RNA–Protein interactions for RNA: ENST00000339162.11

PDLIM2-203, Transcript of PDZ and LIM domain 2, humanhuman

TSL 1 (best) BASIC

Gene PDLIM2, Length 2,226 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-203ENST00000339162 H2AFJQ9BTM1 129 aa21.95■■□□□ 1.1
PDLIM2-203ENST00000339162 HDAC8Q9BY41 377 aa21.95■■□□□ 1.1
PDLIM2-203ENST00000339162 ST14Q9Y5Y6 855 aa21.95■■□□□ 1.1
PDLIM2-203ENST00000339162 KRT36O76013 467 aa21.94■■□□□ 1.1
PDLIM2-203ENST00000339162 MPC1LP0DKB6 136 aa21.94■■□□□ 1.1
PDLIM2-203ENST00000339162 PRLHRP49683 370 aa21.94■■□□□ 1.1
PDLIM2-203ENST00000339162 STX1BP61266 288 aa21.94■■□□□ 1.1
PDLIM2-203ENST00000339162 ART3Q13508 389 aa21.94■■□□□ 1.1
PDLIM2-203ENST00000339162 CST6Q15828 149 aa21.94■■□□□ 1.1
PDLIM2-203ENST00000339162 XKR7Q5GH72 579 aa21.94■■□□□ 1.1
PDLIM2-203ENST00000339162 FUNDC1Q8IVP5 155 aa21.94■■□□□ 1.1
PDLIM2-203ENST00000339162 C1orf50Q9BV19 199 aa21.94■■□□□ 1.1
PDLIM2-203ENST00000339162 EFCAB1Q9HAE3 211 aa21.94■■□□□ 1.1
PDLIM2-203ENST00000339162 RNPEPL1Q9HAU8 725 aa21.94■■□□□ 1.1
PDLIM2-203ENST00000339162 GFYI3L273 518 aa21.94■■□□□ 1.1
PDLIM2-203ENST00000339162 SLCO2B1O94956 709 aa21.94■■□□□ 1.1
PDLIM2-203ENST00000339162 GPX3P22352 226 aa21.94■■□□□ 1.1
PDLIM2-203ENST00000339162 PDHA2P29803 388 aa21.94■■□□□ 1.1
PDLIM2-203ENST00000339162 MTHFRP42898 656 aa21.94■■□□□ 1.1
PDLIM2-203ENST00000339162 ABRAXAS2Q15018 415 aa21.94■■□□□ 1.1
PDLIM2-203ENST00000339162 SLC44A4Q53GD3 710 aa21.94■■□□□ 1.1
PDLIM2-203ENST00000339162 FAM46CQ5VWP2 391 aa21.94■■□□□ 1.1
PDLIM2-203ENST00000339162 UBTD2Q8WUN7 234 aa21.94■■□□□ 1.1
PDLIM2-203ENST00000339162 TMEM159Q96B96 161 aa21.94■■□□□ 1.1
PDLIM2-203ENST00000339162 MSLNLQ96KJ4 702 aa21.94■■□□□ 1.1
PDLIM2-203ENST00000339162 CCM2Q9BSQ5 444 aa21.94■■□□□ 1.1
PDLIM2-203ENST00000339162 TRIM54Q9BYV2 358 aa21.94■■□□□ 1.1
PDLIM2-203ENST00000339162 GULP1Q9UBP9 304 aa21.94■■□□□ 1.1
PDLIM2-203ENST00000339162 RNF11Q9Y3C5 154 aa21.94■■□□□ 1.1
PDLIM2-203ENST00000339162 IGLON5A6NGN9 336 aa21.93■■□□□ 1.1
PDLIM2-203ENST00000339162 LOC730098B7Z3J9 87 aa21.93■■□□□ 1.1
PDLIM2-203ENST00000339162 FBP2O00757 339 aa21.93■■□□□ 1.1
PDLIM2-203ENST00000339162 EPB42P16452 691 aa21.93■■□□□ 1.1
PDLIM2-203ENST00000339162 KIR2DL1P43626 348 aaPredicted RBP21.93■■□□□ 1.1
PDLIM2-203ENST00000339162 TAS2R38P59533 333 aa21.93■■□□□ 1.1
PDLIM2-203ENST00000339162 MMEL1Q495T6 779 aa21.93■■□□□ 1.1
PDLIM2-203ENST00000339162 PREPLQ4J6C6 727 aaPredicted RBP21.93■■□□□ 1.1
PDLIM2-203ENST00000339162 KIAA1211LQ6NV74 962 aa21.93■■□□□ 1.1
PDLIM2-203ENST00000339162 PGM2L1Q6PCE3 622 aa21.93■■□□□ 1.1
PDLIM2-203ENST00000339162 Q6ZSR9 355 aa21.93■■□□□ 1.1
PDLIM2-203ENST00000339162 NET1Q7Z628 596 aaPredicted RBP21.93■■□□□ 1.1
PDLIM2-203ENST00000339162 ADGRG6Q86SQ4 1221 aa21.93■■□□□ 1.1
PDLIM2-203ENST00000339162 TRAPPC5Q8IUR0 188 aa21.93■■□□□ 1.1
PDLIM2-203ENST00000339162 CSGALNACT1Q8TDX6 532 aa21.93■■□□□ 1.1
PDLIM2-203ENST00000339162 ATG10Q9H0Y0 220 aa21.93■■□□□ 1.1
PDLIM2-203ENST00000339162 PCDH8O95206 1070 aa21.92■■□□□ 1.1
PDLIM2-203ENST00000339162 HMOX2P30519 316 aa21.92■■□□□ 1.1
PDLIM2-203ENST00000339162 DPP6P42658 865 aa21.92■■□□□ 1.1
PDLIM2-203ENST00000339162 HTR4Q13639 388 aa21.92■■□□□ 1.1
PDLIM2-203ENST00000339162 ZRSR2Q15696 482 aaKnown RBP21.92■■□□□ 1.1
PDLIM2-203ENST00000339162 EFL1Q7Z2Z2 1120 aaKnown RBP21.92■■□□□ 1.1
PDLIM2-203ENST00000339162 RNF148Q8N7C7 305 aa21.92■■□□□ 1.1
PDLIM2-203ENST00000339162 CDRT15Q96T59 188 aa21.92■■□□□ 1.1
PDLIM2-203ENST00000339162 SLC6A17Q9H1V8 727 aa21.92■■□□□ 1.1
PDLIM2-203ENST00000339162 RSPH9Q9H1X1 276 aaPredicted RBP21.92■■□□□ 1.1
PDLIM2-203ENST00000339162 FARSBQ9NSD9 589 aaKnown RBP21.92■■□□□ 1.1
PDLIM2-203ENST00000339162 ATXN10Q9UBB4 475 aa21.92■■□□□ 1.1
PDLIM2-203ENST00000339162 TICRRQ7Z2Z1 1910 aa21.92■■□□□ 1.1
PDLIM2-203ENST00000339162 A0A1W2PP55 124 aa21.92■■□□□ 1.1
PDLIM2-203ENST00000339162 H3BQ06 376 aaPredicted RBP21.92■■□□□ 1.1
PDLIM2-203ENST00000339162 CHUKO15111 745 aa21.92■■□□□ 1.1
PDLIM2-203ENST00000339162 SYNCRIPO60506 623 aaKnown RBP21.92■■□□□ 1.1
PDLIM2-203ENST00000339162 SNRPB2P08579 225 aaKnown RBP21.92■■□□□ 1.1
PDLIM2-203ENST00000339162 PRR35P0CG20 571 aa21.92■■□□□ 1.1
PDLIM2-203ENST00000339162 EPORP19235 508 aa21.92■■□□□ 1.1
PDLIM2-203ENST00000339162 ENPP2Q13822 863 aa21.92■■□□□ 1.1
PDLIM2-203ENST00000339162 PTCHD3Q3KNS1 767 aa21.92■■□□□ 1.1
PDLIM2-203ENST00000339162 CCSMST1Q4G0I0 132 aa21.92■■□□□ 1.1
PDLIM2-203ENST00000339162 AGBL4Q5VU57 503 aa21.92■■□□□ 1.1
PDLIM2-203ENST00000339162 NLRP8Q86W28 1048 aa21.92■■□□□ 1.1
PDLIM2-203ENST00000339162 HDDC3Q8N4P3 179 aa21.92■■□□□ 1.1
PDLIM2-203ENST00000339162 MRPL1Q9BYD6 325 aaKnown RBP21.92■■□□□ 1.1
PDLIM2-203ENST00000339162 WDR41Q9HAD4 459 aa21.92■■□□□ 1.1
PDLIM2-203ENST00000339162 ZNHIT2Q9UHR6 403 aa21.92■■□□□ 1.1
PDLIM2-203ENST00000339162 TMEM98Q9Y2Y6 226 aa21.92■■□□□ 1.1
PDLIM2-203ENST00000339162 PRKAB1Q9Y478 270 aa21.92■■□□□ 1.1
PDLIM2-203ENST00000339162 MTCH2Q9Y6C9 303 aa21.92■■□□□ 1.1
PDLIM2-203ENST00000339162 PABPN1LA6NDY0 278 aaKnown RBP21.91■■□□□ 1.1
PDLIM2-203ENST00000339162 QSOX1O00391 747 aa21.91■■□□□ 1.1
PDLIM2-203ENST00000339162 ENO2P09104 434 aaPredicted RBP21.91■■□□□ 1.1
PDLIM2-203ENST00000339162 CYP2A7P20853 494 aa21.91■■□□□ 1.1
PDLIM2-203ENST00000339162 MSX2P35548 267 aaPredicted RBP21.91■■□□□ 1.1
PDLIM2-203ENST00000339162 DPTQ07507 201 aa21.91■■□□□ 1.1
PDLIM2-203ENST00000339162 CAMK2GQ13555 558 aaPredicted RBP21.91■■□□□ 1.1
PDLIM2-203ENST00000339162 RPS6KA2Q15349 733 aa21.91■■□□□ 1.1
PDLIM2-203ENST00000339162 SGO1Q5FBB7 561 aa21.91■■□□□ 1.1
PDLIM2-203ENST00000339162 EEF1AKMT2Q5JPI9 291 aaKnown RBP21.91■■□□□ 1.1
PDLIM2-203ENST00000339162 LAYNQ6UX15 382 aa21.91■■□□□ 1.1
PDLIM2-203ENST00000339162 C16orf89Q6UX73 402 aa21.91■■□□□ 1.1
PDLIM2-203ENST00000339162 MTSS1LQ765P7 747 aa21.91■■□□□ 1.1
PDLIM2-203ENST00000339162 ZNF765Q7L2R6 523 aa21.91■■□□□ 1.1
PDLIM2-203ENST00000339162 MIER2Q8N344 545 aa21.91■■□□□ 1.1
PDLIM2-203ENST00000339162 FBXW8Q8N3Y1 598 aa21.91■■□□□ 1.1
PDLIM2-203ENST00000339162 SFRP1Q8N474 314 aa21.91■■□□□ 1.1
PDLIM2-203ENST00000339162 MCOLN3Q8TDD5 553 aa21.91■■□□□ 1.1
PDLIM2-203ENST00000339162 SLC5A10A0PJK1 596 aa21.91■■□□□ 1.1
PDLIM2-203ENST00000339162 ARHGEF33A8MVX0 844 aa21.91■■□□□ 1.1
PDLIM2-203ENST00000339162 VPS4BO75351 444 aa21.91■■□□□ 1.1
PDLIM2-203ENST00000339162 WDR47O94967 919 aa21.91■■□□□ 1.1
PDLIM2-203ENST00000339162 IGFBP4P22692 258 aa21.91■■□□□ 1.1
Retrieved 100 of 20,778 RNA–protein pairs in 59.8 ms