RNA–Protein interactions for RNA: ENST00000351677.6

PTPN11-201, Transcript of protein tyrosine phosphatase, non-receptor type 11, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PTPN11, Length 6,101 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN11-201ENST00000351677 GDAP2Q9NXN4 497 aa15.76■□□□□ 0.11
PTPN11-201ENST00000351677 PDE10AQ9Y233 779 aa15.76■□□□□ 0.11
PTPN11-201ENST00000351677 KCTD3Q9Y597 815 aa15.76■□□□□ 0.11
PTPN11-201ENST00000351677 ZNF142P52746 1687 aaPredicted RBP15.76■□□□□ 0.11
PTPN11-201ENST00000351677 E7ENX8 843 aa15.76■□□□□ 0.11
PTPN11-201ENST00000351677 CLK3P49761 638 aaKnown RBP15.76■□□□□ 0.11
PTPN11-201ENST00000351677 CCNHP51946 323 aaPredicted RBP15.76■□□□□ 0.11
PTPN11-201ENST00000351677 SLC18A2Q05940 514 aa15.76■□□□□ 0.11
PTPN11-201ENST00000351677 PAFAH1B3Q15102 231 aaKnown RBP15.76■□□□□ 0.11
PTPN11-201ENST00000351677 RNASE12Q5GAN4 147 aaKnown RBP15.76■□□□□ 0.11
PTPN11-201ENST00000351677 PHTF2Q8N3S3 785 aa15.76■□□□□ 0.11
PTPN11-201ENST00000351677 SCAIQ8N9R8 606 aa15.76■□□□□ 0.11
PTPN11-201ENST00000351677 KREMEN2Q8NCW0 462 aa15.76■□□□□ 0.11
PTPN11-201ENST00000351677 KAT2AQ92830 837 aa15.76■□□□□ 0.11
PTPN11-201ENST00000351677 HPS1Q92902 700 aa15.76■□□□□ 0.11
PTPN11-201ENST00000351677 LMLNQ96KR4 655 aa15.76■□□□□ 0.11
PTPN11-201ENST00000351677 C11orf16Q9NQ32 467 aa15.76■□□□□ 0.11
PTPN11-201ENST00000351677 C9P02748 559 aa15.75■□□□□ 0.11
PTPN11-201ENST00000351677 CKMT2P17540 419 aa15.75■□□□□ 0.11
PTPN11-201ENST00000351677 ALDH4A1P30038 563 aa15.75■□□□□ 0.11
PTPN11-201ENST00000351677 PSMD4P55036 377 aaKnown RBP15.75■□□□□ 0.11
PTPN11-201ENST00000351677 LGALS3BPQ08380 585 aa15.75■□□□□ 0.11
PTPN11-201ENST00000351677 LYSMD3Q7Z3D4 306 aa15.75■□□□□ 0.11
PTPN11-201ENST00000351677 DNAJB7Q7Z6W7 309 aaPredicted RBP15.75■□□□□ 0.11
PTPN11-201ENST00000351677 CAPNS2Q96L46 248 aa15.75■□□□□ 0.11
PTPN11-201ENST00000351677 TRIM8Q9BZR9 551 aa15.75■□□□□ 0.11
PTPN11-201ENST00000351677 STYXL1Q9Y6J8 313 aa15.75■□□□□ 0.11
PTPN11-201ENST00000351677 EI24O14681 340 aa15.75■□□□□ 0.11
PTPN11-201ENST00000351677 IDH3BO43837 385 aa15.75■□□□□ 0.11
PTPN11-201ENST00000351677 CBFA2T3O75081 653 aa15.75■□□□□ 0.11
PTPN11-201ENST00000351677 MTX2O75431 263 aa15.75■□□□□ 0.11
PTPN11-201ENST00000351677 AP2A2O94973 939 aa15.75■□□□□ 0.11
PTPN11-201ENST00000351677 SVOPLQ8N434 492 aa15.75■□□□□ 0.11
PTPN11-201ENST00000351677 CHCHD6Q9BRQ6 235 aa15.75■□□□□ 0.11
PTPN11-201ENST00000351677 TMEM138Q9NPI0 162 aa15.75■□□□□ 0.11
PTPN11-201ENST00000351677 VIPP01282 170 aa15.75■□□□□ 0.11
PTPN11-201ENST00000351677 ACRP10323 421 aa15.75■□□□□ 0.11
PTPN11-201ENST00000351677 INCA1Q0VD86 236 aa15.75■□□□□ 0.11
PTPN11-201ENST00000351677 CWF19L1Q69YN2 538 aaKnown RBP15.75■□□□□ 0.11
PTPN11-201ENST00000351677 KRT74Q7RTS7 529 aa15.75■□□□□ 0.11
PTPN11-201ENST00000351677 ZNF563Q8TA94 476 aa15.75■□□□□ 0.11
PTPN11-201ENST00000351677 PIWIL1Q96J94 861 aaKnown RBP15.75■□□□□ 0.11
PTPN11-201ENST00000351677 TIMMDC1Q9NPL8 285 aa15.75■□□□□ 0.11
PTPN11-201ENST00000351677 MRPS33Q9Y291 106 aaKnown RBP15.75■□□□□ 0.11
PTPN11-201ENST00000351677 IQCMA0A1B0GVH7 501 aa15.75■□□□□ 0.11
PTPN11-201ENST00000351677 LRRC14BA6NHZ5 514 aa15.75■□□□□ 0.11
PTPN11-201ENST00000351677 MAT2AP31153 395 aaKnown RBP15.75■□□□□ 0.11
PTPN11-201ENST00000351677 RGS8P57771 180 aaPredicted RBP15.75■□□□□ 0.11
PTPN11-201ENST00000351677 ADGRF1Q5T601 910 aa15.75■□□□□ 0.11
PTPN11-201ENST00000351677 TP53INP1Q96A56 240 aa15.75■□□□□ 0.11
PTPN11-201ENST00000351677 OR2AG1Q9H205 316 aa15.75■□□□□ 0.11
PTPN11-201ENST00000351677 MCUBQ9NWR8 336 aa15.75■□□□□ 0.11
PTPN11-201ENST00000351677 PHLPP1O60346 1717 aa15.75■□□□□ 0.11
PTPN11-201ENST00000351677 IFNGP01579 166 aa15.75■□□□□ 0.11
PTPN11-201ENST00000351677 RAP2AP10114 183 aa15.75■□□□□ 0.11
PTPN11-201ENST00000351677 KCNE1P15382 129 aa15.75■□□□□ 0.11
PTPN11-201ENST00000351677 RHAGQ02094 409 aa15.75■□□□□ 0.11
PTPN11-201ENST00000351677 SRSF11Q05519 484 aaKnown RBP15.75■□□□□ 0.11
PTPN11-201ENST00000351677 EGFLAMQ63HQ2 1017 aa15.75■□□□□ 0.11
PTPN11-201ENST00000351677 KLK6Q92876 244 aa15.75■□□□□ 0.11
PTPN11-201ENST00000351677 PCYT2Q99447 389 aa15.75■□□□□ 0.11
PTPN11-201ENST00000351677 PCDHGA11Q9Y5H2 935 aa15.75■□□□□ 0.11
PTPN11-201ENST00000351677 FAM86C2PA6NEL3 165 aa15.74■□□□□ 0.11
PTPN11-201ENST00000351677 ADAMDEC1O15204 470 aa15.74■□□□□ 0.11
PTPN11-201ENST00000351677 PLA2G16P53816 162 aa15.74■□□□□ 0.11
PTPN11-201ENST00000351677 DDX59Q5T1V6 619 aaKnown RBP eCLIP15.74■□□□□ 0.11
PTPN11-201ENST00000351677 PIK3R6Q5UE93 754 aa15.74■□□□□ 0.11
PTPN11-201ENST00000351677 GLB1L3Q8NCI6 653 aaPredicted RBP15.74■□□□□ 0.11
PTPN11-201ENST00000351677 LRRC58Q96CX6 371 aa15.74■□□□□ 0.11
PTPN11-201ENST00000351677 DIABLOQ9NR28 239 aa15.74■□□□□ 0.11
PTPN11-201ENST00000351677 GALPQ9UBC7 116 aa15.74■□□□□ 0.11
PTPN11-201ENST00000351677 PSAT1Q9Y617 370 aa15.74■□□□□ 0.11
PTPN11-201ENST00000351677 PGRMC2O15173 223 aa15.74■□□□□ 0.11
PTPN11-201ENST00000351677 SLC7A1P30825 629 aa15.74■□□□□ 0.11
PTPN11-201ENST00000351677 OGFOD2Q6N063 350 aa15.74■□□□□ 0.11
PTPN11-201ENST00000351677 CXorf57Q6NSI4 855 aaKnown RBP15.74■□□□□ 0.11
PTPN11-201ENST00000351677 ZCCHC10Q8TBK6 192 aa15.74■□□□□ 0.11
PTPN11-201ENST00000351677 SH3RF2Q8TEC5 729 aa15.74■□□□□ 0.11
PTPN11-201ENST00000351677 CANT1Q8WVQ1 401 aa15.74■□□□□ 0.11
PTPN11-201ENST00000351677 ZNF570Q96NI8 536 aa15.74■□□□□ 0.11
PTPN11-201ENST00000351677 TMEM209Q96SK2 561 aa15.74■□□□□ 0.11
PTPN11-201ENST00000351677 RACGAP1Q9H0H5 632 aa15.74■□□□□ 0.11
PTPN11-201ENST00000351677 TRPS1Q9UHF7 1281 aa15.74■□□□□ 0.11
PTPN11-201ENST00000351677 RUVBL1Q9Y265 456 aaKnown RBP15.74■□□□□ 0.11
PTPN11-201ENST00000351677 COQ6Q9Y2Z9 468 aa15.74■□□□□ 0.11
PTPN11-201ENST00000351677 A0A0U1RQF3 1178 aa15.74■□□□□ 0.11
PTPN11-201ENST00000351677 PDLIM1O00151 329 aa15.74■□□□□ 0.11
PTPN11-201ENST00000351677 CDC7O00311 574 aa15.74■□□□□ 0.11
PTPN11-201ENST00000351677 PRKAR1AP10644 381 aa15.74■□□□□ 0.11
PTPN11-201ENST00000351677 GJA1P17302 382 aa15.74■□□□□ 0.11
PTPN11-201ENST00000351677 GNAZP19086 355 aa15.74■□□□□ 0.11
PTPN11-201ENST00000351677 ALG11Q2TAA5 492 aa15.74■□□□□ 0.11
PTPN11-201ENST00000351677 PDE12Q6L8Q7 609 aaKnown RBP15.74■□□□□ 0.11
PTPN11-201ENST00000351677 CDH24Q86UP0 819 aa15.74■□□□□ 0.11
PTPN11-201ENST00000351677 NARS2Q96I59 477 aaKnown RBP15.74■□□□□ 0.11
PTPN11-201ENST00000351677 COX4I2Q96KJ9 171 aa15.74■□□□□ 0.11
PTPN11-201ENST00000351677 KIFC1Q9BW19 673 aa15.74■□□□□ 0.11
PTPN11-201ENST00000351677 LRRC3Q9BY71 257 aa15.74■□□□□ 0.11
PTPN11-201ENST00000351677 TLL2Q9Y6L7 1015 aa15.74■□□□□ 0.11
PTPN11-201ENST00000351677 COLEC10Q9Y6Z7 277 aa15.74■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms