RNA–Protein interactions for RNA: ENST00000339430.9

LITAF-201, Transcript of lipopolysaccharide induced TNF factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LITAF, Length 2,356 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LITAF-201ENST00000339430 B3GNT6Q6ZMB0 384 aa16.02■□□□□ 0.16
LITAF-201ENST00000339430 ZFAND4Q86XD8 727 aa16.02■□□□□ 0.16
LITAF-201ENST00000339430 TRPV3Q8NET8 790 aa16.02■□□□□ 0.16
LITAF-201ENST00000339430 PIH1D2Q8WWB5 315 aa16.02■□□□□ 0.16
LITAF-201ENST00000339430 MAGEE1Q9HCI5 957 aa16.02■□□□□ 0.16
LITAF-201ENST00000339430 ELOVL2Q9NXB9 296 aa16.02■□□□□ 0.16
LITAF-201ENST00000339430 DMTF1Q9Y222 760 aa16.02■□□□□ 0.16
LITAF-201ENST00000339430 CCL26Q9Y258 94 aa16.02■□□□□ 0.16
LITAF-201ENST00000339430 OR51B4Q9Y5P0 310 aa16.02■□□□□ 0.16
LITAF-201ENST00000339430 FFAR3O14843 346 aa16.02■□□□□ 0.15
LITAF-201ENST00000339430 GPR42O15529 346 aa16.02■□□□□ 0.15
LITAF-201ENST00000339430 SLC25A14O95258 325 aaPredicted RBP16.02■□□□□ 0.15
LITAF-201ENST00000339430 CLDN7O95471 211 aa16.02■□□□□ 0.15
LITAF-201ENST00000339430 OR4D2P58180 307 aa16.02■□□□□ 0.15
LITAF-201ENST00000339430 MTPNP58546 118 aa16.02■□□□□ 0.15
LITAF-201ENST00000339430 PRKG2Q13237 762 aa16.02■□□□□ 0.15
LITAF-201ENST00000339430 SELPLGQ14242 412 aa16.02■□□□□ 0.15
LITAF-201ENST00000339430 RFTN2Q52LD8 501 aaPredicted RBP16.02■□□□□ 0.15
LITAF-201ENST00000339430 ARHGAP15Q53QZ3 475 aa16.02■□□□□ 0.15
LITAF-201ENST00000339430 PRSS36Q5K4E3 855 aa16.02■□□□□ 0.15
LITAF-201ENST00000339430 INTS11Q5TA45 600 aaKnown RBP16.02■□□□□ 0.15
LITAF-201ENST00000339430 ADAMTSL2Q86TH1 951 aa16.02■□□□□ 0.15
LITAF-201ENST00000339430 CMTM8Q8IZV2 173 aa16.02■□□□□ 0.15
LITAF-201ENST00000339430 LEMD2Q8NC56 503 aa16.02■□□□□ 0.15
LITAF-201ENST00000339430 SMG7Q92540 1137 aaKnown RBP16.02■□□□□ 0.15
LITAF-201ENST00000339430 MRPL38Q96DV4 380 aaKnown RBP16.02■□□□□ 0.15
LITAF-201ENST00000339430 CENPNQ96H22 339 aaPredicted RBP16.02■□□□□ 0.15
LITAF-201ENST00000339430 EGFL8Q99944 293 aa16.02■□□□□ 0.15
LITAF-201ENST00000339430 TNKS2Q9H2K2 1166 aa16.02■□□□□ 0.15
LITAF-201ENST00000339430 ACTL8Q9H568 366 aa16.02■□□□□ 0.15
LITAF-201ENST00000339430 ZFYVE1Q9HBF4 777 aa16.02■□□□□ 0.15
LITAF-201ENST00000339430 PTTG2Q9NZH5 202 aa16.02■□□□□ 0.15
LITAF-201ENST00000339430 STOML2Q9UJZ1 356 aa16.02■□□□□ 0.15
LITAF-201ENST00000339430 TMCO1Q9UM00 188 aa16.02■□□□□ 0.15
LITAF-201ENST00000339430 PADI4Q9UM07 663 aa16.02■□□□□ 0.15
LITAF-201ENST00000339430 SH3BP1Q9Y3L3 701 aa16.02■□□□□ 0.15
LITAF-201ENST00000339430 TYW5A2RUC4 315 aaKnown RBP16.01■□□□□ 0.15
LITAF-201ENST00000339430 LEFTY2O00292 366 aa16.01■□□□□ 0.15
LITAF-201ENST00000339430 LSM1O15116 133 aaKnown RBP16.01■□□□□ 0.15
LITAF-201ENST00000339430 TAPBPO15533 448 aa16.01■□□□□ 0.15
LITAF-201ENST00000339430 GPIP06744 558 aa16.01■□□□□ 0.15
LITAF-201ENST00000339430 ZNF7P17097 686 aaPredicted RBP16.01■□□□□ 0.15
LITAF-201ENST00000339430 HMOX2P30519 316 aa16.01■□□□□ 0.15
LITAF-201ENST00000339430 CLCN2P51788 898 aa16.01■□□□□ 0.15
LITAF-201ENST00000339430 MAP7Q14244 749 aa16.01■□□□□ 0.15
LITAF-201ENST00000339430 PCBP2Q15366 365 aaKnown RBP eCLIP16.01■□□□□ 0.152e-14■□□□□ 8.6
LITAF-201ENST00000339430 AP5B1Q2VPB7 878 aa16.01■□□□□ 0.15
LITAF-201ENST00000339430 AP1ARQ63HQ0 302 aa16.01■□□□□ 0.15
LITAF-201ENST00000339430 CYP20A1Q6UW02 462 aa16.01■□□□□ 0.15
LITAF-201ENST00000339430 Q6ZNB5 142 aa16.01■□□□□ 0.15
LITAF-201ENST00000339430 PTRH1Q86Y79 214 aaKnown RBP16.01■□□□□ 0.15
LITAF-201ENST00000339430 CYGBQ8WWM9 190 aa16.01■□□□□ 0.15
LITAF-201ENST00000339430 ING5Q8WYH8 240 aa16.01■□□□□ 0.15
LITAF-201ENST00000339430 ALG14Q96F25 216 aa16.01■□□□□ 0.15
LITAF-201ENST00000339430 HAUS8Q9BT25 410 aa16.01■□□□□ 0.15
LITAF-201ENST00000339430 ADI1Q9BV57 179 aa16.01■□□□□ 0.15
LITAF-201ENST00000339430 RPF2Q9H7B2 306 aaKnown RBP16.01■□□□□ 0.15
LITAF-201ENST00000339430 ANAPC2Q9UJX6 822 aa16.01■□□□□ 0.15
LITAF-201ENST00000339430 LSM7Q9UK45 103 aaKnown RBP16.01■□□□□ 0.15
LITAF-201ENST00000339430 PCDHB1Q9Y5F3 818 aa16.01■□□□□ 0.15
LITAF-201ENST00000339430 REV3LO60673 3130 aa16.01■□□□□ 0.15
LITAF-201ENST00000339430 EI24O14681 340 aa16.01■□□□□ 0.15
LITAF-201ENST00000339430 RAD51BO15315 384 aa16.01■□□□□ 0.15
LITAF-201ENST00000339430 HRH2P25021 359 aa16.01■□□□□ 0.15
LITAF-201ENST00000339430 MRPL19P49406 292 aaKnown RBP16.01■□□□□ 0.15
LITAF-201ENST00000339430 KCNC3Q14003 757 aa16.01■□□□□ 0.15
LITAF-201ENST00000339430 CBX2Q14781 532 aaPredicted RBP16.01■□□□□ 0.15
LITAF-201ENST00000339430 ATP6AP1Q15904 470 aa16.01■□□□□ 0.15
LITAF-201ENST00000339430 MILR1Q7Z6M3 343 aa16.01■□□□□ 0.15
LITAF-201ENST00000339430 ZNF786Q8N393 782 aa16.01■□□□□ 0.15
LITAF-201ENST00000339430 HJURPQ8NCD3 748 aaPredicted RBP16.01■□□□□ 0.15
LITAF-201ENST00000339430 C9orf16Q9BUW7 83 aa16.01■□□□□ 0.15
LITAF-201ENST00000339430 ABCG8Q9H221 673 aa16.01■□□□□ 0.15
LITAF-201ENST00000339430 SCN8AQ9UQD0 1980 aa16.01■□□□□ 0.15
LITAF-201ENST00000339430 ACOX3O15254 700 aa16■□□□□ 0.15
LITAF-201ENST00000339430 PFKLP17858 780 aa16■□□□□ 0.15
LITAF-201ENST00000339430 DDX6P26196 483 aaKnown RBP eCLIP16■□□□□ 0.15
LITAF-201ENST00000339430 PCSK6P29122 969 aa16■□□□□ 0.15
LITAF-201ENST00000339430 HNF1BP35680 557 aa16■□□□□ 0.15
LITAF-201ENST00000339430 EEFSECP57772 596 aaKnown RBP16■□□□□ 0.15
LITAF-201ENST00000339430 EMX2Q04743 252 aa16■□□□□ 0.15
LITAF-201ENST00000339430 BCL2L1Q07817 233 aa16■□□□□ 0.15
LITAF-201ENST00000339430 MERTKQ12866 999 aa16■□□□□ 0.15
LITAF-201ENST00000339430 TRAF3Q13114 568 aa16■□□□□ 0.15
LITAF-201ENST00000339430 PHKG1Q16816 387 aa16■□□□□ 0.15
LITAF-201ENST00000339430 CHRDL2Q6WN34 429 aa16■□□□□ 0.15
LITAF-201ENST00000339430 ZNF783Q6ZMS7 281 aa16■□□□□ 0.15
LITAF-201ENST00000339430 BBS7Q8IWZ6 715 aa16■□□□□ 0.15
LITAF-201ENST00000339430 BIRC7Q96CA5 298 aa16■□□□□ 0.15
LITAF-201ENST00000339430 PDLIM5Q96HC4 596 aaKnown RBP16■□□□□ 0.15
LITAF-201ENST00000339430 FBXL20Q96IG2 436 aa16■□□□□ 0.15
LITAF-201ENST00000339430 VPS50Q96JG6 964 aa16■□□□□ 0.15
LITAF-201ENST00000339430 ZSWIM3Q96MP5 696 aa16■□□□□ 0.15
LITAF-201ENST00000339430 SOX17Q9H6I2 414 aaPredicted RBP16■□□□□ 0.15
LITAF-201ENST00000339430 IL26Q9NPH9 171 aa16■□□□□ 0.15
LITAF-201ENST00000339430 FARSBQ9NSD9 589 aaKnown RBP16■□□□□ 0.15
LITAF-201ENST00000339430 CLEC4EQ9ULY5 219 aa16■□□□□ 0.15
LITAF-201ENST00000339430 MRPS23Q9Y3D9 190 aaKnown RBP16■□□□□ 0.15
LITAF-201ENST00000339430 TNPO3Q9Y5L0 923 aaKnown RBP16■□□□□ 0.15
LITAF-201ENST00000339430 ST14Q9Y5Y6 855 aa16■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms