RNA–Protein interactions for RNA: ENST00000338910.8

PSPC1-201, Transcript of paraspeckle component 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PSPC1, Length 2,407 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSPC1-201ENST00000338910 NFKBIAP25963 317 aa18.47■□□□□ 0.55
PSPC1-201ENST00000338910 GSSP48637 474 aa18.47■□□□□ 0.55
PSPC1-201ENST00000338910 FOXA1P55317 472 aa18.47■□□□□ 0.55
PSPC1-201ENST00000338910 NFKB2Q00653 900 aa18.47■□□□□ 0.55
PSPC1-201ENST00000338910 FXNQ16595 210 aa18.47■□□□□ 0.55
PSPC1-201ENST00000338910 DPY19L1Q2PZI1 675 aa18.47■□□□□ 0.55
PSPC1-201ENST00000338910 INAVAQ3KP66 663 aa18.47■□□□□ 0.55
PSPC1-201ENST00000338910 TXNDC8Q6A555 127 aa18.47■□□□□ 0.55
PSPC1-201ENST00000338910 CXorf57Q6NSI4 855 aaKnown RBP18.47■□□□□ 0.55
PSPC1-201ENST00000338910 ISCA2Q86U28 154 aa18.47■□□□□ 0.55
PSPC1-201ENST00000338910 TCEAL8Q8IYN2 117 aa18.47■□□□□ 0.55
PSPC1-201ENST00000338910 CARNMT1Q8N4J0 409 aa18.47■□□□□ 0.55
PSPC1-201ENST00000338910 ARL14EPQ8N8R7 260 aaPredicted RBP18.47■□□□□ 0.55
PSPC1-201ENST00000338910 ZFP90Q8TF47 636 aa18.47■□□□□ 0.55
PSPC1-201ENST00000338910 S100ZQ8WXG8 99 aa18.47■□□□□ 0.55
PSPC1-201ENST00000338910 RNF145Q96MT1 663 aa18.47■□□□□ 0.55
PSPC1-201ENST00000338910 CTRCQ99895 268 aa18.47■□□□□ 0.55
PSPC1-201ENST00000338910 KLHL25Q9H0H3 589 aa18.47■□□□□ 0.55
PSPC1-201ENST00000338910 RETREG1Q9H6L5 497 aa18.47■□□□□ 0.55
PSPC1-201ENST00000338910 PDE4DIPQ5VU43 2346 aa18.46■□□□□ 0.55
PSPC1-201ENST00000338910 ANAPC1Q9H1A4 1944 aa18.46■□□□□ 0.55
PSPC1-201ENST00000338910 C16orf96A6NNT2 1141 aa18.46■□□□□ 0.55
PSPC1-201ENST00000338910 H0Y626 953 aa18.46■□□□□ 0.55
PSPC1-201ENST00000338910 TBL1XO60907 577 aa18.46■□□□□ 0.55
PSPC1-201ENST00000338910 XYLBO75191 536 aa18.46■□□□□ 0.55
PSPC1-201ENST00000338910 RPP40O75818 363 aaKnown RBP18.46■□□□□ 0.55
PSPC1-201ENST00000338910 FGF18O76093 207 aa18.46■□□□□ 0.55
PSPC1-201ENST00000338910 PRSS23O95084 383 aa18.46■□□□□ 0.55
PSPC1-201ENST00000338910 WISP3O95389 354 aaPredicted RBP18.46■□□□□ 0.55
PSPC1-201ENST00000338910 EPHB3P54753 998 aa18.46■□□□□ 0.55
PSPC1-201ENST00000338910 EEFSECP57772 596 aaKnown RBP18.46■□□□□ 0.55
PSPC1-201ENST00000338910 ACVR1Q04771 509 aa18.46■□□□□ 0.55
PSPC1-201ENST00000338910 GPR158Q5T848 1215 aa18.46■□□□□ 0.55
PSPC1-201ENST00000338910 KIAA2013Q8IYS2 634 aa18.46■□□□□ 0.55
PSPC1-201ENST00000338910 C8orf59Q8N0T1 100 aaPredicted RBP18.46■□□□□ 0.55
PSPC1-201ENST00000338910 MFSD4AQ8N468 514 aa18.46■□□□□ 0.55
PSPC1-201ENST00000338910 TSPEARQ8WU66 669 aa18.46■□□□□ 0.55
PSPC1-201ENST00000338910 TUBB1Q9H4B7 451 aa18.46■□□□□ 0.55
PSPC1-201ENST00000338910 ZNF334Q9HCZ1 680 aaPredicted RBP18.46■□□□□ 0.55
PSPC1-201ENST00000338910 ANKMY1Q9P2S6 941 aa18.46■□□□□ 0.55
PSPC1-201ENST00000338910 USP22Q9UPT9 525 aa18.46■□□□□ 0.55
PSPC1-201ENST00000338910 RBMX2Q9Y388 322 aaKnown RBP18.46■□□□□ 0.55
PSPC1-201ENST00000338910 H3BMM5 538 aa18.45■□□□□ 0.54
PSPC1-201ENST00000338910 PRLP01236 227 aa18.45■□□□□ 0.54
PSPC1-201ENST00000338910 HGFP14210 728 aa18.45■□□□□ 0.54
PSPC1-201ENST00000338910 LBPP18428 481 aa18.45■□□□□ 0.54
PSPC1-201ENST00000338910 ZXDBP98169 803 aa18.45■□□□□ 0.54
PSPC1-201ENST00000338910 ZNF549Q6P9A3 640 aa18.45■□□□□ 0.54
PSPC1-201ENST00000338910 CHST9Q7L1S5 443 aa18.45■□□□□ 0.54
PSPC1-201ENST00000338910 OR4L1Q8NH43 312 aa18.45■□□□□ 0.54
PSPC1-201ENST00000338910 VPS33AQ96AX1 596 aa18.45■□□□□ 0.54
PSPC1-201ENST00000338910 CDKN2AIPNLQ96HQ2 116 aa18.45■□□□□ 0.54
PSPC1-201ENST00000338910 DGCR6LQ9BY27 220 aa18.45■□□□□ 0.54
PSPC1-201ENST00000338910 CHD7Q9P2D1 2997 aa18.45■□□□□ 0.54
PSPC1-201ENST00000338910 BAG5Q9UL15 447 aa18.45■□□□□ 0.54
PSPC1-201ENST00000338910 PCDHGA8Q9Y5G5 932 aa18.45■□□□□ 0.54
PSPC1-201ENST00000338910 CHD5Q8TDI0 1954 aa18.45■□□□□ 0.54
PSPC1-201ENST00000338910 AZIN1O14977 448 aa18.45■□□□□ 0.54
PSPC1-201ENST00000338910 EIF2S1P05198 315 aaKnown RBP18.45■□□□□ 0.54
PSPC1-201ENST00000338910 CR2P20023 1033 aa18.45■□□□□ 0.54
PSPC1-201ENST00000338910 HTR1EP28566 365 aa18.45■□□□□ 0.54
PSPC1-201ENST00000338910 MZF1P28698 734 aaPredicted RBP18.45■□□□□ 0.54
PSPC1-201ENST00000338910 GABARAPL2P60520 117 aa18.45■□□□□ 0.54
PSPC1-201ENST00000338910 ARF5P84085 180 aa18.45■□□□□ 0.54
PSPC1-201ENST00000338910 DNASE1L3Q13609 305 aa18.45■□□□□ 0.54
PSPC1-201ENST00000338910 RCAN2Q14206 197 aa18.45■□□□□ 0.54
PSPC1-201ENST00000338910 PTPRRQ15256 657 aa18.45■□□□□ 0.54
PSPC1-201ENST00000338910 RPS6KA2Q15349 733 aa18.45■□□□□ 0.54
PSPC1-201ENST00000338910 FUT11Q495W5 492 aa18.45■□□□□ 0.54
PSPC1-201ENST00000338910 PAGE3Q5JUK9 113 aa18.45■□□□□ 0.54
PSPC1-201ENST00000338910 C6orf141Q5SZD1 244 aa18.45■□□□□ 0.54
PSPC1-201ENST00000338910 KANK2Q63ZY3 851 aa18.45■□□□□ 0.54
PSPC1-201ENST00000338910 MRNIPQ6NTE8 343 aa18.45■□□□□ 0.54
PSPC1-201ENST00000338910 ARMCX6Q7L4S7 300 aa18.45■□□□□ 0.54
PSPC1-201ENST00000338910 GALNT7Q86SF2 657 aa18.45■□□□□ 0.54
PSPC1-201ENST00000338910 CHDHQ8NE62 594 aaPredicted RBP18.45■□□□□ 0.54
PSPC1-201ENST00000338910 TMBIM1Q969X1 311 aa18.45■□□□□ 0.54
PSPC1-201ENST00000338910 TUBGCP3Q96CW5 907 aa18.45■□□□□ 0.54
PSPC1-201ENST00000338910 CCDC97Q96F63 343 aaPredicted RBP18.45■□□□□ 0.54
PSPC1-201ENST00000338910 TMEM74Q96NL1 305 aa18.45■□□□□ 0.54
PSPC1-201ENST00000338910 MID1IP1Q9NPA3 183 aa18.45■□□□□ 0.54
PSPC1-201ENST00000338910 POLG2Q9UHN1 485 aa18.45■□□□□ 0.54
PSPC1-201ENST00000338910 MAGED1Q9Y5V3 778 aaPredicted RBP18.45■□□□□ 0.54
PSPC1-201ENST00000338910 GPR45Q9Y5Y3 372 aa18.45■□□□□ 0.54
PSPC1-201ENST00000338910 PTPRSQ13332 1948 aa18.45■□□□□ 0.54
PSPC1-201ENST00000338910 TOR1BO14657 336 aa18.44■□□□□ 0.54
PSPC1-201ENST00000338910 AXIN1O15169 862 aa18.44■□□□□ 0.54
PSPC1-201ENST00000338910 LILRB3O75022 631 aa18.44■□□□□ 0.54
PSPC1-201ENST00000338910 CNPP09543 421 aaKnown RBP18.44■□□□□ 0.54
PSPC1-201ENST00000338910 PPM1AP35813 382 aa18.44■□□□□ 0.54
PSPC1-201ENST00000338910 SELENBP1Q13228 472 aa18.44■□□□□ 0.54
PSPC1-201ENST00000338910 PGS1Q32NB8 556 aa18.44■□□□□ 0.54
PSPC1-201ENST00000338910 PLEKHG7Q6ZR37 379 aa18.44■□□□□ 0.54
PSPC1-201ENST00000338910 SLCO6A1Q86UG4 719 aa18.44■□□□□ 0.54
PSPC1-201ENST00000338910 PIK3C3Q8NEB9 887 aa18.44■□□□□ 0.54
PSPC1-201ENST00000338910 LPCAT1Q8NF37 534 aa18.44■□□□□ 0.54
PSPC1-201ENST00000338910 MDGA1Q8NFP4 955 aa18.44■□□□□ 0.54
PSPC1-201ENST00000338910 OR4K2Q8NGD2 314 aa18.44■□□□□ 0.54
PSPC1-201ENST00000338910 CATSPERZQ9NTU4 200 aa18.44■□□□□ 0.54
PSPC1-201ENST00000338910 ERVK-11Q9UQG0 969 aa18.44■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms