RNA–Protein interactions for RNA: ENST00000341307.6

RTN3-203, Transcript of reticulon 3, humanhuman

TSL 2 BASIC

Gene RTN3, Length 2,524 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-203ENST00000341307 BBS2Q9BXC9 721 aa11.66□□□□□ -0.54
RTN3-203ENST00000341307 TMEM30AQ9NV96 361 aa11.66□□□□□ -0.54
RTN3-203ENST00000341307 USP22Q9UPT9 525 aa11.66□□□□□ -0.54
RTN3-203ENST00000341307 RAP2CQ9Y3L5 183 aa11.66□□□□□ -0.54
RTN3-203ENST00000341307 SNX8Q9Y5X2 465 aa11.66□□□□□ -0.54
RTN3-203ENST00000341307 TTC24A2A3L6 582 aaPredicted RBP11.66□□□□□ -0.54
RTN3-203ENST00000341307 OR6C70A6NIJ9 312 aa11.66□□□□□ -0.54
RTN3-203ENST00000341307 YKT6O15498 198 aa11.66□□□□□ -0.54
RTN3-203ENST00000341307 NRP2O60462 931 aa11.66□□□□□ -0.54
RTN3-203ENST00000341307 PTP4A3O75365 173 aa11.66□□□□□ -0.54
RTN3-203ENST00000341307 PEX14O75381 377 aa11.66□□□□□ -0.54
RTN3-203ENST00000341307 CD9P21926 228 aa11.66□□□□□ -0.54
RTN3-203ENST00000341307 WARSP23381 471 aaKnown RBP11.66□□□□□ -0.54
RTN3-203ENST00000341307 GP5P40197 560 aa11.66□□□□□ -0.54
RTN3-203ENST00000341307 CD83Q01151 205 aa11.66□□□□□ -0.54
RTN3-203ENST00000341307 PRKCDQ05655 676 aa11.66□□□□□ -0.54
RTN3-203ENST00000341307 PYCR3Q53H96 274 aa11.66□□□□□ -0.54
RTN3-203ENST00000341307 TPRG1LQ5T0D9 272 aa11.66□□□□□ -0.54
RTN3-203ENST00000341307 TMEM81Q6P7N7 255 aa11.66□□□□□ -0.54
RTN3-203ENST00000341307 DARS2Q6PI48 645 aaKnown RBP11.66□□□□□ -0.54
RTN3-203ENST00000341307 CORO6Q6QEF8 472 aa11.66□□□□□ -0.54
RTN3-203ENST00000341307 CLEC20AQ6ZU45 233 aa11.66□□□□□ -0.54
RTN3-203ENST00000341307 HFE2Q6ZVN8 426 aa11.66□□□□□ -0.54
RTN3-203ENST00000341307 CREB3L2Q70SY1 520 aa11.66□□□□□ -0.54
RTN3-203ENST00000341307 SLC26A9Q7LBE3 791 aa11.66□□□□□ -0.54
RTN3-203ENST00000341307 FAM131BQ86XD5 332 aa11.66□□□□□ -0.54
RTN3-203ENST00000341307 RAB43Q86YS6 212 aa11.66□□□□□ -0.54
RTN3-203ENST00000341307 PLD3Q8IV08 490 aa11.66□□□□□ -0.54
RTN3-203ENST00000341307 PJA1Q8NG27 643 aa11.66□□□□□ -0.54
RTN3-203ENST00000341307 SIGLEC10Q96LC7 697 aa11.66□□□□□ -0.54
RTN3-203ENST00000341307 FTHL17Q9BXU8 183 aa11.66□□□□□ -0.54
RTN3-203ENST00000341307 FRMD8P1Q9BZ68 369 aaPredicted RBP11.66□□□□□ -0.54
RTN3-203ENST00000341307 C6orf62Q9GZU0 229 aaPredicted RBP11.66□□□□□ -0.54
RTN3-203ENST00000341307 SLC6A17Q9H1V8 727 aa11.66□□□□□ -0.54
RTN3-203ENST00000341307 DHX35Q9H5Z1 703 aaKnown RBP11.66□□□□□ -0.54
RTN3-203ENST00000341307 RAB6BQ9NRW1 208 aa11.66□□□□□ -0.54
RTN3-203ENST00000341307 INTS10Q9NVR2 710 aaKnown RBP11.66□□□□□ -0.54
RTN3-203ENST00000341307 EGFL7Q9UHF1 273 aa11.66□□□□□ -0.54
RTN3-203ENST00000341307 RNF112Q9ULX5 631 aa11.66□□□□□ -0.54
RTN3-203ENST00000341307 KLF2Q9Y5W3 355 aaPredicted RBP11.66□□□□□ -0.54
RTN3-203ENST00000341307 CACNG2Q9Y698 323 aa11.66□□□□□ -0.54
RTN3-203ENST00000341307 PTGES3LE9PB15 166 aa11.65□□□□□ -0.54
RTN3-203ENST00000341307 ADAM11O75078 769 aa11.65□□□□□ -0.54
RTN3-203ENST00000341307 SRP72O76094 671 aaKnown RBP11.65□□□□□ -0.54
RTN3-203ENST00000341307 RETP07949 1114 aa11.65□□□□□ -0.54
RTN3-203ENST00000341307 CD6P30203 668 aa11.65□□□□□ -0.54
RTN3-203ENST00000341307 HMGCLP35914 325 aa11.65□□□□□ -0.54
RTN3-203ENST00000341307 BRCC3P46736 316 aa11.65□□□□□ -0.54
RTN3-203ENST00000341307 ATP5OP48047 213 aa11.65□□□□□ -0.54
RTN3-203ENST00000341307 RFX2P48378 723 aa11.65□□□□□ -0.54
RTN3-203ENST00000341307 STX5Q13190 355 aa11.65□□□□□ -0.54
RTN3-203ENST00000341307 PDK2Q15119 407 aa11.65□□□□□ -0.54
RTN3-203ENST00000341307 BTBD16Q32M84 506 aa11.65□□□□□ -0.54
RTN3-203ENST00000341307 TIGD5Q53EQ6 642 aa11.65□□□□□ -0.54
RTN3-203ENST00000341307 LAMTOR1Q6IAA8 161 aa11.65□□□□□ -0.54
RTN3-203ENST00000341307 CES5AQ6NT32 575 aa11.65□□□□□ -0.54
RTN3-203ENST00000341307 TBC1D21Q8IYX1 336 aa11.65□□□□□ -0.54
RTN3-203ENST00000341307 C8orf59Q8N0T1 100 aaPredicted RBP11.65□□□□□ -0.54
RTN3-203ENST00000341307 DEFB106AQ8N104 65 aa11.65□□□□□ -0.54
RTN3-203ENST00000341307 KLHDC9Q8NEP7 349 aa11.65□□□□□ -0.54
RTN3-203ENST00000341307 RPL10LQ96L21 214 aaKnown RBP11.65□□□□□ -0.54
RTN3-203ENST00000341307 C11orf84Q9BUA3 381 aaPredicted RBP11.65□□□□□ -0.54
RTN3-203ENST00000341307 DUSP16Q9BY84 665 aa11.65□□□□□ -0.54
RTN3-203ENST00000341307 CCDC90BQ9GZT6 254 aa11.65□□□□□ -0.54
RTN3-203ENST00000341307 TMLHEQ9NVH6 421 aa11.65□□□□□ -0.54
RTN3-203ENST00000341307 C14orf119Q9NWQ9 140 aa11.65□□□□□ -0.54
RTN3-203ENST00000341307 MTMR10Q9NXD2 777 aa11.65□□□□□ -0.54
RTN3-203ENST00000341307 SLC23A1Q9UHI7 598 aa11.65□□□□□ -0.54
RTN3-203ENST00000341307 OGDHLQ9ULD0 1010 aa11.65□□□□□ -0.54
RTN3-203ENST00000341307 NOD1Q9Y239 953 aa11.65□□□□□ -0.54
RTN3-203ENST00000341307 MFHAS1Q9Y4C4 1052 aa11.65□□□□□ -0.54
RTN3-203ENST00000341307 H0YC42 278 aa11.65□□□□□ -0.54
RTN3-203ENST00000341307 NME4O00746 187 aa11.65□□□□□ -0.54
RTN3-203ENST00000341307 GABRDO14764 452 aa11.65□□□□□ -0.54
RTN3-203ENST00000341307 GPR182O15218 404 aa11.65□□□□□ -0.54
RTN3-203ENST00000341307 ARHGEF9O43307 516 aa11.65□□□□□ -0.54
RTN3-203ENST00000341307 TRIM13O60858 407 aa11.65□□□□□ -0.54
RTN3-203ENST00000341307 PIGNO95427 931 aa11.65□□□□□ -0.54
RTN3-203ENST00000341307 ARSAP15289 507 aa11.65□□□□□ -0.54
RTN3-203ENST00000341307 NPR3P17342 541 aa11.65□□□□□ -0.54
RTN3-203ENST00000341307 MSH3P20585 1137 aa11.65□□□□□ -0.54
RTN3-203ENST00000341307 ITGALP20701 1170 aa11.65□□□□□ -0.54
RTN3-203ENST00000341307 MAP2K4P45985 399 aa11.65□□□□□ -0.54
RTN3-203ENST00000341307 TPD52P55327 224 aaPredicted RBP11.65□□□□□ -0.54
RTN3-203ENST00000341307 BNC1Q01954 994 aa11.65□□□□□ -0.54
RTN3-203ENST00000341307 GRM7Q14831 915 aa11.65□□□□□ -0.54
RTN3-203ENST00000341307 NOMO1Q15155 1222 aa11.65□□□□□ -0.54
RTN3-203ENST00000341307 OTUD3Q5T2D3 398 aaPredicted RBP11.65□□□□□ -0.54
RTN3-203ENST00000341307 SYPL2Q5VXT5 272 aa11.65□□□□□ -0.54
RTN3-203ENST00000341307 FAM45BPQ6NSW5 357 aa11.65□□□□□ -0.54
RTN3-203ENST00000341307 GPRIN1Q7Z2K8 1008 aa11.65□□□□□ -0.54
RTN3-203ENST00000341307 EFL1Q7Z2Z2 1120 aaKnown RBP11.65□□□□□ -0.54
RTN3-203ENST00000341307 ZDHHC17Q8IUH5 632 aa11.65□□□□□ -0.54
RTN3-203ENST00000341307 PHC2Q8IXK0 858 aa11.65□□□□□ -0.54
RTN3-203ENST00000341307 PELI3Q8N2H9 469 aa11.65□□□□□ -0.54
RTN3-203ENST00000341307 PIAS4Q8N2W9 510 aaPredicted RBP11.65□□□□□ -0.54
RTN3-203ENST00000341307 MCUQ8NE86 351 aa11.65□□□□□ -0.54
RTN3-203ENST00000341307 FAM45AQ8TCE6 357 aa11.65□□□□□ -0.54
RTN3-203ENST00000341307 STON2Q8WXE9 905 aa11.65□□□□□ -0.54
RTN3-203ENST00000341307 PCED1BQ96HM7 432 aa11.65□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms