RNA–Protein interactions for RNA: ENST00000337331.9

NPHP3-201, Transcript of nephrocystin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NPHP3, Length 4,362 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP3-201ENST00000337331 TGM3Q08188 693 aa15.83■□□□□ 0.13
NPHP3-201ENST00000337331 LRRC17Q8N6Y2 441 aa15.83■□□□□ 0.13
NPHP3-201ENST00000337331 NDNFQ8TB73 568 aa15.83■□□□□ 0.13
NPHP3-201ENST00000337331 STON2Q8WXE9 905 aa15.83■□□□□ 0.13
NPHP3-201ENST00000337331 TMBIM1Q969X1 311 aa15.83■□□□□ 0.13
NPHP3-201ENST00000337331 TRNT1Q96Q11 434 aaKnown RBP15.83■□□□□ 0.13
NPHP3-201ENST00000337331 LPIN3Q9BQK8 851 aa15.83■□□□□ 0.13
NPHP3-201ENST00000337331 KRCC1Q9NPI7 259 aaPredicted RBP15.83■□□□□ 0.13
NPHP3-201ENST00000337331 INTS10Q9NVR2 710 aaKnown RBP15.83■□□□□ 0.13
NPHP3-201ENST00000337331 ANKDD1BA6NHY2 528 aa15.83■□□□□ 0.12
NPHP3-201ENST00000337331 B3GALNT1O75752 331 aa15.83■□□□□ 0.12
NPHP3-201ENST00000337331 ALDOAP04075 364 aaKnown RBP15.83■□□□□ 0.12
NPHP3-201ENST00000337331 S100A9P06702 114 aaKnown RBP15.83■□□□□ 0.12
NPHP3-201ENST00000337331 HPGDP15428 266 aa15.83■□□□□ 0.12
NPHP3-201ENST00000337331 CD40LGP29965 261 aa15.83■□□□□ 0.12
NPHP3-201ENST00000337331 CAPZA2P47755 286 aa15.83■□□□□ 0.12
NPHP3-201ENST00000337331 TAC4Q86UU9 113 aa15.83■□□□□ 0.12
NPHP3-201ENST00000337331 ANKFN1Q8N957 763 aa15.83■□□□□ 0.12
NPHP3-201ENST00000337331 SMURF2Q9HAU4 748 aa15.83■□□□□ 0.12
NPHP3-201ENST00000337331 PHLPP1O60346 1717 aa15.83■□□□□ 0.12
NPHP3-201ENST00000337331 LAMA4Q16363 1823 aa15.83■□□□□ 0.12
NPHP3-201ENST00000337331 SLC22A2O15244 555 aa15.83■□□□□ 0.12
NPHP3-201ENST00000337331 CNPP09543 421 aaKnown RBP15.83■□□□□ 0.12
NPHP3-201ENST00000337331 INTS6LQ5JSJ4 861 aaKnown RBP15.83■□□□□ 0.12
NPHP3-201ENST00000337331 DHRS4L2Q6PKH6 230 aa15.83■□□□□ 0.12
NPHP3-201ENST00000337331 TMPRSS11AQ6ZMR5 421 aa15.83■□□□□ 0.12
NPHP3-201ENST00000337331 CDK20Q8IZL9 346 aa15.83■□□□□ 0.12
NPHP3-201ENST00000337331 NIPA2Q8N8Q9 360 aa15.83■□□□□ 0.12
NPHP3-201ENST00000337331 RPL10LQ96L21 214 aaKnown RBP15.83■□□□□ 0.12
NPHP3-201ENST00000337331 SPRTNQ9H040 489 aaPredicted RBP15.83■□□□□ 0.12
NPHP3-201ENST00000337331 SNX7Q9UNH6 387 aa15.83■□□□□ 0.12
NPHP3-201ENST00000337331 OR2B3O76000 313 aa15.82■□□□□ 0.12
NPHP3-201ENST00000337331 CCNCP24863 283 aa15.82■□□□□ 0.12
NPHP3-201ENST00000337331 OR1D2P34982 312 aa15.82■□□□□ 0.12
NPHP3-201ENST00000337331 FEN1P39748 380 aaKnown RBP15.82■□□□□ 0.12
NPHP3-201ENST00000337331 CLCNKBP51801 687 aa15.82■□□□□ 0.12
NPHP3-201ENST00000337331 C6orf141Q5SZD1 244 aa15.82■□□□□ 0.12
NPHP3-201ENST00000337331 MZT2BQ6NZ67 158 aa15.82■□□□□ 0.12
NPHP3-201ENST00000337331 BTLAQ7Z6A9 289 aa15.82■□□□□ 0.12
NPHP3-201ENST00000337331 DTX3Q8N9I9 347 aa15.82■□□□□ 0.12
NPHP3-201ENST00000337331 TWIST2Q8WVJ9 160 aa15.82■□□□□ 0.12
NPHP3-201ENST00000337331 BIRC7Q96CA5 298 aa15.82■□□□□ 0.12
NPHP3-201ENST00000337331 GPR21Q99679 349 aa15.82■□□□□ 0.12
NPHP3-201ENST00000337331 QPCTLQ9NXS2 382 aa15.82■□□□□ 0.12
NPHP3-201ENST00000337331 PCDHB3Q9Y5E6 796 aa15.82■□□□□ 0.12
NPHP3-201ENST00000337331 BBIP1A8MTZ0 92 aa15.82■□□□□ 0.12
NPHP3-201ENST00000337331 ARHGEF15O94989 841 aa15.82■□□□□ 0.12
NPHP3-201ENST00000337331 DAOAP59103 153 aa15.82■□□□□ 0.12
NPHP3-201ENST00000337331 OGDHQ02218 1023 aa15.82■□□□□ 0.12
NPHP3-201ENST00000337331 KCNJ11Q14654 390 aa15.82■□□□□ 0.12
NPHP3-201ENST00000337331 ZSWIM7Q19AV6 140 aa15.82■□□□□ 0.12
NPHP3-201ENST00000337331 CMTR2Q8IYT2 770 aaKnown RBP15.82■□□□□ 0.12
NPHP3-201ENST00000337331 RBFAQ8N0V3 343 aa15.82■□□□□ 0.12
NPHP3-201ENST00000337331 FAM109AQ8N4B1 249 aa15.82■□□□□ 0.12
NPHP3-201ENST00000337331 XRN2Q9H0D6 950 aaKnown RBP eCLIP15.82■□□□□ 0.12
NPHP3-201ENST00000337331 CCNB1IP1Q9NPC3 277 aa15.82■□□□□ 0.12
NPHP3-201ENST00000337331 CCM2LQ9NUG4 571 aaPredicted RBP15.82■□□□□ 0.12
NPHP3-201ENST00000337331 ZNF541Q9H0D2 1346 aa15.82■□□□□ 0.12
NPHP3-201ENST00000337331 E9PAM4 449 aa15.82■□□□□ 0.12
NPHP3-201ENST00000337331 SLC28A1O00337 649 aa15.82■□□□□ 0.12
NPHP3-201ENST00000337331 MTRF1O75570 445 aaKnown RBP15.82■□□□□ 0.12
NPHP3-201ENST00000337331 NDST3O95803 873 aa15.82■□□□□ 0.12
NPHP3-201ENST00000337331 IL7P13232 177 aa15.82■□□□□ 0.12
NPHP3-201ENST00000337331 CES1P23141 567 aa15.82■□□□□ 0.12
NPHP3-201ENST00000337331 JAG1P78504 1218 aa15.82■□□□□ 0.12
NPHP3-201ENST00000337331 SLC39A4Q6P5W5 647 aa15.82■□□□□ 0.12
NPHP3-201ENST00000337331 FGD2Q7Z6J4 655 aa15.82■□□□□ 0.12
NPHP3-201ENST00000337331 RASAL3Q86YV0 1011 aa15.82■□□□□ 0.12
NPHP3-201ENST00000337331 IKZF3Q9UKT9 509 aa15.82■□□□□ 0.12
NPHP3-201ENST00000337331 MRPS7Q9Y2R9 242 aaKnown RBP15.82■□□□□ 0.12
NPHP3-201ENST00000337331 B8ZZF3 427 aa15.82■□□□□ 0.12
NPHP3-201ENST00000337331 USP2O75604 605 aaPredicted RBP15.82■□□□□ 0.12
NPHP3-201ENST00000337331 RPP40O75818 363 aaKnown RBP15.82■□□□□ 0.12
NPHP3-201ENST00000337331 CYP3A5P20815 502 aa15.82■□□□□ 0.12
NPHP3-201ENST00000337331 PUDPQ08623 228 aa15.82■□□□□ 0.12
NPHP3-201ENST00000337331 XKR6Q5GH73 641 aa15.82■□□□□ 0.12
NPHP3-201ENST00000337331 CHMP1BQ7LBR1 199 aa15.82■□□□□ 0.12
NPHP3-201ENST00000337331 LSM14AQ8ND56 463 aaKnown RBP15.82■□□□□ 0.12
NPHP3-201ENST00000337331 NANOGQ9H9S0 305 aa15.82■□□□□ 0.12
NPHP3-201ENST00000337331 OXSMQ9NWU1 459 aa15.82■□□□□ 0.12
NPHP3-201ENST00000337331 ADGRE2Q9UHX3 823 aa15.82■□□□□ 0.12
NPHP3-201ENST00000337331 NPEPPSL1A6NEC2 478 aa15.81■□□□□ 0.12
NPHP3-201ENST00000337331 BMP4P12644 408 aa15.81■□□□□ 0.12
NPHP3-201ENST00000337331 PRKACGP22612 351 aa15.81■□□□□ 0.12
NPHP3-201ENST00000337331 ABRQ12979 859 aa15.81■□□□□ 0.12
NPHP3-201ENST00000337331 DPYSL2Q16555 572 aa15.81■□□□□ 0.12
NPHP3-201ENST00000337331 ZNF181Q2M3W8 571 aa15.81■□□□□ 0.12
NPHP3-201ENST00000337331 PTCD2Q8WV60 388 aaKnown RBP15.81■□□□□ 0.12
NPHP3-201ENST00000337331 HEXDCQ8WVB3 486 aa15.81■□□□□ 0.12
NPHP3-201ENST00000337331 DDX1Q92499 740 aaKnown RBP15.81■□□□□ 0.12
NPHP3-201ENST00000337331 RBM4BQ9BQ04 359 aaKnown RBP15.81■□□□□ 0.12
NPHP3-201ENST00000337331 DHRS4Q9BTZ2 278 aa15.81■□□□□ 0.12
NPHP3-201ENST00000337331 RBM4Q9BWF3 364 aaKnown RBP15.81■□□□□ 0.12
NPHP3-201ENST00000337331 SLC25A51Q9H1U9 297 aa15.81■□□□□ 0.12
NPHP3-201ENST00000337331 MAGEL2Q9UJ55 1249 aa15.81■□□□□ 0.12
NPHP3-201ENST00000337331 CHRNA1P02708 482 aa15.81■□□□□ 0.12
NPHP3-201ENST00000337331 BMP2P12643 396 aa15.81■□□□□ 0.12
NPHP3-201ENST00000337331 CHRNA4P43681 627 aa15.81■□□□□ 0.12
NPHP3-201ENST00000337331 ARSFP54793 590 aa15.81■□□□□ 0.12
NPHP3-201ENST00000337331 AGAP6Q5VW22 663 aa15.81■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms