RNA–Protein interactions for RNA: ENST00000350148.9

SMAD9-201, Transcript of SMAD family member 9, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SMAD9, Length 5,447 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD9-201ENST00000350148 DEFB103AP81534 67 aa11.96□□□□□ -0.49
SMAD9-201ENST00000350148 PEX5LQ8IYB4 626 aa11.96□□□□□ -0.49
SMAD9-201ENST00000350148 AASDHPPTQ9NRN7 309 aa11.96□□□□□ -0.49
SMAD9-201ENST00000350148 C1orf109Q9NX04 203 aa11.96□□□□□ -0.49
SMAD9-201ENST00000350148 OR51F1A6NGY5 319 aa11.96□□□□□ -0.5
SMAD9-201ENST00000350148 CLPTM1O96005 669 aa11.96□□□□□ -0.5
SMAD9-201ENST00000350148 PTGS2P35354 604 aa11.96□□□□□ -0.5
SMAD9-201ENST00000350148 AFF1P51825 1210 aaKnown RBP11.96□□□□□ -0.5
SMAD9-201ENST00000350148 C21orf59P57076 290 aa11.96□□□□□ -0.5
SMAD9-201ENST00000350148 ERVK-8P63133 956 aa11.96□□□□□ -0.5
SMAD9-201ENST00000350148 ILF3Q12906 894 aaKnown RBP eCLIP11.96□□□□□ -0.5
SMAD9-201ENST00000350148 LRRC32Q14392 662 aa11.96□□□□□ -0.5
SMAD9-201ENST00000350148 PCLAFQ15004 111 aa11.96□□□□□ -0.5
SMAD9-201ENST00000350148 C6orf89Q6UWU4 347 aa11.96□□□□□ -0.5
SMAD9-201ENST00000350148 RTN4RL1Q86UN2 441 aaPredicted RBP11.96□□□□□ -0.5
SMAD9-201ENST00000350148 DENND1AQ8TEH3 1009 aa11.96□□□□□ -0.5
SMAD9-201ENST00000350148 AHCYL2Q96HN2 611 aaKnown RBP11.96□□□□□ -0.5
SMAD9-201ENST00000350148 SPACA7Q96KW9 195 aa11.96□□□□□ -0.5
SMAD9-201ENST00000350148 OR52E6Q96RD3 313 aa11.96□□□□□ -0.5
SMAD9-201ENST00000350148 C12orf65Q9H3J6 166 aaKnown RBP11.96□□□□□ -0.5
SMAD9-201ENST00000350148 CLDND1Q9NY35 253 aa11.96□□□□□ -0.5
SMAD9-201ENST00000350148 NIPSNAP2O75323 286 aa11.96□□□□□ -0.5
SMAD9-201ENST00000350148 HMGCLP35914 325 aa11.96□□□□□ -0.5
SMAD9-201ENST00000350148 SMIM11AP58511 58 aa11.96□□□□□ -0.5
SMAD9-201ENST00000350148 OLR1P78380 273 aa11.96□□□□□ -0.5
SMAD9-201ENST00000350148 PRKCQQ04759 706 aa11.96□□□□□ -0.5
SMAD9-201ENST00000350148 SEMA3BQ13214 749 aa11.96□□□□□ -0.5
SMAD9-201ENST00000350148 SEMA3AQ14563 771 aa11.96□□□□□ -0.5
SMAD9-201ENST00000350148 ZNF460Q14592 562 aa11.96□□□□□ -0.5
SMAD9-201ENST00000350148 RFTN2Q52LD8 501 aaPredicted RBP11.96□□□□□ -0.5
SMAD9-201ENST00000350148 IRGCQ6NXR0 463 aa11.96□□□□□ -0.5
SMAD9-201ENST00000350148 TTC9BQ8N6N2 239 aa11.96□□□□□ -0.5
SMAD9-201ENST00000350148 GSTCDQ8NEC7 633 aa11.96□□□□□ -0.5
SMAD9-201ENST00000350148 ZNF184Q99676 751 aaPredicted RBP11.96□□□□□ -0.5
SMAD9-201ENST00000350148 DNAAF2Q9NVR5 837 aaKnown RBP11.96□□□□□ -0.5
SMAD9-201ENST00000350148 EIF2B4Q9UI10 523 aaKnown RBP11.96□□□□□ -0.5
SMAD9-201ENST00000350148 RBBP6Q7Z6E9 1792 aaKnown RBP11.95□□□□□ -0.5
SMAD9-201ENST00000350148 S1PR4O95977 384 aa11.95□□□□□ -0.5
SMAD9-201ENST00000350148 FYNP06241 537 aa11.95□□□□□ -0.5
SMAD9-201ENST00000350148 IFNGR2P38484 337 aa11.95□□□□□ -0.5
SMAD9-201ENST00000350148 GRIA2P42262 883 aa11.95□□□□□ -0.5
SMAD9-201ENST00000350148 KHDRBS1Q07666 443 aaKnown RBP eCLIP11.95□□□□□ -0.5
SMAD9-201ENST00000350148 PPCDCQ96CD2 204 aa11.95□□□□□ -0.5
SMAD9-201ENST00000350148 PLEKHG4BQ96PX9 1271 aa11.95□□□□□ -0.5
SMAD9-201ENST00000350148 WDR26Q9H7D7 661 aa11.95□□□□□ -0.5
SMAD9-201ENST00000350148 TRPC4Q9UBN4 977 aa11.95□□□□□ -0.5
SMAD9-201ENST00000350148 B4GALT6Q9UBX8 382 aa11.95□□□□□ -0.5
SMAD9-201ENST00000350148 CD84Q9UIB8 345 aa11.95□□□□□ -0.5
SMAD9-201ENST00000350148 TMED5Q9Y3A6 229 aa11.95□□□□□ -0.5
SMAD9-201ENST00000350148 TSPAN6O43657 245 aa11.95□□□□□ -0.5
SMAD9-201ENST00000350148 TPST1O60507 370 aa11.95□□□□□ -0.5
SMAD9-201ENST00000350148 CBFA2T3O75081 653 aa11.95□□□□□ -0.5
SMAD9-201ENST00000350148 AMD1P17707 334 aa11.95□□□□□ -0.5
SMAD9-201ENST00000350148 ATP6V1B2P21281 511 aa11.95□□□□□ -0.5
SMAD9-201ENST00000350148 RPS3P23396 243 aaKnown RBP eCLIP11.95□□□□□ -0.5
SMAD9-201ENST00000350148 SRSF11Q05519 484 aaKnown RBP11.95□□□□□ -0.5
SMAD9-201ENST00000350148 BLMHQ13867 455 aa11.95□□□□□ -0.5
SMAD9-201ENST00000350148 DHCR24Q15392 516 aa11.95□□□□□ -0.5
SMAD9-201ENST00000350148 LRRTM4Q86VH4 590 aa11.95□□□□□ -0.5
SMAD9-201ENST00000350148 KHSRPQ92945 711 aaKnown RBP eCLIP11.95□□□□□ -0.5
SMAD9-201ENST00000350148 ZIM2Q9NZV7 527 aa11.95□□□□□ -0.5
SMAD9-201ENST00000350148 FAM234BA2RU67 622 aa11.95□□□□□ -0.5
SMAD9-201ENST00000350148 ISM1B1AKI9 464 aa11.95□□□□□ -0.5
SMAD9-201ENST00000350148 RFXANKO14593 260 aa11.95□□□□□ -0.5
SMAD9-201ENST00000350148 CHIT1Q13231 466 aa11.95□□□□□ -0.5
SMAD9-201ENST00000350148 CPTPQ5TA50 214 aa11.95□□□□□ -0.5
SMAD9-201ENST00000350148 EPGNQ6UW88 154 aa11.95□□□□□ -0.5
SMAD9-201ENST00000350148 TSPEARQ8WU66 669 aa11.95□□□□□ -0.5
SMAD9-201ENST00000350148 C1orf21Q9H246 121 aa11.95□□□□□ -0.5
SMAD9-201ENST00000350148 NSUN3Q9H649 340 aaKnown RBP11.95□□□□□ -0.5
SMAD9-201ENST00000350148 SYNDIG1Q9H7V2 258 aa11.95□□□□□ -0.5
SMAD9-201ENST00000350148 H2AFY2Q9P0M6 372 aaPredicted RBP11.95□□□□□ -0.5
SMAD9-201ENST00000350148 PSME4Q14997 1843 aa11.95□□□□□ -0.5
SMAD9-201ENST00000350148 SIPA1L1O43166 1804 aa11.95□□□□□ -0.5
SMAD9-201ENST00000350148 OR2AG2A6NM03 316 aa11.95□□□□□ -0.5
SMAD9-201ENST00000350148 OR4F21O95013 312 aa11.95□□□□□ -0.5
SMAD9-201ENST00000350148 KIR3DL1P43629 444 aa11.95□□□□□ -0.5
SMAD9-201ENST00000350148 FOXM1Q08050 763 aa11.95□□□□□ -0.5
SMAD9-201ENST00000350148 DLG1Q12959 904 aa11.95□□□□□ -0.5
SMAD9-201ENST00000350148 NFATC2Q13469 925 aa11.95□□□□□ -0.5
SMAD9-201ENST00000350148 DSELQ8IZU8 1212 aa11.95□□□□□ -0.5
SMAD9-201ENST00000350148 MARK4Q96L34 752 aa11.95□□□□□ -0.5
SMAD9-201ENST00000350148 ZBP1Q9H171 429 aa11.95□□□□□ -0.5
SMAD9-201ENST00000350148 C8orf33Q9H7E9 229 aaPredicted RBP11.95□□□□□ -0.5
SMAD9-201ENST00000350148 IMPAD1Q9NX62 359 aa11.95□□□□□ -0.5
SMAD9-201ENST00000350148 ZCWPW2A0A1B0GU75 182 aa11.94□□□□□ -0.5
SMAD9-201ENST00000350148 PIP5K1BO14986 540 aa11.94□□□□□ -0.5
SMAD9-201ENST00000350148 SEC24AO95486 1093 aa11.94□□□□□ -0.5
SMAD9-201ENST00000350148 ATF6P18850 670 aa11.94□□□□□ -0.5
SMAD9-201ENST00000350148 SP100P23497 879 aaPredicted RBP11.94□□□□□ -0.5
SMAD9-201ENST00000350148 PUDPQ08623 228 aa11.94□□□□□ -0.5
SMAD9-201ENST00000350148 SCRN3Q0VDG4 424 aa11.94□□□□□ -0.5
SMAD9-201ENST00000350148 ELAVL3Q14576 367 aaKnown RBP11.94□□□□□ -0.5
SMAD9-201ENST00000350148 RBM20Q5T481 1227 aaKnown RBP11.94□□□□□ -0.5
SMAD9-201ENST00000350148 LIMS2Q7Z4I7 341 aa11.94□□□□□ -0.5
SMAD9-201ENST00000350148 RBM15BQ8NDT2 890 aaKnown RBP11.94□□□□□ -0.5
SMAD9-201ENST00000350148 CYB5D2Q8WUJ1 264 aa11.94□□□□□ -0.5
SMAD9-201ENST00000350148 SLC22A18Q96BI1 424 aa11.94□□□□□ -0.5
SMAD9-201ENST00000350148 CPEB1Q9BZB8 566 aaKnown RBP11.94□□□□□ -0.5
SMAD9-201ENST00000350148 ARHGEF3Q9NR81 526 aa11.94□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms