RNA–Protein interactions for RNA: ENST00000339438.10

CSDE1-202, Transcript of cold shock domain containing E1, humanhuman

TSL 1 (best) BASIC

Gene CSDE1, Length 4,006 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-202ENST00000339438 GNPDA1P46926 289 aa5.5□□□□□ -1.53
CSDE1-202ENST00000339438 NAGLUP54802 743 aa5.5□□□□□ -1.53
CSDE1-202ENST00000339438 FASTKQ14296 549 aaKnown RBP5.5□□□□□ -1.53
CSDE1-202ENST00000339438 GRIK4Q16099 956 aa5.5□□□□□ -1.53
CSDE1-202ENST00000339438 PTCHD3Q3KNS1 767 aa5.5□□□□□ -1.53
CSDE1-202ENST00000339438 C5orf22Q49AR2 442 aa5.5□□□□□ -1.53
CSDE1-202ENST00000339438 GPAT3Q53EU6 434 aa5.5□□□□□ -1.53
CSDE1-202ENST00000339438 SDE2Q6IQ49 451 aa5.5□□□□□ -1.53
CSDE1-202ENST00000339438 DNAJC24Q6P3W2 148 aa5.5□□□□□ -1.53
CSDE1-202ENST00000339438 CNKSR3Q6P9H4 555 aa5.5□□□□□ -1.53
CSDE1-202ENST00000339438 SCARA5Q6ZMJ2 495 aa5.5□□□□□ -1.53
CSDE1-202ENST00000339438 P2RY8Q86VZ1 359 aa5.5□□□□□ -1.53
CSDE1-202ENST00000339438 RFX6Q8HWS3 928 aa5.5□□□□□ -1.53
CSDE1-202ENST00000339438 PHYKPLQ8IUZ5 450 aa5.5□□□□□ -1.53
CSDE1-202ENST00000339438 BRSK2Q8IWQ3 736 aa5.5□□□□□ -1.53
CSDE1-202ENST00000339438 CPA6Q8N4T0 437 aa5.5□□□□□ -1.53
CSDE1-202ENST00000339438 TMEM125Q96AQ2 219 aa5.5□□□□□ -1.53
CSDE1-202ENST00000339438 AGAP2Q99490 1192 aa5.5□□□□□ -1.53
CSDE1-202ENST00000339438 FAM213AQ9BRX8 229 aa5.5□□□□□ -1.53
CSDE1-202ENST00000339438 ACE2Q9BYF1 805 aaPredicted RBP5.5□□□□□ -1.53
CSDE1-202ENST00000339438 MRM3Q9HC36 420 aaKnown RBP5.5□□□□□ -1.53
CSDE1-202ENST00000339438 NRBP2Q9NSY0 501 aa5.5□□□□□ -1.53
CSDE1-202ENST00000339438 ASNSD1Q9NWL6 643 aa5.5□□□□□ -1.53
CSDE1-202ENST00000339438 WARS2Q9UGM6 360 aaKnown RBP5.5□□□□□ -1.53
CSDE1-202ENST00000339438 SCML1Q9UN30 329 aa5.5□□□□□ -1.53
CSDE1-202ENST00000339438 GRIP1Q9Y3R0 1128 aa5.5□□□□□ -1.53
CSDE1-202ENST00000339438 OAS3Q9Y6K5 1087 aaKnown RBP5.5□□□□□ -1.53
CSDE1-202ENST00000339438 MEIOCA2RUB1 952 aa5.5□□□□□ -1.53
CSDE1-202ENST00000339438 OR2A25A4D2G3 310 aa5.5□□□□□ -1.53
CSDE1-202ENST00000339438 A8MUA0 341 aa5.5□□□□□ -1.53
CSDE1-202ENST00000339438 LOC730098B7Z3J9 87 aa5.5□□□□□ -1.53
CSDE1-202ENST00000339438 H3BRB1 525 aa5.5□□□□□ -1.53
CSDE1-202ENST00000339438 K7ERI5 159 aa5.5□□□□□ -1.53
CSDE1-202ENST00000339438 OGTO15294 1046 aa5.5□□□□□ -1.53
CSDE1-202ENST00000339438 SNX2O60749 519 aa5.5□□□□□ -1.53
CSDE1-202ENST00000339438 GJB5O95377 273 aa5.5□□□□□ -1.53
CSDE1-202ENST00000339438 HPRP00739 348 aa5.5□□□□□ -1.53
CSDE1-202ENST00000339438 MT-ND1P03886 318 aa5.5□□□□□ -1.53
CSDE1-202ENST00000339438 YES1P07947 543 aa5.5□□□□□ -1.53
CSDE1-202ENST00000339438 MLNP12872 115 aa5.5□□□□□ -1.53
CSDE1-202ENST00000339438 INSRRP14616 1297 aa5.5□□□□□ -1.53
CSDE1-202ENST00000339438 MYOGP15173 224 aa5.5□□□□□ -1.53
CSDE1-202ENST00000339438 PSMA4P25789 261 aaKnown RBP5.5□□□□□ -1.53
CSDE1-202ENST00000339438 HMGCLP35914 325 aa5.5□□□□□ -1.53
CSDE1-202ENST00000339438 HYAL2Q12891 473 aa5.5□□□□□ -1.53
CSDE1-202ENST00000339438 DAG1Q14118 895 aa5.5□□□□□ -1.53
CSDE1-202ENST00000339438 BRDTQ58F21 947 aaPredicted RBP5.5□□□□□ -1.53
CSDE1-202ENST00000339438 XKR3Q5GH77 459 aa5.5□□□□□ -1.53
CSDE1-202ENST00000339438 FAM160B1Q5W0V3 765 aa5.5□□□□□ -1.53
CSDE1-202ENST00000339438 FAM124AQ86V42 546 aa5.5□□□□□ -1.53
CSDE1-202ENST00000339438 ZC3HC1Q86WB0 502 aaKnown RBP5.5□□□□□ -1.53
CSDE1-202ENST00000339438 LILRB2Q8N423 598 aa5.5□□□□□ -1.53
CSDE1-202ENST00000339438 EMC1Q8N766 993 aa5.5□□□□□ -1.53
CSDE1-202ENST00000339438 APPL2Q8NEU8 664 aa5.5□□□□□ -1.53
CSDE1-202ENST00000339438 PCDH19Q8TAB3 1148 aa5.5□□□□□ -1.53
CSDE1-202ENST00000339438 ZSCAN5AQ9BUG6 496 aa5.5□□□□□ -1.53
CSDE1-202ENST00000339438 TRAF4Q9BUZ4 470 aaPredicted RBP5.5□□□□□ -1.53
CSDE1-202ENST00000339438 DIABLOQ9NR28 239 aa5.5□□□□□ -1.53
CSDE1-202ENST00000339438 C1orf112Q9NSG2 853 aa5.5□□□□□ -1.53
CSDE1-202ENST00000339438 ANKEF1Q9NU02 776 aa5.5□□□□□ -1.53
CSDE1-202ENST00000339438 POLR3BQ9NW08 1133 aaPredicted RBP5.5□□□□□ -1.53
CSDE1-202ENST00000339438 B3GNT2Q9NY97 397 aa5.5□□□□□ -1.53
CSDE1-202ENST00000339438 COQ3Q9NZJ6 369 aa5.5□□□□□ -1.53
CSDE1-202ENST00000339438 ERVK-18Q9QC07 812 aa5.5□□□□□ -1.53
CSDE1-202ENST00000339438 CPNE7Q9UBL6 633 aa5.5□□□□□ -1.53
CSDE1-202ENST00000339438 SLC23A1Q9UHI7 598 aa5.5□□□□□ -1.53
CSDE1-202ENST00000339438 TMEFF2Q9UIK5 374 aaPredicted RBP5.5□□□□□ -1.53
CSDE1-202ENST00000339438 ADAM28Q9UKQ2 775 aa5.5□□□□□ -1.53
CSDE1-202ENST00000339438 VPS4AQ9UN37 437 aa5.5□□□□□ -1.53
CSDE1-202ENST00000339438 A0A096LPK6 155 aa5.49□□□□□ -1.53
CSDE1-202ENST00000339438 M0R082 166 aa5.49□□□□□ -1.53
CSDE1-202ENST00000339438 M0R3G1 203 aa5.49□□□□□ -1.53
CSDE1-202ENST00000339438 UBFD1O14562 309 aaKnown RBP5.49□□□□□ -1.53
CSDE1-202ENST00000339438 SEC14L5O43304 696 aa5.49□□□□□ -1.53
CSDE1-202ENST00000339438 SGTAO43765 313 aa5.49□□□□□ -1.53
CSDE1-202ENST00000339438 MOSPD3O75425 235 aa5.49□□□□□ -1.53
CSDE1-202ENST00000339438 SOAT2O75908 522 aa5.49□□□□□ -1.53
CSDE1-202ENST00000339438 LRIG2O94898 1065 aa5.49□□□□□ -1.53
CSDE1-202ENST00000339438 ALPPP05187 535 aa5.49□□□□□ -1.53
CSDE1-202ENST00000339438 CAPN1P07384 714 aa5.49□□□□□ -1.53
CSDE1-202ENST00000339438 CTSHP09668 335 aa5.49□□□□□ -1.53
CSDE1-202ENST00000339438 SLC35E2BP0CK96 405 aa5.49□□□□□ -1.53
CSDE1-202ENST00000339438 ITGA2P17301 1181 aa5.49□□□□□ -1.53
CSDE1-202ENST00000339438 DNAJB2P25686 324 aa5.49□□□□□ -1.53
CSDE1-202ENST00000339438 RYKP34925 604 aa5.49□□□□□ -1.53
CSDE1-202ENST00000339438 CDK5R2Q13319 367 aa5.49□□□□□ -1.53
CSDE1-202ENST00000339438 STARD3Q14849 445 aa5.49□□□□□ -1.53
CSDE1-202ENST00000339438 AGKQ53H12 422 aa5.49□□□□□ -1.53
CSDE1-202ENST00000339438 PRSS36Q5K4E3 855 aa5.49□□□□□ -1.53
CSDE1-202ENST00000339438 EFCAB12Q6NXP0 572 aa5.49□□□□□ -1.53
CSDE1-202ENST00000339438 LAYNQ6UX15 382 aa5.49□□□□□ -1.53
CSDE1-202ENST00000339438 ADCK1Q86TW2 530 aa5.49□□□□□ -1.53
CSDE1-202ENST00000339438 XYLT1Q86Y38 959 aa5.49□□□□□ -1.53
CSDE1-202ENST00000339438 MFSD6LQ8IWD5 586 aa5.49□□□□□ -1.53
CSDE1-202ENST00000339438 ANKRD53Q8N9V6 530 aa5.49□□□□□ -1.53
CSDE1-202ENST00000339438 MCFD2Q8NI22 146 aa5.49□□□□□ -1.53
CSDE1-202ENST00000339438 RDH11Q8TC12 318 aa5.49□□□□□ -1.53
CSDE1-202ENST00000339438 GLMNQ92990 594 aa5.49□□□□□ -1.53
CSDE1-202ENST00000339438 FUBP1Q96AE4 644 aaKnown RBP5.49□□□□□ -1.53
CSDE1-202ENST00000339438 C3orf30Q96M34 536 aa5.49□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 93 ms