPS13B-201ENST00000355155 EZRP15311 586 aaKnown RBP16.81■□□□□ 0.28
VPS13B-201ENST00000355155 HIST1H2ADP20671 130 aa16.81■□□□□ 0.28
VPS13B-201ENST00000355155 ACTR3P61158 418 aa16.81■□□□□ 0.28
VPS13B-201ENST00000355155 GRB7Q14451 532 aa16.81■□□□□ 0.28
VPS13B-201ENST00000355155 SPATS1Q496A3 300 aa16.81■□□□□ 0.28
VPS13B-201ENST00000355155 USP30Q70CQ3 517 aa16.81■□□□□ 0.28
VPS13B-201ENST00000355155 MILR1Q7Z6M3 343 aa16.81■□□□□ 0.28
VPS13B-201ENST00000355155 ZNF547Q8IVP9 402 aa16.81■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms