RNA–Protein interactions for RNA: ENST00000342245.8

SMPD1-201, Transcript of sphingomyelin phosphodiesterase 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SMPD1, Length 2,452 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD1-201ENST00000342245 SLC1A2P43004 574 aa18.22■□□□□ 0.51
SMPD1-201ENST00000342245 ZFP36L2P47974 494 aaKnown RBP18.22■□□□□ 0.51
SMPD1-201ENST00000342245 OLR1P78380 273 aa18.22■□□□□ 0.51
SMPD1-201ENST00000342245 SCN1BQ07699 218 aa18.22■□□□□ 0.51
SMPD1-201ENST00000342245 CAPSQ13938 189 aa18.22■□□□□ 0.51
SMPD1-201ENST00000342245 RNF135Q8IUD6 432 aa18.22■□□□□ 0.51
SMPD1-201ENST00000342245 ANKRD53Q8N9V6 530 aa18.22■□□□□ 0.51
SMPD1-201ENST00000342245 OR4M1Q8NGD0 313 aa18.22■□□□□ 0.51
SMPD1-201ENST00000342245 FRMD6Q96NE9 622 aa18.22■□□□□ 0.51
SMPD1-201ENST00000342245 TRNT1Q96Q11 434 aaKnown RBP18.22■□□□□ 0.51
SMPD1-201ENST00000342245 PLD2O14939 933 aa18.22■□□□□ 0.51
SMPD1-201ENST00000342245 CA12O43570 354 aa18.22■□□□□ 0.51
SMPD1-201ENST00000342245 CDK14O94921 469 aa18.22■□□□□ 0.51
SMPD1-201ENST00000342245 ASAH1Q13510 395 aa18.22■□□□□ 0.51
SMPD1-201ENST00000342245 ANGPT1Q15389 498 aa18.22■□□□□ 0.51
SMPD1-201ENST00000342245 SYT16Q17RD7 645 aa18.22■□□□□ 0.51
SMPD1-201ENST00000342245 PKDCCQ504Y2 493 aa18.22■□□□□ 0.51
SMPD1-201ENST00000342245 INTS6LQ5JSJ4 861 aaKnown RBP18.22■□□□□ 0.51
SMPD1-201ENST00000342245 STRIP1Q5VSL9 837 aa18.22■□□□□ 0.51
SMPD1-201ENST00000342245 MYDGFQ969H8 173 aa18.22■□□□□ 0.51
SMPD1-201ENST00000342245 MAGEB10Q96LZ2 347 aaPredicted RBP18.22■□□□□ 0.51
SMPD1-201ENST00000342245 TTLL2Q9BWV7 592 aa18.22■□□□□ 0.51
SMPD1-201ENST00000342245 PIF1Q9H611 641 aa18.22■□□□□ 0.51
SMPD1-201ENST00000342245 ERVK13-1Q9NX77 482 aa18.22■□□□□ 0.51
SMPD1-201ENST00000342245 LIMD1Q9UGP4 676 aa18.22■□□□□ 0.51
SMPD1-201ENST00000342245 KLK4Q9Y5K2 254 aa18.22■□□□□ 0.51
SMPD1-201ENST00000342245 COL11A2P13942 1736 aaPredicted RBP18.21■□□□□ 0.51
SMPD1-201ENST00000342245 ARNTLO00327 626 aa18.21■□□□□ 0.51
SMPD1-201ENST00000342245 PDE9AO76083 593 aa18.21■□□□□ 0.51
SMPD1-201ENST00000342245 MYL9P24844 172 aa18.21■□□□□ 0.51
SMPD1-201ENST00000342245 ARHGDIAP52565 204 aa18.21■□□□□ 0.51
SMPD1-201ENST00000342245 CD83Q01151 205 aa18.21■□□□□ 0.51
SMPD1-201ENST00000342245 DSC3Q14574 896 aa18.21■□□□□ 0.51
SMPD1-201ENST00000342245 TIMM50Q3ZCQ8 353 aa18.21■□□□□ 0.51
SMPD1-201ENST00000342245 MAP1SQ66K74 1059 aaPredicted RBP18.21■□□□□ 0.51
SMPD1-201ENST00000342245 ARHGAP36Q6ZRI8 547 aa18.21■□□□□ 0.51
SMPD1-201ENST00000342245 PYROXD2Q8N2H3 581 aa18.21■□□□□ 0.51
SMPD1-201ENST00000342245 MAGEB5Q9BZ81 275 aa18.21■□□□□ 0.51
SMPD1-201ENST00000342245 FAM83DQ9H4H8 585 aa18.21■□□□□ 0.51
SMPD1-201ENST00000342245 ADGRE2Q9UHX3 823 aa18.21■□□□□ 0.51
SMPD1-201ENST00000342245 GOLGB1Q14789 3259 aaKnown RBP18.21■□□□□ 0.51
SMPD1-201ENST00000342245 COL1A2P08123 1366 aa18.21■□□□□ 0.51
SMPD1-201ENST00000342245 CD3EAPO15446 510 aaKnown RBP18.21■□□□□ 0.5
SMPD1-201ENST00000342245 KCNJ13O60928 360 aa18.21■□□□□ 0.5
SMPD1-201ENST00000342245 SEC22BO75396 215 aa18.21■□□□□ 0.5
SMPD1-201ENST00000342245 ATXN1P54253 815 aaKnown RBP18.21■□□□□ 0.5
SMPD1-201ENST00000342245 KHDRBS1Q07666 443 aaKnown RBP eCLIP18.21■□□□□ 0.5
SMPD1-201ENST00000342245 GBX1Q14549 363 aa18.21■□□□□ 0.5
SMPD1-201ENST00000342245 MFSD13AQ14CX5 517 aa18.21■□□□□ 0.5
SMPD1-201ENST00000342245 STK11Q15831 433 aa18.21■□□□□ 0.5
SMPD1-201ENST00000342245 SUPT20HL1Q3ZLR7 823 aa18.21■□□□□ 0.5
SMPD1-201ENST00000342245 TIGD7Q6NT04 549 aaPredicted RBP18.21■□□□□ 0.5
SMPD1-201ENST00000342245 ZNF782Q6ZMW2 699 aaPredicted RBP18.21■□□□□ 0.5
SMPD1-201ENST00000342245 ABI1Q8IZP0 508 aa18.21■□□□□ 0.5
SMPD1-201ENST00000342245 FBXO30Q8TB52 745 aa18.21■□□□□ 0.5
SMPD1-201ENST00000342245 SLC35F5Q8WV83 523 aa18.21■□□□□ 0.5
SMPD1-201ENST00000342245 ZNF578Q96N58 590 aaPredicted RBP18.21■□□□□ 0.5
SMPD1-201ENST00000342245 UCKL1Q9NWZ5 548 aa18.21■□□□□ 0.5
SMPD1-201ENST00000342245 PRR23AA6NEV1 266 aa18.2■□□□□ 0.5
SMPD1-201ENST00000342245 INO80B-WBP1J3KQ70 363 aa18.2■□□□□ 0.5
SMPD1-201ENST00000342245 M0R082 166 aa18.2■□□□□ 0.5
SMPD1-201ENST00000342245 NR3C2P08235 984 aa18.2■□□□□ 0.5
SMPD1-201ENST00000342245 ICAM2P13598 275 aa18.2■□□□□ 0.5
SMPD1-201ENST00000342245 CAP2P40123 477 aa18.2■□□□□ 0.5
SMPD1-201ENST00000342245 LIMK1P53667 647 aa18.2■□□□□ 0.5
SMPD1-201ENST00000342245 PRKG2Q13237 762 aa18.2■□□□□ 0.5
SMPD1-201ENST00000342245 BTBD16Q32M84 506 aa18.2■□□□□ 0.5
SMPD1-201ENST00000342245 METTL2BQ6P1Q9 378 aaKnown RBP18.2■□□□□ 0.5
SMPD1-201ENST00000342245 ENPP6Q6UWR7 440 aa18.2■□□□□ 0.5
SMPD1-201ENST00000342245 MPZL3Q6UWV2 235 aa18.2■□□□□ 0.5
SMPD1-201ENST00000342245 C1orf127Q8N9H9 656 aa18.2■□□□□ 0.5
SMPD1-201ENST00000342245 DTX3Q8N9I9 347 aa18.2■□□□□ 0.5
SMPD1-201ENST00000342245 NUSAP1Q9BXS6 441 aaKnown RBP18.2■□□□□ 0.5
SMPD1-201ENST00000342245 NIFKQ9BYG3 293 aaKnown RBP18.2■□□□□ 0.5
SMPD1-201ENST00000342245 TMEM245Q9H330 911 aa18.2■□□□□ 0.5
SMPD1-201ENST00000342245 RIBC2Q9H4K1 309 aa18.2■□□□□ 0.5
SMPD1-201ENST00000342245 ING3Q9NXR8 418 aa18.2■□□□□ 0.5
SMPD1-201ENST00000342245 GIMAP2Q9UG22 337 aa18.2■□□□□ 0.5
SMPD1-201ENST00000342245 PKP3Q9Y446 797 aa18.2■□□□□ 0.5
SMPD1-201ENST00000342245 ANKRD28O15084 1053 aa18.2■□□□□ 0.5
SMPD1-201ENST00000342245 DIO3P55073 304 aa18.2■□□□□ 0.5
SMPD1-201ENST00000342245 RAB25P57735 213 aa18.2■□□□□ 0.5
SMPD1-201ENST00000342245 KIAA0930Q6ICG6 404 aaPredicted RBP18.2■□□□□ 0.5
SMPD1-201ENST00000342245 VSIG10LQ86VR7 867 aa18.2■□□□□ 0.5
SMPD1-201ENST00000342245 ZFAND4Q86XD8 727 aa18.2■□□□□ 0.5
SMPD1-201ENST00000342245 KIF18BQ86Y91 864 aa18.2■□□□□ 0.5
SMPD1-201ENST00000342245 KLHDC8BQ8IXV7 354 aa18.2■□□□□ 0.5
SMPD1-201ENST00000342245 GLB1L3Q8NCI6 653 aaPredicted RBP18.2■□□□□ 0.5
SMPD1-201ENST00000342245 OR2T12Q8NG77 320 aa18.2■□□□□ 0.5
SMPD1-201ENST00000342245 APOL2Q9BQE5 337 aa18.2■□□□□ 0.5
SMPD1-201ENST00000342245 RPF1Q9H9Y2 349 aaKnown RBP18.2■□□□□ 0.5
SMPD1-201ENST00000342245 NIPSNAP3AQ9UFN0 247 aaPredicted RBP18.2■□□□□ 0.5
SMPD1-201ENST00000342245 NDRG4Q9ULP0 352 aaKnown RBP18.2■□□□□ 0.5
SMPD1-201ENST00000342245 AAR2Q9Y312 384 aaKnown RBP18.2■□□□□ 0.5
SMPD1-201ENST00000342245 SCN9AQ15858 1988 aa18.19■□□□□ 0.5
SMPD1-201ENST00000342245 DCLK1O15075 740 aa18.19■□□□□ 0.5
SMPD1-201ENST00000342245 RETP07949 1114 aa18.19■□□□□ 0.5
SMPD1-201ENST00000342245 NFKB1P19838 968 aa18.19■□□□□ 0.5
SMPD1-201ENST00000342245 CPN2P22792 545 aa18.19■□□□□ 0.5
SMPD1-201ENST00000342245 BCAT1P54687 386 aa18.19■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms