RNA–Protein interactions for RNA: ENST00000348495.10

SSBP4-202, Transcript of single stranded DNA binding protein 4, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene SSBP4, Length 1,721 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-202ENST00000348495 ZDHHC5Q9C0B5 715 aa26.45■■□□□ 1.83
SSBP4-202ENST00000348495 APOBEC3BQ9UH17 382 aaKnown RBP26.45■■□□□ 1.83
SSBP4-202ENST00000348495 PCOLCE2Q9UKZ9 415 aa26.45■■□□□ 1.83
SSBP4-202ENST00000348495 WDR37Q9Y2I8 494 aa26.45■■□□□ 1.83
SSBP4-202ENST00000348495 MTHFD2P13995 350 aa26.45■■□□□ 1.82
SSBP4-202ENST00000348495 MAPK9P45984 424 aa26.45■■□□□ 1.82
SSBP4-202ENST00000348495 SERPINB4P48594 390 aa26.45■■□□□ 1.82
SSBP4-202ENST00000348495 CAPRIN2Q6IMN6 1127 aaKnown RBP26.45■■□□□ 1.82
SSBP4-202ENST00000348495 WASH2PQ6VEQ5 465 aa26.45■■□□□ 1.82
SSBP4-202ENST00000348495 SLC12A9Q9BXP2 914 aa26.45■■□□□ 1.82
SSBP4-202ENST00000348495 WWP1Q9H0M0 922 aa26.45■■□□□ 1.82
SSBP4-202ENST00000348495 WASH6PQ9NQA3 447 aa26.45■■□□□ 1.82
SSBP4-202ENST00000348495 OGFRQ9NZT2 677 aa26.45■■□□□ 1.82
SSBP4-202ENST00000348495 COPG2Q9UBF2 871 aa26.45■■□□□ 1.82
SSBP4-202ENST00000348495 TBC1D29Q9UFV1 150 aa26.45■■□□□ 1.82
SSBP4-202ENST00000348495 R4GN57 208 aa26.45■■□□□ 1.82
SSBP4-202ENST00000348495 RPL10P27635 214 aaKnown RBP26.44■■□□□ 1.82
SSBP4-202ENST00000348495 PHKG1Q16816 387 aa26.44■■□□□ 1.82
SSBP4-202ENST00000348495 ZYG11AQ6WRX3 759 aa26.44■■□□□ 1.82
SSBP4-202ENST00000348495 GSDMCQ9BYG8 508 aa26.44■■□□□ 1.82
SSBP4-202ENST00000348495 PRDM8Q9NQV8 689 aa26.44■■□□□ 1.82
SSBP4-202ENST00000348495 RNF112Q9ULX5 631 aa26.44■■□□□ 1.82
SSBP4-202ENST00000348495 PSMD13Q9UNM6 376 aa26.44■■□□□ 1.82
SSBP4-202ENST00000348495 OARD1Q9Y530 152 aa26.44■■□□□ 1.82
SSBP4-202ENST00000348495 USP34Q70CQ2 3546 aa26.44■■□□□ 1.82
SSBP4-202ENST00000348495 A6NCN8 305 aa26.43■■□□□ 1.82
SSBP4-202ENST00000348495 CELA2BP08218 269 aaPredicted RBP26.43■■□□□ 1.82
SSBP4-202ENST00000348495 SLC35G4P0C7Q5 338 aa26.43■■□□□ 1.82
SSBP4-202ENST00000348495 CPA3P15088 417 aa26.43■■□□□ 1.82
SSBP4-202ENST00000348495 ACTR1BP42025 376 aa26.43■■□□□ 1.82
SSBP4-202ENST00000348495 ACTR1AP61163 376 aa26.43■■□□□ 1.82
SSBP4-202ENST00000348495 PCLAFQ15004 111 aa26.43■■□□□ 1.82
SSBP4-202ENST00000348495 TCEA2Q15560 299 aa26.43■■□□□ 1.82
SSBP4-202ENST00000348495 ABRAXAS1Q6UWZ7 409 aa26.43■■□□□ 1.82
SSBP4-202ENST00000348495 CCDC63Q8NA47 563 aa26.43■■□□□ 1.82
SSBP4-202ENST00000348495 LOXL4Q96JB6 756 aa26.43■■□□□ 1.82
SSBP4-202ENST00000348495 RDH14Q9HBH5 336 aa26.43■■□□□ 1.82
SSBP4-202ENST00000348495 INTS9Q9NV88 658 aaKnown RBP26.43■■□□□ 1.82
SSBP4-202ENST00000348495 SNX11Q9Y5W9 270 aa26.43■■□□□ 1.82
SSBP4-202ENST00000348495 CTSEP14091 401 aa26.42■■□□□ 1.82
SSBP4-202ENST00000348495 TGFBIQ15582 683 aa26.42■■□□□ 1.82
SSBP4-202ENST00000348495 DUOXA1Q1HG43 343 aa26.42■■□□□ 1.82
SSBP4-202ENST00000348495 UAP1L1Q3KQV9 507 aa26.42■■□□□ 1.82
SSBP4-202ENST00000348495 PRRT3Q5FWE3 981 aa26.42■■□□□ 1.82
SSBP4-202ENST00000348495 HHATQ5VTY9 493 aa26.42■■□□□ 1.82
SSBP4-202ENST00000348495 SLC30A9Q6PML9 568 aa26.42■■□□□ 1.82
SSBP4-202ENST00000348495 UNC5DQ6UXZ4 953 aa26.42■■□□□ 1.82
SSBP4-202ENST00000348495 UBE2R2Q712K3 238 aaPredicted RBP26.42■■□□□ 1.82
SSBP4-202ENST00000348495 RABEPKQ7Z6M1 372 aa26.42■■□□□ 1.82
SSBP4-202ENST00000348495 GPSM1Q86YR5 675 aa26.42■■□□□ 1.82
SSBP4-202ENST00000348495 PARVBQ9HBI1 364 aa26.42■■□□□ 1.82
SSBP4-202ENST00000348495 MID2Q9UJV3 735 aa26.42■■□□□ 1.82
SSBP4-202ENST00000348495 PDE10AQ9Y233 779 aa26.42■■□□□ 1.82
SSBP4-202ENST00000348495 WDFY4Q6ZS81 3184 aa26.42■■□□□ 1.82
SSBP4-202ENST00000348495 SYCE1LA8MT33 242 aa26.42■■□□□ 1.82
SSBP4-202ENST00000348495 EML2O95834 649 aa26.42■■□□□ 1.82
SSBP4-202ENST00000348495 ENO2P09104 434 aaPredicted RBP26.42■■□□□ 1.82
SSBP4-202ENST00000348495 LPAL2Q16609 132 aa26.42■■□□□ 1.82
SSBP4-202ENST00000348495 PRAMEF14Q5SWL7 426 aa26.42■■□□□ 1.82
SSBP4-202ENST00000348495 ZC3H14Q6PJT7 736 aaKnown RBP26.42■■□□□ 1.82
SSBP4-202ENST00000348495 CEP76Q8TAP6 659 aa26.42■■□□□ 1.82
SSBP4-202ENST00000348495 FOPNLQ96NB1 174 aa26.42■■□□□ 1.82
SSBP4-202ENST00000348495 ARHGEF33A8MVX0 844 aa26.41■■□□□ 1.82
SSBP4-202ENST00000348495 UBXN8O00124 270 aa26.41■■□□□ 1.82
SSBP4-202ENST00000348495 KLK8O60259 260 aa26.41■■□□□ 1.82
SSBP4-202ENST00000348495 DLX3O60479 287 aa26.41■■□□□ 1.82
SSBP4-202ENST00000348495 BPGMP07738 259 aa26.41■■□□□ 1.82
SSBP4-202ENST00000348495 MYL2P10916 166 aa26.41■■□□□ 1.82
SSBP4-202ENST00000348495 PI4KAP42356 2102 aa26.41■■□□□ 1.82
SSBP4-202ENST00000348495 HNRNPKP61978 463 aaKnown RBP eCLIP26.41■■□□□ 1.821e-17■■■■■ 94.9
SSBP4-202ENST00000348495 CLCA4Q14CN2 919 aa26.41■■□□□ 1.82
SSBP4-202ENST00000348495 EEF1AKMT2Q5JPI9 291 aaKnown RBP26.41■■□□□ 1.82
SSBP4-202ENST00000348495 FBXO15Q8NCQ5 510 aaPredicted RBP26.41■■□□□ 1.82
SSBP4-202ENST00000348495 CFAP61Q8NHU2 1237 aa26.41■■□□□ 1.82
SSBP4-202ENST00000348495 TFGQ92734 400 aaPredicted RBP26.41■■□□□ 1.82
SSBP4-202ENST00000348495 INSM2Q96T92 566 aaPredicted RBP26.41■■□□□ 1.82
SSBP4-202ENST00000348495 PAIP2Q9BPZ3 127 aaKnown RBP26.41■■□□□ 1.82
SSBP4-202ENST00000348495 CAPN10Q9HC96 672 aa26.41■■□□□ 1.82
SSBP4-202ENST00000348495 TAAR2Q9P1P5 351 aa26.41■■□□□ 1.82
SSBP4-202ENST00000348495 CACNA1HO95180 2353 aa26.4■■□□□ 1.82
SSBP4-202ENST00000348495 IFRD1O00458 451 aaPredicted RBP26.4■■□□□ 1.82
SSBP4-202ENST00000348495 BIRC5O15392 142 aa26.4■■□□□ 1.82
SSBP4-202ENST00000348495 SNX2O60749 519 aa26.4■■□□□ 1.82
SSBP4-202ENST00000348495 EPN2O95208 641 aa26.4■■□□□ 1.82
SSBP4-202ENST00000348495 C1orf105O95561 183 aa26.4■■□□□ 1.82
SSBP4-202ENST00000348495 GYS2P54840 703 aa26.4■■□□□ 1.82
SSBP4-202ENST00000348495 MECRQ9BV79 373 aa26.4■■□□□ 1.82
SSBP4-202ENST00000348495 SCHIP1Q9P0W5 487 aaPredicted RBP26.4■■□□□ 1.82
SSBP4-202ENST00000348495 NEMP2A6NFY4 417 aa26.39■■□□□ 1.82
SSBP4-202ENST00000348495 PDZK1P1A8MUH7 402 aa26.39■■□□□ 1.82
SSBP4-202ENST00000348495 POLR3GO15318 223 aaPredicted RBP26.39■■□□□ 1.82
SSBP4-202ENST00000348495 KCNA4P22459 653 aa26.39■■□□□ 1.82
SSBP4-202ENST00000348495 ATP5F1P24539 256 aaPredicted RBP26.39■■□□□ 1.82
SSBP4-202ENST00000348495 ALDH3A1P30838 453 aa26.39■■□□□ 1.82
SSBP4-202ENST00000348495 RXRGP48443 463 aa26.39■■□□□ 1.82
SSBP4-202ENST00000348495 C1orf61Q13536 156 aa26.39■■□□□ 1.82
SSBP4-202ENST00000348495 ELOCQ15369 112 aa26.39■■□□□ 1.82
SSBP4-202ENST00000348495 FRA10AC1Q70Z53 315 aa26.39■■□□□ 1.82
SSBP4-202ENST00000348495 C10orf107Q8IVU9 208 aa26.39■■□□□ 1.82
SSBP4-202ENST00000348495 OXSMQ9NWU1 459 aa26.39■■□□□ 1.82
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms