RNA–Protein interactions for RNA: ENST00000344626.8

SMARCA4-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

TSL 1 (best) BASIC

Gene SMARCA4, Length 5,392 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-201ENST00000344626 TSSK3Q96PN8 268 aa16.12■□□□□ 0.17
SMARCA4-201ENST00000344626 CNTN6Q9UQ52 1028 aa16.12■□□□□ 0.17
SMARCA4-201ENST00000344626 OR51F1A6NGY5 319 aa16.12■□□□□ 0.17
SMARCA4-201ENST00000344626 CCNYL3P0C7X3 344 aa16.12■□□□□ 0.17
SMARCA4-201ENST00000344626 PSME3P61289 254 aa16.12■□□□□ 0.17
SMARCA4-201ENST00000344626 DEPDC1Q5TB30 811 aa16.12■□□□□ 0.17
SMARCA4-201ENST00000344626 CNBD2Q96M20 576 aa16.12■□□□□ 0.17
SMARCA4-201ENST00000344626 ANKHQ9HCJ1 492 aa16.12■□□□□ 0.17
SMARCA4-201ENST00000344626 ADGRE2Q9UHX3 823 aa16.12■□□□□ 0.17
SMARCA4-201ENST00000344626 PPIEQ9UNP9 301 aaKnown RBP16.12■□□□□ 0.17
SMARCA4-201ENST00000344626 CITO14578 2027 aa16.12■□□□□ 0.17
SMARCA4-201ENST00000344626 VPS26BQ4G0F5 336 aa16.12■□□□□ 0.17
SMARCA4-201ENST00000344626 ZDHHC13Q8IUH4 622 aa16.12■□□□□ 0.17
SMARCA4-201ENST00000344626 MICU2Q8IYU8 434 aa16.12■□□□□ 0.17
SMARCA4-201ENST00000344626 APCDD1Q8J025 514 aa16.12■□□□□ 0.17
SMARCA4-201ENST00000344626 OR4E2Q8NGC2 313 aa16.12■□□□□ 0.17
SMARCA4-201ENST00000344626 NACC2Q96BF6 587 aa16.12■□□□□ 0.17
SMARCA4-201ENST00000344626 PSKH2Q96QS6 385 aa16.12■□□□□ 0.17
SMARCA4-201ENST00000344626 C9orf16Q9BUW7 83 aa16.12■□□□□ 0.17
SMARCA4-201ENST00000344626 ADI1Q9BV57 179 aa16.12■□□□□ 0.17
SMARCA4-201ENST00000344626 IGLON5A6NGN9 336 aa16.12■□□□□ 0.17
SMARCA4-201ENST00000344626 SNX3O60493 162 aa16.12■□□□□ 0.17
SMARCA4-201ENST00000344626 KRT33AO76009 404 aa16.12■□□□□ 0.17
SMARCA4-201ENST00000344626 FYNP06241 537 aa16.12■□□□□ 0.17
SMARCA4-201ENST00000344626 PRPS2P11908 318 aa16.12■□□□□ 0.17
SMARCA4-201ENST00000344626 TAS2R50P59544 299 aa16.12■□□□□ 0.17
SMARCA4-201ENST00000344626 SCAPQ12770 1279 aa16.12■□□□□ 0.17
SMARCA4-201ENST00000344626 C1orf220Q5T0J3 134 aa16.12■□□□□ 0.17
SMARCA4-201ENST00000344626 CYP2R1Q6VVX0 501 aa16.12■□□□□ 0.17
SMARCA4-201ENST00000344626 ABHD13Q7L211 337 aa16.12■□□□□ 0.17
SMARCA4-201ENST00000344626 VN1R2Q8NFZ6 395 aa16.12■□□□□ 0.17
SMARCA4-201ENST00000344626 DNAJB14Q8TBM8 379 aa16.12■□□□□ 0.17
SMARCA4-201ENST00000344626 WDR92Q96MX6 357 aa16.12■□□□□ 0.17
SMARCA4-201ENST00000344626 EFCAB11Q9BUY7 163 aa16.12■□□□□ 0.17
SMARCA4-201ENST00000344626 PRRG4Q9BZD6 226 aa16.12■□□□□ 0.17
SMARCA4-201ENST00000344626 SAC3D1A6NKF1 404 aa16.11■□□□□ 0.17
SMARCA4-201ENST00000344626 K7EPI3 171 aa16.11■□□□□ 0.17
SMARCA4-201ENST00000344626 PAPSS2O95340 614 aaPredicted RBP16.11■□□□□ 0.17
SMARCA4-201ENST00000344626 CLDN19Q8N6F1 224 aa16.11■□□□□ 0.17
SMARCA4-201ENST00000344626 DCBLD1Q8N8Z6 715 aa16.11■□□□□ 0.17
SMARCA4-201ENST00000344626 OR2T3Q8NH03 318 aa16.11■□□□□ 0.17
SMARCA4-201ENST00000344626 SMPDL3AQ92484 453 aa16.11■□□□□ 0.17
SMARCA4-201ENST00000344626 PNPOQ9NVS9 261 aa16.11■□□□□ 0.17
SMARCA4-201ENST00000344626 SCML1Q9UN30 329 aa16.11■□□□□ 0.17
SMARCA4-201ENST00000344626 PRKD1Q15139 912 aaPredicted RBP16.11■□□□□ 0.17
SMARCA4-201ENST00000344626 LYSMD4Q5XG99 296 aa16.11■□□□□ 0.17
SMARCA4-201ENST00000344626 PQLC3Q8N755 202 aa16.11■□□□□ 0.17
SMARCA4-201ENST00000344626 HSPA12BQ96MM6 686 aa16.11■□□□□ 0.17
SMARCA4-201ENST00000344626 PEBP4Q96S96 227 aa16.11■□□□□ 0.17
SMARCA4-201ENST00000344626 MAGEE1Q9HCI5 957 aa16.11■□□□□ 0.17
SMARCA4-201ENST00000344626 LGALS13Q9UHV8 139 aa16.11■□□□□ 0.17
SMARCA4-201ENST00000344626 ERVK-11Q9UQG0 969 aa16.11■□□□□ 0.17
SMARCA4-201ENST00000344626 PEX12O00623 359 aa16.11■□□□□ 0.17
SMARCA4-201ENST00000344626 NPHS1O60500 1241 aa16.11■□□□□ 0.17
SMARCA4-201ENST00000344626 SASH3O75995 380 aa16.11■□□□□ 0.17
SMARCA4-201ENST00000344626 TMEM63AO94886 807 aa16.11■□□□□ 0.17
SMARCA4-201ENST00000344626 IGFALSP35858 605 aa16.11■□□□□ 0.17
SMARCA4-201ENST00000344626 ZNF155Q12901 538 aaPredicted RBP16.11■□□□□ 0.17
SMARCA4-201ENST00000344626 CAPRIN2Q6IMN6 1127 aaKnown RBP16.11■□□□□ 0.17
SMARCA4-201ENST00000344626 KLHDC10Q6PID8 442 aa16.11■□□□□ 0.17
SMARCA4-201ENST00000344626 CRTC1Q6UUV9 634 aa16.11■□□□□ 0.17
SMARCA4-201ENST00000344626 SLC36A4Q6YBV0 504 aa16.11■□□□□ 0.17
SMARCA4-201ENST00000344626 RALGPS2Q86X27 583 aaPredicted RBP16.11■□□□□ 0.17
SMARCA4-201ENST00000344626 RNF148Q8N7C7 305 aa16.11■□□□□ 0.17
SMARCA4-201ENST00000344626 FIBINQ8TAL6 211 aa16.11■□□□□ 0.17
SMARCA4-201ENST00000344626 PTCD3Q96EY7 689 aaKnown RBP16.11■□□□□ 0.17
SMARCA4-201ENST00000344626 EPB41L4BQ9H329 900 aa16.11■□□□□ 0.17
SMARCA4-201ENST00000344626 USE1Q9NZ43 259 aa16.11■□□□□ 0.17
SMARCA4-201ENST00000344626 TMEM150CB9EJG8 249 aa16.11■□□□□ 0.17
SMARCA4-201ENST00000344626 EDN1P05305 212 aa16.11■□□□□ 0.17
SMARCA4-201ENST00000344626 HNRNPKP61978 463 aaKnown RBP eCLIP16.11■□□□□ 0.17
SMARCA4-201ENST00000344626 RPP38P78345 283 aaKnown RBP16.11■□□□□ 0.17
SMARCA4-201ENST00000344626 FBXO30Q8TB52 745 aa16.11■□□□□ 0.17
SMARCA4-201ENST00000344626 TFGQ92734 400 aaPredicted RBP16.11■□□□□ 0.17
SMARCA4-201ENST00000344626 TNRC6CQ9HCJ0 1690 aaKnown RBP16.1■□□□□ 0.17
SMARCA4-201ENST00000344626 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa16.1■□□□□ 0.17
SMARCA4-201ENST00000344626 A0A0J9YVX5 310 aa16.1■□□□□ 0.17
SMARCA4-201ENST00000344626 PLK4O00444 970 aa16.1■□□□□ 0.17
SMARCA4-201ENST00000344626 C5AR1P21730 350 aa16.1■□□□□ 0.17
SMARCA4-201ENST00000344626 IL5RAQ01344 420 aa16.1■□□□□ 0.17
SMARCA4-201ENST00000344626 HEATR4Q86WZ0 1026 aa16.1■□□□□ 0.17
SMARCA4-201ENST00000344626 TMEFF1Q8IYR6 380 aa16.1■□□□□ 0.17
SMARCA4-201ENST00000344626 CAMKVQ8NCB2 501 aa16.1■□□□□ 0.17
SMARCA4-201ENST00000344626 HM13Q8TCT9 377 aa16.1■□□□□ 0.17
SMARCA4-201ENST00000344626 TSC22D3Q99576 134 aa16.1■□□□□ 0.17
SMARCA4-201ENST00000344626 ZDBF2Q9HCK1 2354 aa16.1■□□□□ 0.17
SMARCA4-201ENST00000344626 THEGLP0DJG4 465 aa16.1■□□□□ 0.17
SMARCA4-201ENST00000344626 LAMP2P13473 410 aa16.1■□□□□ 0.17
SMARCA4-201ENST00000344626 MPSTP25325 297 aa16.1■□□□□ 0.17
SMARCA4-201ENST00000344626 ITPKBP27987 946 aa16.1■□□□□ 0.17
SMARCA4-201ENST00000344626 DSC1Q08554 894 aa16.1■□□□□ 0.17
SMARCA4-201ENST00000344626 ARMC3Q5W041 872 aa16.1■□□□□ 0.17
SMARCA4-201ENST00000344626 STK32CQ86UX6 486 aa16.1■□□□□ 0.17
SMARCA4-201ENST00000344626 FBXW2Q9UKT8 454 aa16.1■□□□□ 0.17
SMARCA4-201ENST00000344626 PSMD4P55036 377 aaKnown RBP16.1■□□□□ 0.17
SMARCA4-201ENST00000344626 KCNJ11Q14654 390 aa16.1■□□□□ 0.17
SMARCA4-201ENST00000344626 PRAMEF13Q5VWM6 474 aa16.1■□□□□ 0.17
SMARCA4-201ENST00000344626 GAL3ST4Q96RP7 486 aa16.1■□□□□ 0.17
SMARCA4-201ENST00000344626 NLE1Q9NVX2 485 aaPredicted RBP16.1■□□□□ 0.17
SMARCA4-201ENST00000344626 ACSL5Q9ULC5 683 aa16.1■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms