RNA–Protein interactions for RNA: ENST00000340660.10

ATXN3-201, Transcript of ataxin 3, humanhuman

TSL 1 (best) BASIC

Gene ATXN3, Length 1,205 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-201ENST00000340660 GPN3Q9UHW5 284 aaPredicted RBP10.72□□□□□ -0.69
ATXN3-201ENST00000340660 MTMR6Q9Y217 621 aa10.72□□□□□ -0.69
ATXN3-201ENST00000340660 SIK3Q9Y2K2 1263 aa10.72□□□□□ -0.69
ATXN3-201ENST00000340660 HS3ST3B1Q9Y662 390 aa10.72□□□□□ -0.69
ATXN3-201ENST00000340660 M0QYV0 167 aa10.71□□□□□ -0.69
ATXN3-201ENST00000340660 VDRP11473 427 aa10.71□□□□□ -0.69
ATXN3-201ENST00000340660 THBS2P35442 1172 aa10.71□□□□□ -0.69
ATXN3-201ENST00000340660 ETV3P41162 512 aa10.71□□□□□ -0.69
ATXN3-201ENST00000340660 RPL34P49207 117 aaKnown RBP10.71□□□□□ -0.69
ATXN3-201ENST00000340660 NUP107P57740 925 aa10.71□□□□□ -0.69
ATXN3-201ENST00000340660 YWHAZP63104 245 aaKnown RBP10.71□□□□□ -0.69
ATXN3-201ENST00000340660 ATG9BQ674R7 924 aa10.71□□□□□ -0.69
ATXN3-201ENST00000340660 FBXO38Q6PIJ6 1188 aa10.71□□□□□ -0.69
ATXN3-201ENST00000340660 CAMK1DQ8IU85 385 aa10.71□□□□□ -0.69
ATXN3-201ENST00000340660 TRIM48Q8IWZ4 208 aa10.71□□□□□ -0.69
ATXN3-201ENST00000340660 STK35Q8TDR2 534 aa10.71□□□□□ -0.69
ATXN3-201ENST00000340660 SEMA4DQ92854 862 aa10.71□□□□□ -0.69
ATXN3-201ENST00000340660 DTD2Q96FN9 168 aa10.71□□□□□ -0.69
ATXN3-201ENST00000340660 EPSTI1Q96J88 318 aa10.71□□□□□ -0.69
ATXN3-201ENST00000340660 PPM1MQ96MI6 270 aa10.71□□□□□ -0.69
ATXN3-201ENST00000340660 C17orf62Q9BQA9 187 aa10.71□□□□□ -0.69
ATXN3-201ENST00000340660 MESP1Q9BRJ9 268 aa10.71□□□□□ -0.69
ATXN3-201ENST00000340660 TRIM62Q9BVG3 475 aa10.71□□□□□ -0.69
ATXN3-201ENST00000340660 CDC23Q9UJX2 597 aa10.71□□□□□ -0.69
ATXN3-201ENST00000340660 MRPS2Q9Y399 296 aaKnown RBP10.71□□□□□ -0.69
ATXN3-201ENST00000340660 ANKRD12Q6UB98 2062 aa10.7□□□□□ -0.7
ATXN3-201ENST00000340660 UBA6A0AVT1 1052 aaPredicted RBP10.7□□□□□ -0.7
ATXN3-201ENST00000340660 TMEM150CB9EJG8 249 aa10.7□□□□□ -0.7
ATXN3-201ENST00000340660 ZNF749O43361 778 aa10.7□□□□□ -0.7
ATXN3-201ENST00000340660 MLYCDO95822 493 aa10.7□□□□□ -0.7
ATXN3-201ENST00000340660 GCLMP48507 274 aa10.7□□□□□ -0.7
ATXN3-201ENST00000340660 RHOAP61586 193 aa10.7□□□□□ -0.7
ATXN3-201ENST00000340660 CDK17Q00537 523 aa10.7□□□□□ -0.7
ATXN3-201ENST00000340660 PPP3CAQ08209 521 aa10.7□□□□□ -0.7
ATXN3-201ENST00000340660 ADCY2Q08462 1091 aa10.7□□□□□ -0.7
ATXN3-201ENST00000340660 PMPCAQ10713 525 aa10.7□□□□□ -0.7
ATXN3-201ENST00000340660 PAK1Q13153 545 aa10.7□□□□□ -0.7
ATXN3-201ENST00000340660 NME3Q13232 169 aa10.7□□□□□ -0.7
ATXN3-201ENST00000340660 CDK5R2Q13319 367 aa10.7□□□□□ -0.7
ATXN3-201ENST00000340660 MTA1Q13330 715 aa10.7□□□□□ -0.7
ATXN3-201ENST00000340660 CNGA3Q16281 694 aa10.7□□□□□ -0.7
ATXN3-201ENST00000340660 TUBB8Q3ZCM7 444 aa10.7□□□□□ -0.7
ATXN3-201ENST00000340660 DNTTIP2Q5QJE6 756 aaKnown RBP10.7□□□□□ -0.7
ATXN3-201ENST00000340660 TMTC4Q5T4D3 741 aa10.7□□□□□ -0.7
ATXN3-201ENST00000340660 CFAP58Q5T655 872 aa10.7□□□□□ -0.7
ATXN3-201ENST00000340660 C1orf189Q5VU69 101 aa10.7□□□□□ -0.7
ATXN3-201ENST00000340660 KAZNQ674X7 775 aa10.7□□□□□ -0.7
ATXN3-201ENST00000340660 KIAA0930Q6ICG6 404 aaPredicted RBP10.7□□□□□ -0.7
ATXN3-201ENST00000340660 WFDC3Q8IUB2 231 aa10.7□□□□□ -0.7
ATXN3-201ENST00000340660 LIX1LQ8IVB5 337 aa10.7□□□□□ -0.7
ATXN3-201ENST00000340660 CCDC65Q8IXS2 484 aa10.7□□□□□ -0.7
ATXN3-201ENST00000340660 FAM57AQ8TBR7 257 aa10.7□□□□□ -0.7
ATXN3-201ENST00000340660 BRIX1Q8TDN6 353 aaKnown RBP10.7□□□□□ -0.7
ATXN3-201ENST00000340660 KRTAP9-9Q9BYP9 154 aa10.7□□□□□ -0.7
ATXN3-201ENST00000340660 KRTAP9-4Q9BYQ2 154 aa10.7□□□□□ -0.7
ATXN3-201ENST00000340660 CUEDC2Q9H467 287 aa10.7□□□□□ -0.7
ATXN3-201ENST00000340660 SLC40A1Q9NP59 571 aa10.7□□□□□ -0.7
ATXN3-201ENST00000340660 LHX3Q9UBR4 397 aa10.7□□□□□ -0.7
ATXN3-201ENST00000340660 NDOR1Q9UHB4 597 aa10.7□□□□□ -0.7
ATXN3-201ENST00000340660 DOCK4Q8N1I0 1966 aa10.69□□□□□ -0.7
ATXN3-201ENST00000340660 ZBTB11O95625 1053 aaPredicted RBP10.69□□□□□ -0.7
ATXN3-201ENST00000340660 TNFAIP3P21580 790 aa10.69□□□□□ -0.7
ATXN3-201ENST00000340660 LONP1P36776 959 aaKnown RBP10.69□□□□□ -0.7
ATXN3-201ENST00000340660 ETFBP38117 255 aa10.69□□□□□ -0.7
ATXN3-201ENST00000340660 DENND2CQ68D51 928 aa10.69□□□□□ -0.7
ATXN3-201ENST00000340660 HSD11B1LQ7Z5J1 315 aa10.69□□□□□ -0.7
ATXN3-201ENST00000340660 PAQR7Q86WK9 346 aa10.69□□□□□ -0.7
ATXN3-201ENST00000340660 DEFB106AQ8N104 65 aa10.69□□□□□ -0.7
ATXN3-201ENST00000340660 SIRT6Q8N6T7 355 aa10.69□□□□□ -0.7
ATXN3-201ENST00000340660 OR11G2Q8NGC1 345 aa10.69□□□□□ -0.7
ATXN3-201ENST00000340660 SUN3Q8TAQ9 357 aa10.69□□□□□ -0.7
ATXN3-201ENST00000340660 ZNF641Q96N77 438 aaPredicted RBP10.69□□□□□ -0.7
ATXN3-201ENST00000340660 SARGQ9BW04 601 aa10.69□□□□□ -0.7
ATXN3-201ENST00000340660 SLC7A5P2Q9GIP4 190 aa10.69□□□□□ -0.7
ATXN3-201ENST00000340660 FANCEQ9HB96 536 aa10.69□□□□□ -0.7
ATXN3-201ENST00000340660 SOHLH2Q9NX45 425 aa10.69□□□□□ -0.7
ATXN3-201ENST00000340660 IFT80Q9P2H3 777 aaPredicted RBP10.69□□□□□ -0.7
ATXN3-201ENST00000340660 B4GALT6Q9UBX8 382 aa10.69□□□□□ -0.7
ATXN3-201ENST00000340660 DNAJC16Q9Y2G8 782 aa10.69□□□□□ -0.7
ATXN3-201ENST00000340660 ASPDHA6ND91 283 aa10.68□□□□□ -0.7
ATXN3-201ENST00000340660 A8MV72 311 aaPredicted RBP10.68□□□□□ -0.7
ATXN3-201ENST00000340660 SRGAP2O75044 1071 aa10.68□□□□□ -0.7
ATXN3-201ENST00000340660 SOX30O94993 753 aa10.68□□□□□ -0.7
ATXN3-201ENST00000340660 CALCAP01258 141 aa10.68□□□□□ -0.7
ATXN3-201ENST00000340660 TP53P04637 393 aaPredicted RBP10.68□□□□□ -0.7
ATXN3-201ENST00000340660 GPR1P46091 355 aa10.68□□□□□ -0.7
ATXN3-201ENST00000340660 CEBPZQ03701 1054 aaKnown RBP10.68□□□□□ -0.7
ATXN3-201ENST00000340660 TNK1Q13470 666 aa10.68□□□□□ -0.7
ATXN3-201ENST00000340660 RILPL1Q5EBL4 403 aa10.68□□□□□ -0.7
ATXN3-201ENST00000340660 ZNF766Q5HY98 468 aa10.68□□□□□ -0.7
ATXN3-201ENST00000340660 HIBCHQ6NVY1 386 aaPredicted RBP10.68□□□□□ -0.7
ATXN3-201ENST00000340660 NXPE4Q6UWF7 544 aa10.68□□□□□ -0.7
ATXN3-201ENST00000340660 LRRC31Q6UY01 552 aa10.68□□□□□ -0.7
ATXN3-201ENST00000340660 RFLNAQ6ZTI6 216 aa10.68□□□□□ -0.7
ATXN3-201ENST00000340660 MCATQ8IVS2 390 aaKnown RBP10.68□□□□□ -0.7
ATXN3-201ENST00000340660 SULF2Q8IWU5 870 aa10.68□□□□□ -0.7
ATXN3-201ENST00000340660 SMYD4Q8IYR2 804 aaPredicted RBP10.68□□□□□ -0.7
ATXN3-201ENST00000340660 COX14Q96I36 57 aa10.68□□□□□ -0.7
ATXN3-201ENST00000340660 FAXDC2Q96IV6 333 aa10.68□□□□□ -0.7
ATXN3-201ENST00000340660 FRMD6Q96NE9 622 aa10.68□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms