RNA–Protein interactions for RNA: ENST00000344627.10

SGCA-202, Transcript of sarcoglycan alpha, humanhuman

TSL 1 (best) BASIC

Gene SGCA, Length 1,057 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCA-202ENST00000344627 CERS6Q6ZMG9 384 aa12.09□□□□□ -0.47
SGCA-202ENST00000344627 PPP1R21Q6ZMI0 780 aa12.09□□□□□ -0.47
SGCA-202ENST00000344627 ASB18Q6ZVZ8 466 aa12.09□□□□□ -0.47
SGCA-202ENST00000344627 MICALCLQ6ZW33 695 aa12.09□□□□□ -0.47
SGCA-202ENST00000344627 LCN9Q8WX39 176 aa12.09□□□□□ -0.47
SGCA-202ENST00000344627 CDKN2AIPNLQ96HQ2 116 aa12.09□□□□□ -0.47
SGCA-202ENST00000344627 HES6Q96HZ4 224 aa12.09□□□□□ -0.47
SGCA-202ENST00000344627 LINC00615Q96LM1 132 aaPredicted RBP12.09□□□□□ -0.47
SGCA-202ENST00000344627 RMDN2Q96LZ7 410 aa12.09□□□□□ -0.47
SGCA-202ENST00000344627 TSGA10Q9BZW7 698 aa12.09□□□□□ -0.47
SGCA-202ENST00000344627 TWSG1Q9GZX9 223 aa12.09□□□□□ -0.47
SGCA-202ENST00000344627 KIR3DX1Q9H7L2 352 aa12.09□□□□□ -0.47
SGCA-202ENST00000344627 NLE1Q9NVX2 485 aaPredicted RBP12.09□□□□□ -0.47
SGCA-202ENST00000344627 SLC24A2Q9UI40 661 aa12.09□□□□□ -0.47
SGCA-202ENST00000344627 ZNF148Q9UQR1 794 aa12.09□□□□□ -0.47
SGCA-202ENST00000344627 TP53TG5Q9Y2B4 290 aa12.09□□□□□ -0.47
SGCA-202ENST00000344627 MAN2B2Q9Y2E5 1009 aa12.09□□□□□ -0.47
SGCA-202ENST00000344627 CAPN6Q9Y6Q1 641 aa12.09□□□□□ -0.47
SGCA-202ENST00000344627 MAST4O15021 2626 aa12.08□□□□□ -0.47
SGCA-202ENST00000344627 PIPSLA2A3N6 862 aa12.08□□□□□ -0.48
SGCA-202ENST00000344627 SGTAO43765 313 aa12.08□□□□□ -0.48
SGCA-202ENST00000344627 KRT86O43790 486 aa12.08□□□□□ -0.48
SGCA-202ENST00000344627 CPNE3O75131 537 aaKnown RBP12.08□□□□□ -0.48
SGCA-202ENST00000344627 VPS4BO75351 444 aa12.08□□□□□ -0.48
SGCA-202ENST00000344627 ZBTB11O95625 1053 aaPredicted RBP12.08□□□□□ -0.48
SGCA-202ENST00000344627 AP2A1O95782 977 aa12.08□□□□□ -0.48
SGCA-202ENST00000344627 KLK3P07288 261 aaPredicted RBP12.08□□□□□ -0.48
SGCA-202ENST00000344627 MSL3P1P0C860 447 aa12.08□□□□□ -0.48
SGCA-202ENST00000344627 CDH3P22223 829 aa12.08□□□□□ -0.48
SGCA-202ENST00000344627 F8A1P23610 371 aa12.08□□□□□ -0.48
SGCA-202ENST00000344627 ACRV1P26436 265 aa12.08□□□□□ -0.48
SGCA-202ENST00000344627 PTPN4P29074 926 aa12.08□□□□□ -0.48
SGCA-202ENST00000344627 TUBB4BP68371 445 aa12.08□□□□□ -0.48
SGCA-202ENST00000344627 PRKG2Q13237 762 aa12.08□□□□□ -0.48
SGCA-202ENST00000344627 KLF1Q13351 362 aaPredicted RBP12.08□□□□□ -0.48
SGCA-202ENST00000344627 TUBB2AQ13885 445 aa12.08□□□□□ -0.48
SGCA-202ENST00000344627 BRD3Q15059 726 aa12.08□□□□□ -0.48
SGCA-202ENST00000344627 IZUMO3Q5VZ72 239 aa12.08□□□□□ -0.48
SGCA-202ENST00000344627 CAPRIN2Q6IMN6 1127 aaKnown RBP12.08□□□□□ -0.48
SGCA-202ENST00000344627 PWWP2BQ6NUJ5 590 aa12.08□□□□□ -0.48
SGCA-202ENST00000344627 FBXO38Q6PIJ6 1188 aa12.08□□□□□ -0.48
SGCA-202ENST00000344627 LINC00523Q86TU6 105 aa12.08□□□□□ -0.48
SGCA-202ENST00000344627 D2HGDHQ8N465 521 aa12.08□□□□□ -0.48
SGCA-202ENST00000344627 RNF10Q8N5U6 811 aaKnown RBP12.08□□□□□ -0.48
SGCA-202ENST00000344627 CLDN19Q8N6F1 224 aa12.08□□□□□ -0.48
SGCA-202ENST00000344627 EFCAB3Q8N7B9 438 aa12.08□□□□□ -0.48
SGCA-202ENST00000344627 GALNT11Q8NCW6 608 aa12.08□□□□□ -0.48
SGCA-202ENST00000344627 PHC3Q8NDX5 983 aa12.08□□□□□ -0.48
SGCA-202ENST00000344627 OR52K1Q8NGK4 314 aa12.08□□□□□ -0.48
SGCA-202ENST00000344627 SLC35B2Q8TB61 432 aa12.08□□□□□ -0.48
SGCA-202ENST00000344627 C1orf54Q8WWF1 131 aa12.08□□□□□ -0.48
SGCA-202ENST00000344627 TUBB2BQ9BVA1 445 aa12.08□□□□□ -0.48
SGCA-202ENST00000344627 SRMSQ9H3Y6 488 aa12.08□□□□□ -0.48
SGCA-202ENST00000344627 COG4Q9H9E3 785 aa12.08□□□□□ -0.48
SGCA-202ENST00000344627 FANCEQ9HB96 536 aa12.08□□□□□ -0.48
SGCA-202ENST00000344627 FGF21Q9NSA1 209 aa12.08□□□□□ -0.48
SGCA-202ENST00000344627 VPS4AQ9UN37 437 aa12.08□□□□□ -0.48
SGCA-202ENST00000344627 C17orf113A0A1B0GUU1 675 aa12.07□□□□□ -0.48
SGCA-202ENST00000344627 AGAP14A8MT82 685 aa12.07□□□□□ -0.48
SGCA-202ENST00000344627 TIAF1O95411 115 aa12.07□□□□□ -0.48
SGCA-202ENST00000344627 CD63P08962 238 aa12.07□□□□□ -0.48
SGCA-202ENST00000344627 RAB40ALP0C0E4 278 aa12.07□□□□□ -0.48
SGCA-202ENST00000344627 MSNP26038 577 aaKnown RBP12.07□□□□□ -0.48
SGCA-202ENST00000344627 PDHA2P29803 388 aa12.07□□□□□ -0.48
SGCA-202ENST00000344627 STIP1P31948 543 aaKnown RBP12.07□□□□□ -0.48
SGCA-202ENST00000344627 PREPP48147 710 aa12.07□□□□□ -0.48
SGCA-202ENST00000344627 KPNA2P52292 529 aaKnown RBP12.07□□□□□ -0.48
SGCA-202ENST00000344627 DBN1Q16643 649 aa12.07□□□□□ -0.48
SGCA-202ENST00000344627 PAPD7Q5XG87 772 aaKnown RBP12.07□□□□□ -0.48
SGCA-202ENST00000344627 HOOK3Q86VS8 718 aa12.07□□□□□ -0.48
SGCA-202ENST00000344627 TMEM126BQ8IUX1 230 aa12.07□□□□□ -0.48
SGCA-202ENST00000344627 PIANPQ8IYJ0 282 aa12.07□□□□□ -0.48
SGCA-202ENST00000344627 ACVR1CQ8NER5 493 aa12.07□□□□□ -0.48
SGCA-202ENST00000344627 TBRG4Q969Z0 631 aaKnown RBP eCLIP12.07□□□□□ -0.48
SGCA-202ENST00000344627 PPM1MQ96MI6 270 aa12.07□□□□□ -0.48
SGCA-202ENST00000344627 C17orf62Q9BQA9 187 aa12.07□□□□□ -0.48
SGCA-202ENST00000344627 DPH2Q9BQC3 489 aaPredicted RBP12.07□□□□□ -0.48
SGCA-202ENST00000344627 HGH1Q9BTY7 390 aa12.07□□□□□ -0.48
SGCA-202ENST00000344627 ETNK1Q9HBU6 452 aa12.07□□□□□ -0.48
SGCA-202ENST00000344627 KCND1Q9NSA2 647 aa12.07□□□□□ -0.48
SGCA-202ENST00000344627 FARSAQ9Y285 508 aaKnown RBP12.07□□□□□ -0.48
SGCA-202ENST00000344627 CCDC162PA2VCL2 907 aa12.06□□□□□ -0.48
SGCA-202ENST00000344627 CDC14CA4D256 554 aa12.06□□□□□ -0.48
SGCA-202ENST00000344627 OR51F1A6NGY5 319 aa12.06□□□□□ -0.48
SGCA-202ENST00000344627 SLC9B1P1A6NJY1 282 aa12.06□□□□□ -0.48
SGCA-202ENST00000344627 H7C0S8 307 aa12.06□□□□□ -0.48
SGCA-202ENST00000344627 LIASO43766 372 aa12.06□□□□□ -0.48
SGCA-202ENST00000344627 GSTM1P09488 218 aa12.06□□□□□ -0.48
SGCA-202ENST00000344627 FDFT1P37268 417 aa12.06□□□□□ -0.48
SGCA-202ENST00000344627 GSTM4Q03013 218 aa12.06□□□□□ -0.48
SGCA-202ENST00000344627 CDH17Q12864 832 aa12.06□□□□□ -0.48
SGCA-202ENST00000344627 RPS6KA1Q15418 735 aa12.06□□□□□ -0.48
SGCA-202ENST00000344627 GPR19Q15760 415 aa12.06□□□□□ -0.48
SGCA-202ENST00000344627 IGFBP7Q16270 282 aa12.06□□□□□ -0.48
SGCA-202ENST00000344627 SYTL3Q4VX76 610 aa12.06□□□□□ -0.48
SGCA-202ENST00000344627 ZNF517Q6ZMY9 492 aaPredicted RBP12.06□□□□□ -0.48
SGCA-202ENST00000344627 SLC13A5Q86YT5 568 aaPredicted RBP12.06□□□□□ -0.48
SGCA-202ENST00000344627 KLHDC8BQ8IXV7 354 aa12.06□□□□□ -0.48
SGCA-202ENST00000344627 CCDC89Q8N998 374 aa12.06□□□□□ -0.48
SGCA-202ENST00000344627 OR6P1Q8NGX9 317 aa12.06□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms