RNA–Protein interactions for RNA: ENST00000344114.8

HERPUD1-202, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 1 (best) BASIC

Gene HERPUD1, Length 1,388 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-202ENST00000344114 DKK3Q9UBP4 350 aa13.27□□□□□ -0.29
HERPUD1-202ENST00000344114 COL27A1Q8IZC6 1860 aaPredicted RBP13.26□□□□□ -0.29
HERPUD1-202ENST00000344114 A0A0G2JND7 137 aa13.26□□□□□ -0.29
HERPUD1-202ENST00000344114 H3BMM5 538 aa13.26□□□□□ -0.29
HERPUD1-202ENST00000344114 PRMT5O14744 637 aaPredicted RBP13.26□□□□□ -0.29
HERPUD1-202ENST00000344114 MAGEC1O60732 1142 aa13.26□□□□□ -0.29
HERPUD1-202ENST00000344114 DNAJC6O75061 913 aa13.26□□□□□ -0.29
HERPUD1-202ENST00000344114 LEFTY1O75610 366 aa13.26□□□□□ -0.29
HERPUD1-202ENST00000344114 MT-CO3P00414 261 aa13.26□□□□□ -0.29
HERPUD1-202ENST00000344114 VIPR1P32241 457 aa13.26□□□□□ -0.29
HERPUD1-202ENST00000344114 DRD3P35462 400 aa13.26□□□□□ -0.29
HERPUD1-202ENST00000344114 PSMD8P48556 350 aa13.26□□□□□ -0.29
HERPUD1-202ENST00000344114 CDKN1CP49918 316 aaPredicted RBP13.26□□□□□ -0.29
HERPUD1-202ENST00000344114 HK2P52789 917 aa13.26□□□□□ -0.29
HERPUD1-202ENST00000344114 PCBP4P57723 403 aaKnown RBP13.26□□□□□ -0.29
HERPUD1-202ENST00000344114 CORO7P57737 925 aa13.26□□□□□ -0.29
HERPUD1-202ENST00000344114 ATP6V0D1P61421 351 aa13.26□□□□□ -0.29
HERPUD1-202ENST00000344114 E2F1Q01094 437 aa13.26□□□□□ -0.29
HERPUD1-202ENST00000344114 NFATC2Q13469 925 aa13.26□□□□□ -0.29
HERPUD1-202ENST00000344114 ARHGEF7Q14155 803 aa13.26□□□□□ -0.29
HERPUD1-202ENST00000344114 RCN2Q14257 317 aa13.26□□□□□ -0.29
HERPUD1-202ENST00000344114 LRRC66Q68CR7 880 aa13.26□□□□□ -0.29
HERPUD1-202ENST00000344114 FAM151BQ6UXP7 276 aa13.26□□□□□ -0.29
HERPUD1-202ENST00000344114 TSPAN33Q86UF1 283 aa13.26□□□□□ -0.29
HERPUD1-202ENST00000344114 RBFAQ8N0V3 343 aa13.26□□□□□ -0.29
HERPUD1-202ENST00000344114 NKAPQ8N5F7 415 aaKnown RBP13.26□□□□□ -0.29
HERPUD1-202ENST00000344114 ANKRD49Q8WVL7 239 aa13.26□□□□□ -0.29
HERPUD1-202ENST00000344114 KCNJ9Q92806 393 aa13.26□□□□□ -0.29
HERPUD1-202ENST00000344114 ZNF578Q96N58 590 aaPredicted RBP13.26□□□□□ -0.29
HERPUD1-202ENST00000344114 BIRC8Q96P09 236 aa13.26□□□□□ -0.29
HERPUD1-202ENST00000344114 SORT1Q99523 831 aa13.26□□□□□ -0.29
HERPUD1-202ENST00000344114 GATA5Q9BWX5 397 aaPredicted RBP13.26□□□□□ -0.29
HERPUD1-202ENST00000344114 DERL2Q9GZP9 239 aa13.26□□□□□ -0.29
HERPUD1-202ENST00000344114 WWP1Q9H0M0 922 aa13.26□□□□□ -0.29
HERPUD1-202ENST00000344114 P2RY12Q9H244 342 aa13.26□□□□□ -0.29
HERPUD1-202ENST00000344114 ASB8Q9H765 288 aa13.26□□□□□ -0.29
HERPUD1-202ENST00000344114 RAD18Q9NS91 495 aa13.26□□□□□ -0.29
HERPUD1-202ENST00000344114 PKD2L2Q9NZM6 624 aa13.26□□□□□ -0.29
HERPUD1-202ENST00000344114 NFKBIL1Q9UBC1 381 aaPredicted RBP13.26□□□□□ -0.29
HERPUD1-202ENST00000344114 CRLS1Q9UJA2 301 aa13.26□□□□□ -0.29
HERPUD1-202ENST00000344114 GNPTGQ9UJJ9 305 aa13.26□□□□□ -0.29
HERPUD1-202ENST00000344114 DCTN4Q9UJW0 460 aa13.26□□□□□ -0.29
HERPUD1-202ENST00000344114 DNAJC16Q9Y2G8 782 aa13.26□□□□□ -0.29
HERPUD1-202ENST00000344114 OAS3Q9Y6K5 1087 aaKnown RBP13.26□□□□□ -0.29
HERPUD1-202ENST00000344114 TBC1D3DA0A087WVF3 549 aa13.25□□□□□ -0.29
HERPUD1-202ENST00000344114 TBC1D3IA0A087WXS9 549 aa13.25□□□□□ -0.29
HERPUD1-202ENST00000344114 TBC1D3EA0A087X179 549 aa13.25□□□□□ -0.29
HERPUD1-202ENST00000344114 TBC1D3KA0A087X1G2 549 aa13.25□□□□□ -0.29
HERPUD1-202ENST00000344114 A0A0U1RQS6 177 aa13.25□□□□□ -0.29
HERPUD1-202ENST00000344114 TBC1D3FA6NER0 549 aaPredicted RBP13.25□□□□□ -0.29
HERPUD1-202ENST00000344114 AGAP14A8MT82 685 aa13.25□□□□□ -0.29
HERPUD1-202ENST00000344114 TBC1D3LB9A6J9 549 aa13.25□□□□□ -0.29
HERPUD1-202ENST00000344114 TRIM38O00635 465 aa13.25□□□□□ -0.29
HERPUD1-202ENST00000344114 ITM2AO43736 263 aa13.25□□□□□ -0.29
HERPUD1-202ENST00000344114 DLX3O60479 287 aa13.25□□□□□ -0.29
HERPUD1-202ENST00000344114 NPHS1O60500 1241 aa13.25□□□□□ -0.29
HERPUD1-202ENST00000344114 LYPLA1O75608 230 aaPredicted RBP13.25□□□□□ -0.29
HERPUD1-202ENST00000344114 DXOO77932 396 aaKnown RBP13.25□□□□□ -0.29
HERPUD1-202ENST00000344114 HSPA4LO95757 839 aa13.25□□□□□ -0.29
HERPUD1-202ENST00000344114 PRNPP04156 253 aa13.25□□□□□ -0.29
HERPUD1-202ENST00000344114 TBC1D3HP0C7X1 549 aa13.25□□□□□ -0.29
HERPUD1-202ENST00000344114 CD1DP15813 335 aa13.25□□□□□ -0.29
HERPUD1-202ENST00000344114 TFEBP19484 476 aa13.25□□□□□ -0.29
HERPUD1-202ENST00000344114 LHCGRP22888 699 aa13.25□□□□□ -0.29
HERPUD1-202ENST00000344114 ACRV1P26436 265 aa13.25□□□□□ -0.29
HERPUD1-202ENST00000344114 NUDT1P36639 197 aa13.25□□□□□ -0.29
HERPUD1-202ENST00000344114 SKIV2L2P42285 1042 aaKnown RBP13.25□□□□□ -0.29
HERPUD1-202ENST00000344114 UCNP55089 124 aa13.25□□□□□ -0.29
HERPUD1-202ENST00000344114 TMPRSS3P57727 454 aa13.25□□□□□ -0.29
HERPUD1-202ENST00000344114 NFKB2Q00653 900 aa13.25□□□□□ -0.29
HERPUD1-202ENST00000344114 ZNF805Q5CZA5 627 aa13.25□□□□□ -0.29
HERPUD1-202ENST00000344114 CTSL3PQ5NE16 218 aa13.25□□□□□ -0.29
HERPUD1-202ENST00000344114 CDCP2Q5VXM1 449 aa13.25□□□□□ -0.29
HERPUD1-202ENST00000344114 TBC1D3GQ6DHY5 549 aa13.25□□□□□ -0.29
HERPUD1-202ENST00000344114 TBC1D3CQ6IPX1 549 aa13.25□□□□□ -0.29
HERPUD1-202ENST00000344114 TMEM207Q6UWW9 146 aa13.25□□□□□ -0.29
HERPUD1-202ENST00000344114 PIWIL4Q7Z3Z4 852 aaKnown RBP13.25□□□□□ -0.29
HERPUD1-202ENST00000344114 SERPINA9Q86WD7 417 aa13.25□□□□□ -0.29
HERPUD1-202ENST00000344114 TBC1D3Q8IZP1 549 aaPredicted RBP13.25□□□□□ -0.29
HERPUD1-202ENST00000344114 RHEBL1Q8TAI7 183 aa13.25□□□□□ -0.29
HERPUD1-202ENST00000344114 SNRNP27Q8WVK2 155 aaKnown RBP13.25□□□□□ -0.29
HERPUD1-202ENST00000344114 ULK4Q96C45 1275 aa13.25□□□□□ -0.29
HERPUD1-202ENST00000344114 LRRC37BQ96QE4 947 aa13.25□□□□□ -0.29
HERPUD1-202ENST00000344114 GPR21Q99679 349 aa13.25□□□□□ -0.29
HERPUD1-202ENST00000344114 SEMA4CQ9C0C4 833 aa13.25□□□□□ -0.29
HERPUD1-202ENST00000344114 C20orf27Q9GZN8 174 aa13.25□□□□□ -0.29
HERPUD1-202ENST00000344114 DRC3Q9H069 523 aa13.25□□□□□ -0.29
HERPUD1-202ENST00000344114 CLPBQ9H078 707 aa13.25□□□□□ -0.29
HERPUD1-202ENST00000344114 TFB2MQ9H5Q4 396 aaKnown RBP13.25□□□□□ -0.29
HERPUD1-202ENST00000344114 KCNK13Q9HB14 408 aa13.25□□□□□ -0.29
HERPUD1-202ENST00000344114 IL26Q9NPH9 171 aa13.25□□□□□ -0.29
HERPUD1-202ENST00000344114 B4GALT6Q9UBX8 382 aa13.25□□□□□ -0.29
HERPUD1-202ENST00000344114 TRMT6Q9UJA5 497 aaKnown RBP13.25□□□□□ -0.29
HERPUD1-202ENST00000344114 MYO18BQ8IUG5 2567 aa13.25□□□□□ -0.29
HERPUD1-202ENST00000344114 E5RI56 91 aa13.24□□□□□ -0.29
HERPUD1-202ENST00000344114 SIGLEC6O43699 453 aa13.24□□□□□ -0.29
HERPUD1-202ENST00000344114 SMIM24O75264 130 aa13.24□□□□□ -0.29
HERPUD1-202ENST00000344114 UBOX5O94941 541 aa13.24□□□□□ -0.29
HERPUD1-202ENST00000344114 CTSLP07711 333 aa13.24□□□□□ -0.29
HERPUD1-202ENST00000344114 ALOX15P16050 662 aaPredicted RBP13.24□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms