RNA–Protein interactions for RNA: ENST00000346562.6

NPAS3-201, Transcript of neuronal PAS domain protein 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene NPAS3, Length 5,847 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS3-201ENST00000346562 P4HA3Q7Z4N8 544 aa22.76■■□□□ 1.23
NPAS3-201ENST00000346562 ZNF527Q8NB42 609 aa22.76■■□□□ 1.23
NPAS3-201ENST00000346562 GPR151Q8TDV0 419 aa22.76■■□□□ 1.23
NPAS3-201ENST00000346562 IFT27Q9BW83 186 aa22.76■■□□□ 1.23
NPAS3-201ENST00000346562 C1orf109Q9NX04 203 aa22.76■■□□□ 1.23
NPAS3-201ENST00000346562 SIRPGQ9P1W8 387 aa22.76■■□□□ 1.23
NPAS3-201ENST00000346562 FAM240BA0A1B0GVZ2 78 aa22.75■■□□□ 1.23
NPAS3-201ENST00000346562 REM1O75628 298 aa22.75■■□□□ 1.23
NPAS3-201ENST00000346562 PRAMEF12O95522 483 aa22.75■■□□□ 1.23
NPAS3-201ENST00000346562 SGCBQ16585 318 aa22.75■■□□□ 1.23
NPAS3-201ENST00000346562 CPT1BQ92523 772 aa22.75■■□□□ 1.23
NPAS3-201ENST00000346562 LENG1Q96BZ8 264 aaPredicted RBP22.75■■□□□ 1.23
NPAS3-201ENST00000346562 ZNF347Q96SE7 839 aa22.75■■□□□ 1.23
NPAS3-201ENST00000346562 SMPD3Q9NY59 655 aaPredicted RBP22.75■■□□□ 1.23
NPAS3-201ENST00000346562 NOL4O94818 638 aa22.75■■□□□ 1.23
NPAS3-201ENST00000346562 GPIP06744 558 aa22.75■■□□□ 1.23
NPAS3-201ENST00000346562 DNAJB7Q7Z6W7 309 aaPredicted RBP22.75■■□□□ 1.23
NPAS3-201ENST00000346562 PRSS58Q8IYP2 241 aa22.75■■□□□ 1.23
NPAS3-201ENST00000346562 TP53INP1Q96A56 240 aa22.75■■□□□ 1.23
NPAS3-201ENST00000346562 LGR4Q9BXB1 951 aa22.75■■□□□ 1.23
NPAS3-201ENST00000346562 EIF2B3Q9NR50 452 aaKnown RBP22.75■■□□□ 1.23
NPAS3-201ENST00000346562 THUMPD1Q9NXG2 353 aaKnown RBP22.75■■□□□ 1.23
NPAS3-201ENST00000346562 A0A0U1RQJ8 604 aa22.75■■□□□ 1.23
NPAS3-201ENST00000346562 OR4F21O95013 312 aa22.75■■□□□ 1.23
NPAS3-201ENST00000346562 PGRP06401 933 aa22.75■■□□□ 1.23
NPAS3-201ENST00000346562 ACVR2AP27037 513 aa22.75■■□□□ 1.23
NPAS3-201ENST00000346562 PTP4A2Q12974 167 aa22.75■■□□□ 1.23
NPAS3-201ENST00000346562 ADNP2Q6IQ32 1131 aa22.75■■□□□ 1.23
NPAS3-201ENST00000346562 PLET1Q6UQ28 207 aa22.75■■□□□ 1.23
NPAS3-201ENST00000346562 LAPTM4BQ86VI4 370 aa22.75■■□□□ 1.23
NPAS3-201ENST00000346562 DPYSL5Q9BPU6 564 aa22.75■■□□□ 1.23
NPAS3-201ENST00000346562 WDR26Q9H7D7 661 aa22.75■■□□□ 1.23
NPAS3-201ENST00000346562 MOCS1Q9NZB8 636 aa22.75■■□□□ 1.23
NPAS3-201ENST00000346562 A0A075B6Q4 140 aa22.75■■□□□ 1.23
NPAS3-201ENST00000346562 CFIP05156 583 aa22.75■■□□□ 1.23
NPAS3-201ENST00000346562 CD2P06729 351 aa22.75■■□□□ 1.23
NPAS3-201ENST00000346562 HNRNPDQ14103 355 aaKnown RBP22.75■■□□□ 1.23
NPAS3-201ENST00000346562 PACS2Q86VP3 889 aa22.75■■□□□ 1.23
NPAS3-201ENST00000346562 SPATA22Q8NHS9 363 aa22.75■■□□□ 1.23
NPAS3-201ENST00000346562 PSMG2Q969U7 264 aa22.75■■□□□ 1.23
NPAS3-201ENST00000346562 TBC1D24Q9ULP9 559 aa22.75■■□□□ 1.23
NPAS3-201ENST00000346562 NPHS1O60500 1241 aa22.74■■□□□ 1.23
NPAS3-201ENST00000346562 NCBP2P52298 156 aaKnown RBP eCLIP22.74■■□□□ 1.23
NPAS3-201ENST00000346562 PLGLB1Q02325 96 aa22.74■■□□□ 1.23
NPAS3-201ENST00000346562 METTL21CQ5VZV1 264 aa22.74■■□□□ 1.23
NPAS3-201ENST00000346562 CYP2U1Q7Z449 544 aa22.74■■□□□ 1.23
NPAS3-201ENST00000346562 RASGRP3Q8IV61 690 aa22.74■■□□□ 1.23
NPAS3-201ENST00000346562 ALG3Q92685 438 aa22.74■■□□□ 1.23
NPAS3-201ENST00000346562 FKBP14Q9NWM8 211 aa22.74■■□□□ 1.23
NPAS3-201ENST00000346562 CPSF4LA6NMK7 179 aaKnown RBP22.74■■□□□ 1.23
NPAS3-201ENST00000346562 GNAZP19086 355 aa22.74■■□□□ 1.23
NPAS3-201ENST00000346562 NMBRP28336 390 aa22.74■■□□□ 1.23
NPAS3-201ENST00000346562 CCR8P51685 355 aa22.74■■□□□ 1.23
NPAS3-201ENST00000346562 CRISP3P54108 245 aa22.74■■□□□ 1.23
NPAS3-201ENST00000346562 DAOAP59103 153 aa22.74■■□□□ 1.23
NPAS3-201ENST00000346562 ADGRD1Q6QNK2 874 aa22.74■■□□□ 1.23
NPAS3-201ENST00000346562 MPP5Q8N3R9 675 aa22.74■■□□□ 1.23
NPAS3-201ENST00000346562 GLB1L3Q8NCI6 653 aaPredicted RBP22.74■■□□□ 1.23
NPAS3-201ENST00000346562 PNO1Q9NRX1 252 aaKnown RBP22.74■■□□□ 1.23
NPAS3-201ENST00000346562 EIF2B4Q9UI10 523 aaKnown RBP22.74■■□□□ 1.23
NPAS3-201ENST00000346562 PIM1P11309 404 aaPredicted RBP22.74■■□□□ 1.23
NPAS3-201ENST00000346562 LILRA4P59901 499 aa22.74■■□□□ 1.23
NPAS3-201ENST00000346562 GFOD2Q3B7J2 385 aa22.74■■□□□ 1.23
NPAS3-201ENST00000346562 ALG1LQ6GMV1 187 aa22.74■■□□□ 1.23
NPAS3-201ENST00000346562 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP22.74■■□□□ 1.23
NPAS3-201ENST00000346562 ZNF570Q96NI8 536 aa22.74■■□□□ 1.23
NPAS3-201ENST00000346562 VSTM5A8MXK1 200 aa22.74■■□□□ 1.23
NPAS3-201ENST00000346562 TNFP01375 233 aa22.74■■□□□ 1.23
NPAS3-201ENST00000346562 AMZ1Q400G9 498 aa22.74■■□□□ 1.23
NPAS3-201ENST00000346562 UBAP2Q5T6F2 1119 aaKnown RBP22.74■■□□□ 1.23
NPAS3-201ENST00000346562 SLC22A15Q8IZD6 547 aa22.74■■□□□ 1.23
NPAS3-201ENST00000346562 SGCDQ92629 289 aa22.74■■□□□ 1.23
NPAS3-201ENST00000346562 NKD2Q969F2 451 aaPredicted RBP22.74■■□□□ 1.23
NPAS3-201ENST00000346562 MIPEPQ99797 713 aa22.74■■□□□ 1.23
NPAS3-201ENST00000346562 C11orf49Q9H6J7 331 aa22.74■■□□□ 1.23
NPAS3-201ENST00000346562 ZNF541Q9H0D2 1346 aa22.74■■□□□ 1.23
NPAS3-201ENST00000346562 CST3P01034 146 aaPredicted RBP22.74■■□□□ 1.23
NPAS3-201ENST00000346562 GSTT2BP0CG30 244 aa22.74■■□□□ 1.23
NPAS3-201ENST00000346562 ZNF20P17024 532 aa22.74■■□□□ 1.23
NPAS3-201ENST00000346562 NELFEP18615 380 aaKnown RBP22.74■■□□□ 1.23
NPAS3-201ENST00000346562 ACOT12Q8WYK0 555 aa22.74■■□□□ 1.23
NPAS3-201ENST00000346562 PCDHB11Q9Y5F2 797 aa22.74■■□□□ 1.23
NPAS3-201ENST00000346562 TSPAN5P62079 268 aa22.73■■□□□ 1.23
NPAS3-201ENST00000346562 CBX3Q13185 183 aa22.73■■□□□ 1.23
NPAS3-201ENST00000346562 AVL9Q8NBF6 648 aa22.73■■□□□ 1.23
NPAS3-201ENST00000346562 PDPRQ8NCN5 879 aa22.73■■□□□ 1.23
NPAS3-201ENST00000346562 FUBP3Q96I24 572 aaKnown RBP eCLIP22.73■■□□□ 1.23
NPAS3-201ENST00000346562 ELOA3DA6NLF2 546 aaPredicted RBP22.73■■□□□ 1.23
NPAS3-201ENST00000346562 GABRDO14764 452 aa22.73■■□□□ 1.23
NPAS3-201ENST00000346562 ANGPTL1O95841 491 aa22.73■■□□□ 1.23
NPAS3-201ENST00000346562 CSKP41240 450 aa22.73■■□□□ 1.23
NPAS3-201ENST00000346562 GPM6BQ13491 265 aa22.73■■□□□ 1.23
NPAS3-201ENST00000346562 ELOA3BQ3SY89 546 aa22.73■■□□□ 1.23
NPAS3-201ENST00000346562 MBOAT1Q6ZNC8 495 aa22.73■■□□□ 1.23
NPAS3-201ENST00000346562 ELOA3Q8NG57 546 aa22.73■■□□□ 1.23
NPAS3-201ENST00000346562 TCF7L1Q9HCS4 588 aa22.73■■□□□ 1.23
NPAS3-201ENST00000346562 DNAAF2Q9NVR5 837 aaKnown RBP22.73■■□□□ 1.23
NPAS3-201ENST00000346562 PSMD9O00233 223 aa22.73■■□□□ 1.23
NPAS3-201ENST00000346562 CBFA2T3O75081 653 aa22.73■■□□□ 1.23
NPAS3-201ENST00000346562 GADD45GO95257 159 aa22.73■■□□□ 1.23
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms