RNA–Protein interactions for RNA: ENST00000343483.6

HOXA9-201, Transcript of homeobox A9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXA9, Length 2,060 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA9-201ENST00000343483 IDO1P14902 403 aa18.23■□□□□ 0.51
HOXA9-201ENST00000343483 FCARP24071 287 aa18.23■□□□□ 0.51
HOXA9-201ENST00000343483 DIO3P55073 304 aa18.23■□□□□ 0.51
HOXA9-201ENST00000343483 ADGRE1Q14246 886 aa18.23■□□□□ 0.51
HOXA9-201ENST00000343483 HNRNPA1L2Q32P51 320 aaKnown RBP18.23■□□□□ 0.51
HOXA9-201ENST00000343483 C9orf64Q5T6V5 341 aa18.23■□□□□ 0.51
HOXA9-201ENST00000343483 LAYNQ6UX15 382 aa18.23■□□□□ 0.51
HOXA9-201ENST00000343483 VRK3Q8IV63 474 aa18.23■□□□□ 0.51
HOXA9-201ENST00000343483 APLFQ8IW19 511 aaPredicted RBP18.23■□□□□ 0.51
HOXA9-201ENST00000343483 BEND7Q8N7W2 519 aaPredicted RBP18.23■□□□□ 0.51
HOXA9-201ENST00000343483 ICA1LQ8NDH6 482 aa18.23■□□□□ 0.51
HOXA9-201ENST00000343483 ERLEC1Q96DZ1 483 aa18.23■□□□□ 0.51
HOXA9-201ENST00000343483 HBEGFQ99075 208 aa18.23■□□□□ 0.51
HOXA9-201ENST00000343483 CDX2Q99626 313 aaPredicted RBP18.23■□□□□ 0.51
HOXA9-201ENST00000343483 LMAN2LQ9H0V9 348 aa18.23■□□□□ 0.51
HOXA9-201ENST00000343483 RDH14Q9HBH5 336 aa18.23■□□□□ 0.51
HOXA9-201ENST00000343483 SPAG4Q9NPE6 437 aa18.23■□□□□ 0.51
HOXA9-201ENST00000343483 RIC8BQ9NVN3 520 aa18.23■□□□□ 0.51
HOXA9-201ENST00000343483 EPS15L1Q9UBC2 864 aa18.23■□□□□ 0.51
HOXA9-201ENST00000343483 SUCOQ9UBS9 1254 aaKnown RBP18.23■□□□□ 0.51
HOXA9-201ENST00000343483 FAM8A1Q9UBU6 413 aa18.23■□□□□ 0.51
HOXA9-201ENST00000343483 EDDM13A0A1B0GTR0 161 aa18.22■□□□□ 0.51
HOXA9-201ENST00000343483 RPIAP49247 311 aa18.22■□□□□ 0.51
HOXA9-201ENST00000343483 TRAF3Q13114 568 aa18.22■□□□□ 0.51
HOXA9-201ENST00000343483 EIF4HQ15056 248 aaKnown RBP18.22■□□□□ 0.51
HOXA9-201ENST00000343483 PDGFRLQ15198 375 aa18.22■□□□□ 0.51
HOXA9-201ENST00000343483 OR52E8Q6IFG1 317 aa18.22■□□□□ 0.51
HOXA9-201ENST00000343483 OGFOD2Q6N063 350 aa18.22■□□□□ 0.51
HOXA9-201ENST00000343483 IL27RAQ6UWB1 636 aa18.22■□□□□ 0.51
HOXA9-201ENST00000343483 UBE2R2Q712K3 238 aaPredicted RBP18.22■□□□□ 0.51
HOXA9-201ENST00000343483 SPATA19Q7Z5L4 167 aa18.22■□□□□ 0.51
HOXA9-201ENST00000343483 TECPR1Q7Z6L1 1165 aa18.22■□□□□ 0.51
HOXA9-201ENST00000343483 MILR1Q7Z6M3 343 aa18.22■□□□□ 0.51
HOXA9-201ENST00000343483 GPR149Q86SP6 731 aa18.22■□□□□ 0.51
HOXA9-201ENST00000343483 DDHD1Q8NEL9 900 aa18.22■□□□□ 0.51
HOXA9-201ENST00000343483 OR8D1Q8WZ84 308 aa18.22■□□□□ 0.51
HOXA9-201ENST00000343483 ELMO1Q92556 727 aa18.22■□□□□ 0.51
HOXA9-201ENST00000343483 AP2M1Q96CW1 435 aa18.22■□□□□ 0.51
HOXA9-201ENST00000343483 COPS7BQ9H9Q2 264 aaPredicted RBP18.22■□□□□ 0.51
HOXA9-201ENST00000343483 ZFP14Q9HCL3 533 aa18.22■□□□□ 0.51
HOXA9-201ENST00000343483 SDR39U1Q9NRG7 319 aaPredicted RBP18.22■□□□□ 0.51
HOXA9-201ENST00000343483 CROTQ9UKG9 612 aa18.22■□□□□ 0.51
HOXA9-201ENST00000343483 ANKRD12Q6UB98 2062 aa18.22■□□□□ 0.51
HOXA9-201ENST00000343483 PLXNB3Q9ULL4 1909 aa18.22■□□□□ 0.51
HOXA9-201ENST00000343483 TBC1D3BA6NDS4 549 aa18.22■□□□□ 0.51
HOXA9-201ENST00000343483 RNASEH1O60930 286 aaKnown RBP18.22■□□□□ 0.51
HOXA9-201ENST00000343483 ANXA5P08758 320 aa18.22■□□□□ 0.51
HOXA9-201ENST00000343483 PRR35P0CG20 571 aa18.22■□□□□ 0.51
HOXA9-201ENST00000343483 HTR6P50406 440 aa18.22■□□□□ 0.51
HOXA9-201ENST00000343483 MED21Q13503 144 aa18.22■□□□□ 0.51
HOXA9-201ENST00000343483 TRIM25Q14258 630 aaKnown RBP18.22■□□□□ 0.51
HOXA9-201ENST00000343483 ZNF234Q14588 700 aa18.22■□□□□ 0.51
HOXA9-201ENST00000343483 FBXL19Q6PCT2 694 aa18.22■□□□□ 0.51
HOXA9-201ENST00000343483 VITQ6UXI7 678 aa18.22■□□□□ 0.51
HOXA9-201ENST00000343483 PIP4K2CQ8TBX8 421 aa18.22■□□□□ 0.51
HOXA9-201ENST00000343483 CCT7Q99832 543 aa18.22■□□□□ 0.51
HOXA9-201ENST00000343483 C1orf50Q9BV19 199 aa18.22■□□□□ 0.51
HOXA9-201ENST00000343483 ZDHHC4Q9NPG8 344 aa18.22■□□□□ 0.51
HOXA9-201ENST00000343483 RIMS3Q9UJD0 308 aa18.22■□□□□ 0.51
HOXA9-201ENST00000343483 PDE10AQ9Y233 779 aa18.22■□□□□ 0.51
HOXA9-201ENST00000343483 C2orf16Q68DN1 1984 aa18.22■□□□□ 0.51
HOXA9-201ENST00000343483 K7EPI3 171 aa18.21■□□□□ 0.51
HOXA9-201ENST00000343483 EIF3FO00303 357 aaPredicted RBP18.21■□□□□ 0.51
HOXA9-201ENST00000343483 WNT9AO14904 365 aa18.21■□□□□ 0.51
HOXA9-201ENST00000343483 NUAK1O60285 661 aa18.21■□□□□ 0.51
HOXA9-201ENST00000343483 ZCCHC18P0CG32 403 aa18.21■□□□□ 0.51
HOXA9-201ENST00000343483 HMOX2P30519 316 aa18.21■□□□□ 0.51
HOXA9-201ENST00000343483 GRM2Q14416 872 aa18.21■□□□□ 0.51
HOXA9-201ENST00000343483 ELAVL3Q14576 367 aaKnown RBP18.21■□□□□ 0.51
HOXA9-201ENST00000343483 ATP6AP1LQ52LC2 224 aa18.21■□□□□ 0.51
HOXA9-201ENST00000343483 HACD2Q6Y1H2 254 aa18.21■□□□□ 0.51
HOXA9-201ENST00000343483 TERB1Q8NA31 727 aa18.21■□□□□ 0.51
HOXA9-201ENST00000343483 UBTD2Q8WUN7 234 aa18.21■□□□□ 0.51
HOXA9-201ENST00000343483 BTN2A2Q8WVV5 523 aa18.21■□□□□ 0.51
HOXA9-201ENST00000343483 SLC45A3Q96JT2 553 aa18.21■□□□□ 0.51
HOXA9-201ENST00000343483 CDCA3Q99618 268 aaPredicted RBP18.21■□□□□ 0.51
HOXA9-201ENST00000343483 TRPV4Q9HBA0 871 aa18.21■□□□□ 0.51
HOXA9-201ENST00000343483 OBP2AQ9NY56 170 aa18.21■□□□□ 0.51
HOXA9-201ENST00000343483 NFKBIL1Q9UBC1 381 aaPredicted RBP18.21■□□□□ 0.51
HOXA9-201ENST00000343483 PABPN1LA6NDY0 278 aaKnown RBP18.21■□□□□ 0.51
HOXA9-201ENST00000343483 PLK4O00444 970 aa18.21■□□□□ 0.51
HOXA9-201ENST00000343483 INPP4BO15327 924 aa18.21■□□□□ 0.51
HOXA9-201ENST00000343483 LINC01565O15544 149 aa18.21■□□□□ 0.51
HOXA9-201ENST00000343483 STK16O75716 305 aa18.21■□□□□ 0.51
HOXA9-201ENST00000343483 AP2A2O94973 939 aa18.21■□□□□ 0.51
HOXA9-201ENST00000343483 C8GP07360 202 aa18.21■□□□□ 0.51
HOXA9-201ENST00000343483 ITGB7P26010 798 aa18.21■□□□□ 0.51
HOXA9-201ENST00000343483 GBX1Q14549 363 aa18.21■□□□□ 0.51
HOXA9-201ENST00000343483 VPS26BQ4G0F5 336 aa18.21■□□□□ 0.51
HOXA9-201ENST00000343483 PLEKHS1Q5SXH7 462 aa18.21■□□□□ 0.51
HOXA9-201ENST00000343483 GPR153Q6NV75 609 aa18.21■□□□□ 0.51
HOXA9-201ENST00000343483 TMEM126BQ8IUX1 230 aa18.21■□□□□ 0.51
HOXA9-201ENST00000343483 FNDC5Q8NAU1 212 aa18.21■□□□□ 0.51
HOXA9-201ENST00000343483 GLYATL1Q969I3 302 aa18.21■□□□□ 0.51
HOXA9-201ENST00000343483 ARRDC3Q96B67 414 aa18.21■□□□□ 0.51
HOXA9-201ENST00000343483 TRIM54Q9BYV2 358 aa18.21■□□□□ 0.51
HOXA9-201ENST00000343483 PCDHAC1Q9H158 963 aa18.21■□□□□ 0.51
HOXA9-201ENST00000343483 PARVBQ9HBI1 364 aa18.21■□□□□ 0.51
HOXA9-201ENST00000343483 PDP2Q9P2J9 529 aa18.21■□□□□ 0.51
HOXA9-201ENST00000343483 COQ6Q9Y2Z9 468 aa18.21■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms