RNA–Protein interactions for RNA: ENST00000343765.6

VIPAS39-202, Transcript of VPS33B interacting protein, apical-basolateral polarity regulator, spe-39 homolog, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VIPAS39, Length 2,761 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIPAS39-202ENST00000343765 TTC33Q6PID6 262 aaPredicted RBP14.6□□□□□ -0.07
VIPAS39-202ENST00000343765 SLC39A5Q6ZMH5 540 aa14.6□□□□□ -0.07
VIPAS39-202ENST00000343765 LIX1Q8N485 282 aa14.6□□□□□ -0.07
VIPAS39-202ENST00000343765 PPP3R2Q96LZ3 170 aa14.6□□□□□ -0.07
VIPAS39-202ENST00000343765 SEZ6LQ9BYH1 1024 aa14.6□□□□□ -0.07
VIPAS39-202ENST00000343765 VAPAQ9P0L0 249 aa14.6□□□□□ -0.07
VIPAS39-202ENST00000343765 NIPSNAP3AQ9UFN0 247 aaPredicted RBP14.6□□□□□ -0.07
VIPAS39-202ENST00000343765 DMTF1Q9Y222 760 aa14.6□□□□□ -0.07
VIPAS39-202ENST00000343765 K7EPI3 171 aa14.6□□□□□ -0.07
VIPAS39-202ENST00000343765 RGS14O43566 566 aa14.6□□□□□ -0.07
VIPAS39-202ENST00000343765 ULK1O75385 1050 aa14.6□□□□□ -0.07
VIPAS39-202ENST00000343765 LDLRP01130 860 aa14.6□□□□□ -0.07
VIPAS39-202ENST00000343765 SRCP12931 536 aa14.6□□□□□ -0.07
VIPAS39-202ENST00000343765 HTR1EP28566 365 aa14.6□□□□□ -0.07
VIPAS39-202ENST00000343765 TMTC4Q5T4D3 741 aa14.6□□□□□ -0.07
VIPAS39-202ENST00000343765 MACC1Q6ZN28 852 aa14.6□□□□□ -0.07
VIPAS39-202ENST00000343765 FIG4Q92562 907 aa14.6□□□□□ -0.07
VIPAS39-202ENST00000343765 ISG20Q96AZ6 181 aaKnown RBP14.6□□□□□ -0.07
VIPAS39-202ENST00000343765 HTATIP2Q9BUP3 242 aa14.6□□□□□ -0.07
VIPAS39-202ENST00000343765 CFHR5Q9BXR6 569 aa14.6□□□□□ -0.07
VIPAS39-202ENST00000343765 MUC13Q9H3R2 512 aa14.6□□□□□ -0.07
VIPAS39-202ENST00000343765 ARL15Q9NXU5 204 aa14.6□□□□□ -0.07
VIPAS39-202ENST00000343765 FAM8A1Q9UBU6 413 aa14.6□□□□□ -0.07
VIPAS39-202ENST00000343765 MBD1Q9UIS9 605 aaPredicted RBP14.6□□□□□ -0.07
VIPAS39-202ENST00000343765 EIF3LQ9Y262 564 aaKnown RBP14.6□□□□□ -0.07
VIPAS39-202ENST00000343765 CCL27Q9Y4X3 112 aa14.6□□□□□ -0.07
VIPAS39-202ENST00000343765 COL4A6Q14031 1691 aa14.59□□□□□ -0.07
VIPAS39-202ENST00000343765 USP34Q70CQ2 3546 aa14.59□□□□□ -0.07
VIPAS39-202ENST00000343765 LRG1P02750 347 aa14.59□□□□□ -0.07
VIPAS39-202ENST00000343765 UGT2B4P06133 528 aa14.59□□□□□ -0.07
VIPAS39-202ENST00000343765 FCGR1AP12314 374 aa14.59□□□□□ -0.07
VIPAS39-202ENST00000343765 EPB42P16452 691 aa14.59□□□□□ -0.07
VIPAS39-202ENST00000343765 LHCGRP22888 699 aa14.59□□□□□ -0.07
VIPAS39-202ENST00000343765 MAPK8P45983 427 aa14.59□□□□□ -0.07
VIPAS39-202ENST00000343765 HSPA14Q0VDF9 509 aa14.59□□□□□ -0.07
VIPAS39-202ENST00000343765 MAP7Q14244 749 aa14.59□□□□□ -0.07
VIPAS39-202ENST00000343765 SPANXN4Q5MJ08 99 aa14.59□□□□□ -0.07
VIPAS39-202ENST00000343765 SULT1C3Q6IMI6 304 aa14.59□□□□□ -0.07
VIPAS39-202ENST00000343765 TMEM214Q6NUQ4 689 aaKnown RBP14.59□□□□□ -0.07
VIPAS39-202ENST00000343765 B3GNT6Q6ZMB0 384 aa14.59□□□□□ -0.07
VIPAS39-202ENST00000343765 FAM217AQ8IXS0 508 aa14.59□□□□□ -0.07
VIPAS39-202ENST00000343765 RGL4Q8IZJ4 473 aa14.59□□□□□ -0.07
VIPAS39-202ENST00000343765 DPP10Q8N608 796 aa14.59□□□□□ -0.07
VIPAS39-202ENST00000343765 MFSD2AQ8NA29 543 aa14.59□□□□□ -0.07
VIPAS39-202ENST00000343765 SLC13A3Q8WWT9 602 aa14.59□□□□□ -0.07
VIPAS39-202ENST00000343765 ZBTB18Q99592 522 aa14.59□□□□□ -0.07
VIPAS39-202ENST00000343765 CORO1BQ9BR76 489 aa14.59□□□□□ -0.07
VIPAS39-202ENST00000343765 THUMPD3Q9BV44 507 aaKnown RBP14.59□□□□□ -0.07
VIPAS39-202ENST00000343765 CLK4Q9HAZ1 481 aaKnown RBP14.59□□□□□ -0.07
VIPAS39-202ENST00000343765 CCL26Q9Y258 94 aa14.59□□□□□ -0.07
VIPAS39-202ENST00000343765 LEFTY2O00292 366 aa14.59□□□□□ -0.07
VIPAS39-202ENST00000343765 MTX2O75431 263 aa14.59□□□□□ -0.07
VIPAS39-202ENST00000343765 RASAL1O95294 804 aa14.59□□□□□ -0.07
VIPAS39-202ENST00000343765 HLA-FP30511 346 aa14.59□□□□□ -0.07
VIPAS39-202ENST00000343765 TTLL9Q3SXZ7 439 aa14.59□□□□□ -0.07
VIPAS39-202ENST00000343765 SPATS1Q496A3 300 aa14.59□□□□□ -0.07
VIPAS39-202ENST00000343765 DDX53Q86TM3 631 aaKnown RBP14.59□□□□□ -0.07
VIPAS39-202ENST00000343765 REM2Q8IYK8 340 aaPredicted RBP14.59□□□□□ -0.07
VIPAS39-202ENST00000343765 TBC1D21Q8IYX1 336 aa14.59□□□□□ -0.07
VIPAS39-202ENST00000343765 PACRGLQ8N7B6 248 aa14.59□□□□□ -0.07
VIPAS39-202ENST00000343765 GOLM1Q8NBJ4 401 aa14.59□□□□□ -0.07
VIPAS39-202ENST00000343765 TBCDQ9BTW9 1192 aa14.59□□□□□ -0.07
VIPAS39-202ENST00000343765 DPY30Q9C005 99 aa14.59□□□□□ -0.07
VIPAS39-202ENST00000343765 PTTG2Q9NZH5 202 aa14.59□□□□□ -0.07
VIPAS39-202ENST00000343765 KCNH1O95259 989 aa14.58□□□□□ -0.07
VIPAS39-202ENST00000343765 JAK1P23458 1154 aa14.58□□□□□ -0.07
VIPAS39-202ENST00000343765 CCR7P32248 378 aa14.58□□□□□ -0.07
VIPAS39-202ENST00000343765 SNRPD1P62314 119 aaKnown RBP14.58□□□□□ -0.07
VIPAS39-202ENST00000343765 B4GALNT1Q00973 533 aa14.58□□□□□ -0.07
VIPAS39-202ENST00000343765 PWP1Q13610 501 aa14.58□□□□□ -0.07
VIPAS39-202ENST00000343765 GTDC1Q4AE62 458 aa14.58□□□□□ -0.07
VIPAS39-202ENST00000343765 LYPLAL1Q5VWZ2 237 aa14.58□□□□□ -0.07
VIPAS39-202ENST00000343765 TBPL2Q6SJ96 375 aa14.58□□□□□ -0.07
VIPAS39-202ENST00000343765 HTR3DQ70Z44 454 aa14.58□□□□□ -0.07
VIPAS39-202ENST00000343765 ANKRD33Q7Z3H0 272 aa14.58□□□□□ -0.07
VIPAS39-202ENST00000343765 PROSER1Q86XN7 944 aa14.58□□□□□ -0.07
VIPAS39-202ENST00000343765 OR10A6Q8NH74 314 aa14.58□□□□□ -0.07
VIPAS39-202ENST00000343765 FIBINQ8TAL6 211 aa14.58□□□□□ -0.07
VIPAS39-202ENST00000343765 PYCR2Q96C36 320 aa14.58□□□□□ -0.07
VIPAS39-202ENST00000343765 ZNF689Q96CS4 500 aaPredicted RBP14.58□□□□□ -0.07
VIPAS39-202ENST00000343765 COPS8Q99627 209 aa14.58□□□□□ -0.07
VIPAS39-202ENST00000343765 BEGAINQ9BUH8 593 aa14.58□□□□□ -0.07
VIPAS39-202ENST00000343765 IKZF5Q9H5V7 419 aa14.58□□□□□ -0.07
VIPAS39-202ENST00000343765 ACTR8Q9H981 624 aa14.58□□□□□ -0.07
VIPAS39-202ENST00000343765 LRTM1Q9HBL6 345 aa14.58□□□□□ -0.07
VIPAS39-202ENST00000343765 PAK6Q9NQU5 681 aaPredicted RBP14.58□□□□□ -0.07
VIPAS39-202ENST00000343765 TMEM39AQ9NV64 488 aa14.58□□□□□ -0.07
VIPAS39-202ENST00000343765 PADI4Q9UM07 663 aa14.58□□□□□ -0.07
VIPAS39-202ENST00000343765 CROCCQ5TZA2 2017 aa14.58□□□□□ -0.07
VIPAS39-202ENST00000343765 MYOFQ9NZM1 2061 aa14.58□□□□□ -0.08
VIPAS39-202ENST00000343765 TRAV19A0A0A6YYK7 116 aa14.58□□□□□ -0.08
VIPAS39-202ENST00000343765 MANBAO00462 879 aa14.58□□□□□ -0.08
VIPAS39-202ENST00000343765 CLOCKO15516 846 aa14.58□□□□□ -0.08
VIPAS39-202ENST00000343765 STK16O75716 305 aa14.58□□□□□ -0.08
VIPAS39-202ENST00000343765 SNAP29O95721 258 aa14.58□□□□□ -0.08
VIPAS39-202ENST00000343765 PCSK6P29122 969 aa14.58□□□□□ -0.08
VIPAS39-202ENST00000343765 NSG1P42857 185 aa14.58□□□□□ -0.08
VIPAS39-202ENST00000343765 RPIAP49247 311 aa14.58□□□□□ -0.08
VIPAS39-202ENST00000343765 NEK2P51955 445 aa14.58□□□□□ -0.08
VIPAS39-202ENST00000343765 PTSQ03393 145 aa14.58□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms