RNA–Protein interactions for RNA: ENST00000340623.4

C2orf88-201, Transcript of chromosome 2 open reading frame 88, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene C2orf88, Length 4,035 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C2orf88-201ENST00000340623 SEC22BO75396 215 aa11.52□□□□□ -0.57
C2orf88-201ENST00000340623 CXCL12P48061 93 aa11.52□□□□□ -0.57
C2orf88-201ENST00000340623 ARCN1P48444 511 aaKnown RBP11.52□□□□□ -0.57
C2orf88-201ENST00000340623 METAP1P53582 386 aa11.52□□□□□ -0.57
C2orf88-201ENST00000340623 RAD51AP1Q96B01 352 aa11.52□□□□□ -0.57
C2orf88-201ENST00000340623 ASB2Q96Q27 587 aa11.52□□□□□ -0.57
C2orf88-201ENST00000340623 TBC1D17Q9HA65 648 aa11.52□□□□□ -0.57
C2orf88-201ENST00000340623 NUDT4Q9NZJ9 180 aa11.52□□□□□ -0.57
C2orf88-201ENST00000340623 DKK3Q9UBP4 350 aa11.52□□□□□ -0.57
C2orf88-201ENST00000340623 OTCP00480 354 aa11.51□□□□□ -0.57
C2orf88-201ENST00000340623 CHRNGP07510 517 aa11.51□□□□□ -0.57
C2orf88-201ENST00000340623 DCNP07585 359 aaKnown RBP11.51□□□□□ -0.57
C2orf88-201ENST00000340623 CISD3P0C7P0 127 aa11.51□□□□□ -0.57
C2orf88-201ENST00000340623 BDKRB1P46663 353 aa11.51□□□□□ -0.57
C2orf88-201ENST00000340623 PTSQ03393 145 aa11.51□□□□□ -0.57
C2orf88-201ENST00000340623 C1orf61Q13536 156 aa11.51□□□□□ -0.57
C2orf88-201ENST00000340623 SEMA3AQ14563 771 aa11.51□□□□□ -0.57
C2orf88-201ENST00000340623 ATP6AP1LQ52LC2 224 aa11.51□□□□□ -0.57
C2orf88-201ENST00000340623 TMEM196Q5HYL7 178 aa11.51□□□□□ -0.57
C2orf88-201ENST00000340623 PRAMEF14Q5SWL7 426 aa11.51□□□□□ -0.57
C2orf88-201ENST00000340623 CAPN13Q6MZZ7 669 aaPredicted RBP11.51□□□□□ -0.57
C2orf88-201ENST00000340623 DNAJC14Q6Y2X3 702 aaPredicted RBP11.51□□□□□ -0.57
C2orf88-201ENST00000340623 Q6ZS52 159 aa11.51□□□□□ -0.57
C2orf88-201ENST00000340623 CBARPQ8N350 705 aaPredicted RBP11.51□□□□□ -0.57
C2orf88-201ENST00000340623 DDX51Q8N8A6 666 aaKnown RBP eCLIP11.51□□□□□ -0.57
C2orf88-201ENST00000340623 FAM13CQ8NE31 585 aa11.51□□□□□ -0.57
C2orf88-201ENST00000340623 TFGQ92734 400 aaPredicted RBP11.51□□□□□ -0.57
C2orf88-201ENST00000340623 MKRN2Q9H000 416 aaKnown RBP11.51□□□□□ -0.57
C2orf88-201ENST00000340623 TRIM39Q9HCM9 518 aa11.51□□□□□ -0.57
C2orf88-201ENST00000340623 TAGLN3Q9UI15 199 aa11.51□□□□□ -0.57
C2orf88-201ENST00000340623 RIMKLBQ9ULI2 386 aa11.51□□□□□ -0.57
C2orf88-201ENST00000340623 PCDHGB4Q9UN71 923 aa11.51□□□□□ -0.57
C2orf88-201ENST00000340623 EIF3LQ9Y262 564 aaKnown RBP11.51□□□□□ -0.57
C2orf88-201ENST00000340623 TRAF6Q9Y4K3 522 aa11.51□□□□□ -0.57
C2orf88-201ENST00000340623 ZNF839A8K0R7 811 aa11.51□□□□□ -0.57
C2orf88-201ENST00000340623 A8MT66 165 aa11.51□□□□□ -0.57
C2orf88-201ENST00000340623 HDAC3O15379 428 aa11.51□□□□□ -0.57
C2orf88-201ENST00000340623 ULK1O75385 1050 aa11.51□□□□□ -0.57
C2orf88-201ENST00000340623 SEC24DO94855 1032 aaPredicted RBP11.51□□□□□ -0.57
C2orf88-201ENST00000340623 C8GP07360 202 aa11.51□□□□□ -0.57
C2orf88-201ENST00000340623 GDF5P43026 501 aa11.51□□□□□ -0.57
C2orf88-201ENST00000340623 PLOD1Q02809 727 aaPredicted RBP11.51□□□□□ -0.57
C2orf88-201ENST00000340623 CLCQ05315 142 aa11.51□□□□□ -0.57
C2orf88-201ENST00000340623 MAPRE2Q15555 327 aa11.51□□□□□ -0.57
C2orf88-201ENST00000340623 SF1Q15637 639 aaKnown RBP11.51□□□□□ -0.57
C2orf88-201ENST00000340623 TMEM154Q6P9G4 183 aa11.51□□□□□ -0.57
C2orf88-201ENST00000340623 CEP70Q8NHQ1 597 aa11.51□□□□□ -0.57
C2orf88-201ENST00000340623 TRIB3Q96RU7 358 aa11.51□□□□□ -0.57
C2orf88-201ENST00000340623 TRIT1Q9H3H1 467 aaKnown RBP11.51□□□□□ -0.57
C2orf88-201ENST00000340623 DNAJC11Q9NVH1 559 aa11.51□□□□□ -0.57
C2orf88-201ENST00000340623 VTI1BQ9UEU0 232 aa11.51□□□□□ -0.57
C2orf88-201ENST00000340623 PPM1HQ9ULR3 514 aa11.51□□□□□ -0.57
C2orf88-201ENST00000340623 TMEM114B3SHH9 223 aa11.51□□□□□ -0.57
C2orf88-201ENST00000340623 GREM1O60565 184 aa11.51□□□□□ -0.57
C2orf88-201ENST00000340623 EIF2S1P05198 315 aaKnown RBP11.51□□□□□ -0.57
C2orf88-201ENST00000340623 LINC00032P0C843 101 aa11.51□□□□□ -0.57
C2orf88-201ENST00000340623 MMP12P39900 470 aa11.51□□□□□ -0.57
C2orf88-201ENST00000340623 AGKQ53H12 422 aa11.51□□□□□ -0.57
C2orf88-201ENST00000340623 CACHD1Q5VU97 1274 aa11.51□□□□□ -0.57
C2orf88-201ENST00000340623 ETFBKMTQ8IXQ9 262 aa11.51□□□□□ -0.57
C2orf88-201ENST00000340623 NRSN1Q8IZ57 195 aa11.51□□□□□ -0.57
C2orf88-201ENST00000340623 PHC3Q8NDX5 983 aa11.51□□□□□ -0.57
C2orf88-201ENST00000340623 SIRPGQ9P1W8 387 aa11.51□□□□□ -0.57
C2orf88-201ENST00000340623 KLHL3Q9UH77 587 aa11.51□□□□□ -0.57
C2orf88-201ENST00000340623 SCML1Q9UN30 329 aa11.51□□□□□ -0.57
C2orf88-201ENST00000340623 SIT1Q9Y3P8 196 aa11.51□□□□□ -0.57
C2orf88-201ENST00000340623 A0A1W2PPC1 479 aa11.51□□□□□ -0.57
C2orf88-201ENST00000340623 KANSL1LA0AUZ9 987 aa11.51□□□□□ -0.57
C2orf88-201ENST00000340623 KMOO15229 486 aa11.51□□□□□ -0.57
C2orf88-201ENST00000340623 TYROBPO43914 113 aa11.51□□□□□ -0.57
C2orf88-201ENST00000340623 CD160O95971 181 aa11.51□□□□□ -0.57
C2orf88-201ENST00000340623 LMNAP02545 664 aaKnown RBP11.51□□□□□ -0.57
C2orf88-201ENST00000340623 CTSLP07711 333 aa11.51□□□□□ -0.57
C2orf88-201ENST00000340623 MAOBP27338 520 aa11.51□□□□□ -0.57
C2orf88-201ENST00000340623 BLKP51451 505 aa11.51□□□□□ -0.57
C2orf88-201ENST00000340623 DNAL1Q4LDG9 190 aa11.51□□□□□ -0.57
C2orf88-201ENST00000340623 KIAA1161Q6NSJ0 714 aa11.51□□□□□ -0.57
C2orf88-201ENST00000340623 SNX32Q86XE0 403 aa11.51□□□□□ -0.57
C2orf88-201ENST00000340623 ZNF781Q8N8C0 355 aa11.51□□□□□ -0.57
C2orf88-201ENST00000340623 IL17RCQ8NAC3 791 aa11.51□□□□□ -0.57
C2orf88-201ENST00000340623 ANKRD49Q8WVL7 239 aa11.51□□□□□ -0.57
C2orf88-201ENST00000340623 LCN9Q8WX39 176 aa11.51□□□□□ -0.57
C2orf88-201ENST00000340623 TSACCQ96A04 125 aaPredicted RBP11.51□□□□□ -0.57
C2orf88-201ENST00000340623 COG4Q9H9E3 785 aa11.51□□□□□ -0.57
C2orf88-201ENST00000340623 PARVBQ9HBI1 364 aa11.51□□□□□ -0.57
C2orf88-201ENST00000340623 NMRK1Q9NWW6 199 aa11.51□□□□□ -0.57
C2orf88-201ENST00000340623 TMCO1Q9UM00 188 aa11.51□□□□□ -0.57
C2orf88-201ENST00000340623 SRRM3A6NNA2 597 aaPredicted RBP11.5□□□□□ -0.57
C2orf88-201ENST00000340623 B4DGG1 531 aa11.5□□□□□ -0.57
C2orf88-201ENST00000340623 C9JVG2 144 aa11.5□□□□□ -0.57
C2orf88-201ENST00000340623 GFRA2O00451 464 aa11.5□□□□□ -0.57
C2orf88-201ENST00000340623 FESP07332 822 aa11.5□□□□□ -0.57
C2orf88-201ENST00000340623 GABRB3P28472 473 aa11.5□□□□□ -0.57
C2orf88-201ENST00000340623 GCAP28676 217 aa11.5□□□□□ -0.57
C2orf88-201ENST00000340623 TEAD4Q15561 434 aa11.5□□□□□ -0.57
C2orf88-201ENST00000340623 KIAA1211LQ6NV74 962 aa11.5□□□□□ -0.57
C2orf88-201ENST00000340623 GJD3Q8N144 294 aa11.5□□□□□ -0.57
C2orf88-201ENST00000340623 CNDP1Q96KN2 507 aa11.5□□□□□ -0.57
C2orf88-201ENST00000340623 DCLRE1BQ9H816 532 aa11.5□□□□□ -0.57
C2orf88-201ENST00000340623 BCAP29Q9UHQ4 241 aa11.5□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms